RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 DBF4Q9UBU7 674 aaPredicted RBP13.25□□□□□ -0.29
VPS72-205ENST00000491094 TERF1P54274 439 aa13.25□□□□□ -0.29
VPS72-205ENST00000491094 PPP4R3BQ5MIZ7 849 aa13.25□□□□□ -0.29
VPS72-205ENST00000491094 ERCC4Q92889 916 aaPredicted RBP13.25□□□□□ -0.29
VPS72-205ENST00000491094 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
VPS72-205ENST00000491094 MYRIPQ8NFW9 859 aa13.25□□□□□ -0.29
VPS72-205ENST00000491094 TCHHQ07283 1943 aa13.25□□□□□ -0.29
VPS72-205ENST00000491094 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
VPS72-205ENST00000491094 EVI5LQ96CN4 794 aa13.25□□□□□ -0.29
VPS72-205ENST00000491094 SLC27A2O14975 620 aa13.24□□□□□ -0.29
VPS72-205ENST00000491094 ZSCAN31Q96LW9 406 aaPredicted RBP13.24□□□□□ -0.29
VPS72-205ENST00000491094 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
VPS72-205ENST00000491094 GOLGA6L6A8MZA4 724 aa13.24□□□□□ -0.29
VPS72-205ENST00000491094 TYRO3Q06418 890 aa13.24□□□□□ -0.29
VPS72-205ENST00000491094 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
VPS72-205ENST00000491094 DNAJC25Q9H1X3 360 aa13.24□□□□□ -0.29
VPS72-205ENST00000491094 NPHP1O15259 732 aa13.24□□□□□ -0.29
VPS72-205ENST00000491094 NEUROD6Q96NK8 337 aa13.24□□□□□ -0.29
VPS72-205ENST00000491094 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
VPS72-205ENST00000491094 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
VPS72-205ENST00000491094 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
VPS72-205ENST00000491094 CLTCQ00610 1675 aaKnown RBP13.23□□□□□ -0.29
VPS72-205ENST00000491094 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
VPS72-205ENST00000491094 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
VPS72-205ENST00000491094 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
VPS72-205ENST00000491094 PSMA5P28066 241 aa13.23□□□□□ -0.29
VPS72-205ENST00000491094 ZC3H6P61129 1189 aaKnown RBP13.23□□□□□ -0.29
VPS72-205ENST00000491094 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
VPS72-205ENST00000491094 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
VPS72-205ENST00000491094 RNF20Q5VTR2 975 aa13.23□□□□□ -0.29
VPS72-205ENST00000491094 SH2B1Q9NRF2 756 aaPredicted RBP13.23□□□□□ -0.29
VPS72-205ENST00000491094 SASH1O94885 1247 aa13.23□□□□□ -0.29
VPS72-205ENST00000491094 HMGN5P82970 282 aaKnown RBP13.23□□□□□ -0.29
VPS72-205ENST00000491094 PHF8Q9UPP1 1060 aa13.23□□□□□ -0.29
VPS72-205ENST00000491094 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
VPS72-205ENST00000491094 CCT2P78371 535 aaKnown RBP13.22□□□□□ -0.29
VPS72-205ENST00000491094 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 MYD88Q99836 296 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 KCNF1Q9H3M0 494 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 AOX1Q06278 1338 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 GRM8O00222 908 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 NECTIN1Q15223 517 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
VPS72-205ENST00000491094 FILIP1Q7Z7B0 1213 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 USP31Q70CQ4 1352 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 FTOQ9C0B1 505 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■■■□□ 16.5
VPS72-205ENST00000491094 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
VPS72-205ENST00000491094 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
VPS72-205ENST00000491094 NR1I2O75469 434 aa13.21□□□□□ -0.29
VPS72-205ENST00000491094 ZNF165P49910 485 aa13.21□□□□□ -0.29
VPS72-205ENST00000491094 TTC41PQ6P2S7 1318 aa13.21□□□□□ -0.29
VPS72-205ENST00000491094 FAM200AQ8TCP9 573 aa13.21□□□□□ -0.29
VPS72-205ENST00000491094 CBX8Q9HC52 389 aa13.21□□□□□ -0.29
VPS72-205ENST00000491094 REREQ9P2R6 1566 aa13.21□□□□□ -0.3
VPS72-205ENST00000491094 NAA30Q147X3 362 aaPredicted RBP13.21□□□□□ -0.3
VPS72-205ENST00000491094 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.3
VPS72-205ENST00000491094 BRF1Q92994 677 aa13.21□□□□□ -0.3
VPS72-205ENST00000491094 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.3
VPS72-205ENST00000491094 KDRP35968 1356 aa13.21□□□□□ -0.3
VPS72-205ENST00000491094 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 ERC1Q8IUD2 1116 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 GOLGA6L19H0YKK7 550 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 PDCP20941 246 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 PDCL2Q8N4E4 241 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 TRMT1Q9NXH9 659 aaKnown RBP13.2□□□□□ -0.3
VPS72-205ENST00000491094 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS72-205ENST00000491094 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
VPS72-205ENST00000491094 TPD52L1Q16890 204 aaPredicted RBP13.2□□□□□ -0.3
VPS72-205ENST00000491094 COPS6Q7L5N1 327 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
VPS72-205ENST00000491094 BECN2A8MW95 431 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
VPS72-205ENST00000491094 U2AF2P26368 475 aaKnown RBP eCLIP13.19□□□□□ -0.34e-7■■■□□ 15.2
VPS72-205ENST00000491094 PRIMPOLQ96LW4 560 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
VPS72-205ENST00000491094 KIAA1524Q8TCG1 905 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 Q6ZUG5 572 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 XAGE3Q8WTP9 111 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
VPS72-205ENST00000491094 IP6K1Q92551 441 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 MAP4K1Q92918 833 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 SYTL4Q96C24 671 aaPredicted RBP13.19□□□□□ -0.3
VPS72-205ENST00000491094 ADAMTS13Q76LX8 1427 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 ADCY9O60503 1353 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
VPS72-205ENST00000491094 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 MTERF4Q7Z6M4 381 aaKnown RBP13.19□□□□□ -0.3
VPS72-205ENST00000491094 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
VPS72-205ENST00000491094 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
VPS72-205ENST00000491094 ARID5BQ14865 1188 aa13.18□□□□□ -0.3
VPS72-205ENST00000491094 RICTORQ6R327 1708 aa13.18□□□□□ -0.3
VPS72-205ENST00000491094 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
VPS72-205ENST00000491094 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
VPS72-205ENST00000491094 NCOA5Q9HCD5 579 aaKnown RBP13.18□□□□□ -0.3
VPS72-205ENST00000491094 TNNT1P13805 278 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms