RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 ALDH1B1P30837 517 aa20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 EPS15P42566 896 aa20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 SCNN1DP51172 638 aa20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 CYP4F22Q6NT55 531 aa20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 CCER1Q8TC90 406 aaPredicted RBP20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 CAPNS2Q96L46 248 aa20.5■□□□□ 0.87
SCAMP3-208ENST00000490999 LAMB4A4D0S4 1761 aa20.49■□□□□ 0.87
SCAMP3-208ENST00000490999 TCERG1O14776 1098 aaKnown RBP20.49■□□□□ 0.87
SCAMP3-208ENST00000490999 EIF6P56537 245 aaKnown RBP20.49■□□□□ 0.87
SCAMP3-208ENST00000490999 CRY2Q49AN0 593 aa20.49■□□□□ 0.87
SCAMP3-208ENST00000490999 MIS18AQ9NYP9 233 aa20.49■□□□□ 0.87
SCAMP3-208ENST00000490999 LARGE2Q8N3Y3 721 aa20.48■□□□□ 0.87
SCAMP3-208ENST00000490999 CCDC85CA6NKD9 419 aa20.47■□□□□ 0.87
SCAMP3-208ENST00000490999 U2AF1L5P0DN76 240 aaPredicted RBP20.47■□□□□ 0.87
SCAMP3-208ENST00000490999 GPTP24298 496 aa20.47■□□□□ 0.87
SCAMP3-208ENST00000490999 U2AF1Q01081 240 aaKnown RBP eCLIP20.47■□□□□ 0.87
SCAMP3-208ENST00000490999 RPGRQ92834 1020 aaKnown RBP20.47■□□□□ 0.87
SCAMP3-208ENST00000490999 UBN2Q6ZU65 1347 aa20.47■□□□□ 0.87
SCAMP3-208ENST00000490999 RIC1Q4ADV7 1423 aa20.46■□□□□ 0.87
SCAMP3-208ENST00000490999 AOC2O75106 756 aa20.46■□□□□ 0.87
SCAMP3-208ENST00000490999 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
SCAMP3-208ENST00000490999 PPEF1O14829 653 aaPredicted RBP20.45■□□□□ 0.86
SCAMP3-208ENST00000490999 RGL2O15211 777 aa20.45■□□□□ 0.86
SCAMP3-208ENST00000490999 CST9Q5W186 159 aa20.45■□□□□ 0.86
SCAMP3-208ENST00000490999 TTLL7Q6ZT98 887 aa20.45■□□□□ 0.86
SCAMP3-208ENST00000490999 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
SCAMP3-208ENST00000490999 GPR101Q96P66 508 aaPredicted RBP20.45■□□□□ 0.86
SCAMP3-208ENST00000490999 BEGAINQ9BUH8 593 aa20.44■□□□□ 0.86
SCAMP3-208ENST00000490999 NYXQ9GZU5 481 aa20.44■□□□□ 0.86
SCAMP3-208ENST00000490999 ZBTB3Q9H5J0 574 aa20.44■□□□□ 0.86
SCAMP3-208ENST00000490999 ECE1P42892 770 aa20.43■□□□□ 0.86
SCAMP3-208ENST00000490999 AOC3Q16853 763 aa20.42■□□□□ 0.86
SCAMP3-208ENST00000490999 NIM1KQ8IY84 436 aa20.42■□□□□ 0.86
SCAMP3-208ENST00000490999 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
SCAMP3-208ENST00000490999 TLL2Q9Y6L7 1015 aa20.42■□□□□ 0.86
SCAMP3-208ENST00000490999 MAP3K15Q6ZN16 1313 aa20.42■□□□□ 0.86
SCAMP3-208ENST00000490999 PPIP5K2O43314 1243 aa20.41■□□□□ 0.86
SCAMP3-208ENST00000490999 MYL6BP14649 208 aa20.41■□□□□ 0.86
SCAMP3-208ENST00000490999 HOXA10P31260 410 aaPredicted RBP20.41■□□□□ 0.86
SCAMP3-208ENST00000490999 SUSD4Q5VX71 490 aa20.41■□□□□ 0.86
SCAMP3-208ENST00000490999 CC2D2BQ6DHV5 1058 aa20.41■□□□□ 0.86
SCAMP3-208ENST00000490999 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
SCAMP3-208ENST00000490999 USP50Q70EL3 339 aaPredicted RBP20.41■□□□□ 0.86
SCAMP3-208ENST00000490999 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
SCAMP3-208ENST00000490999 MLLT1Q03111 559 aaPredicted RBP20.4■□□□□ 0.86
SCAMP3-208ENST00000490999 CFAP44Q96MT7 982 aa20.4■□□□□ 0.86
SCAMP3-208ENST00000490999 IBTKQ9P2D0 1353 aaPredicted RBP20.4■□□□□ 0.86
SCAMP3-208ENST00000490999 KDM3BQ7LBC6 1761 aa20.39■□□□□ 0.86
SCAMP3-208ENST00000490999 NTSR2O95665 410 aa20.39■□□□□ 0.85
SCAMP3-208ENST00000490999 TAF7Q15545 349 aaPredicted RBP20.39■□□□□ 0.85
SCAMP3-208ENST00000490999 RBM17Q96I25 401 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-208ENST00000490999 GLIS2Q9BZE0 524 aaPredicted RBP20.39■□□□□ 0.85
SCAMP3-208ENST00000490999 ERVV-1B6SEH8 477 aa20.38■□□□□ 0.85
SCAMP3-208ENST00000490999 CELF2O95319 508 aaKnown RBP20.38■□□□□ 0.85
SCAMP3-208ENST00000490999 THUMPD2Q9BTF0 503 aaKnown RBP20.38■□□□□ 0.85
SCAMP3-208ENST00000490999 ZNF408Q9H9D4 720 aa20.38■□□□□ 0.85
SCAMP3-208ENST00000490999 GPRC5DQ9NZD1 345 aa20.38■□□□□ 0.85
SCAMP3-208ENST00000490999 NUP98P52948 1817 aa20.38■□□□□ 0.85
SCAMP3-208ENST00000490999 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
SCAMP3-208ENST00000490999 GMPSP49915 693 aaPredicted RBP20.37■□□□□ 0.85
SCAMP3-208ENST00000490999 ADARB2Q9NS39 739 aaKnown RBP20.37■□□□□ 0.85
SCAMP3-208ENST00000490999 TRPM7Q96QT4 1865 aa20.37■□□□□ 0.85
SCAMP3-208ENST00000490999 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
SCAMP3-208ENST00000490999 SAPCD2Q86UD0 394 aa20.36■□□□□ 0.85
SCAMP3-208ENST00000490999 CRAMP1Q96RY5 1269 aa20.36■□□□□ 0.85
SCAMP3-208ENST00000490999 MCOLN1Q9GZU1 580 aa20.36■□□□□ 0.85
SCAMP3-208ENST00000490999 ABCC4O15439 1325 aa20.35■□□□□ 0.85
SCAMP3-208ENST00000490999 CXCL9Q07325 125 aa20.35■□□□□ 0.85
SCAMP3-208ENST00000490999 EIF4A1P60842 406 aaKnown RBP20.34■□□□□ 0.85
SCAMP3-208ENST00000490999 ZNF34Q8IZ26 560 aa20.34■□□□□ 0.85
SCAMP3-208ENST00000490999 SHTN1A0MZ66 631 aa20.33■□□□□ 0.85
SCAMP3-208ENST00000490999 MAP2K2P36507 400 aa20.33■□□□□ 0.85
SCAMP3-208ENST00000490999 GRIPAP1Q4V328 841 aa20.33■□□□□ 0.85
SCAMP3-208ENST00000490999 TRPM4Q8TD43 1214 aa20.33■□□□□ 0.85
SCAMP3-208ENST00000490999 ATP6V0A2Q9Y487 856 aa20.33■□□□□ 0.85
SCAMP3-208ENST00000490999 RAD17O75943 681 aa20.32■□□□□ 0.84
SCAMP3-208ENST00000490999 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
SCAMP3-208ENST00000490999 ZNRF3Q9ULT6 936 aa20.32■□□□□ 0.84
SCAMP3-208ENST00000490999 TNRC18O15417 2968 aaPredicted RBP20.31■□□□□ 0.84
SCAMP3-208ENST00000490999 RGS19P49795 217 aa20.31■□□□□ 0.84
SCAMP3-208ENST00000490999 DLK2Q6UY11 383 aa20.31■□□□□ 0.84
SCAMP3-208ENST00000490999 ZIC5Q96T25 663 aa20.31■□□□□ 0.84
SCAMP3-208ENST00000490999 HIRAP54198 1017 aaPredicted RBP20.3■□□□□ 0.84
SCAMP3-208ENST00000490999 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
SCAMP3-208ENST00000490999 DPP8Q6V1X1 898 aaPredicted RBP20.3■□□□□ 0.84
SCAMP3-208ENST00000490999 GIGYF2Q6Y7W6 1299 aaKnown RBP20.3■□□□□ 0.84
SCAMP3-208ENST00000490999 PNISRQ8TF01 805 aaKnown RBP20.3■□□□□ 0.84
SCAMP3-208ENST00000490999 NLRP3Q96P20 1036 aa20.3■□□□□ 0.84
SCAMP3-208ENST00000490999 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
SCAMP3-208ENST00000490999 TMX4Q9H1E5 349 aaPredicted RBP20.3■□□□□ 0.84
SCAMP3-208ENST00000490999 ANXA1P04083 346 aa20.29■□□□□ 0.84
SCAMP3-208ENST00000490999 DGKZQ13574 1117 aa20.29■□□□□ 0.84
SCAMP3-208ENST00000490999 PROSER3Q2NL68 480 aa20.29■□□□□ 0.84
SCAMP3-208ENST00000490999 PPP1R42Q7Z4L9 355 aa20.29■□□□□ 0.84
SCAMP3-208ENST00000490999 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
SCAMP3-208ENST00000490999 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
SCAMP3-208ENST00000490999 DUOX1Q9NRD9 1551 aa20.29■□□□□ 0.84
SCAMP3-208ENST00000490999 CA12O43570 354 aa20.28■□□□□ 0.84
SCAMP3-208ENST00000490999 UTP14AQ9BVJ6 771 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms