RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
SRRM1-217ENST00000490543 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
SRRM1-217ENST00000490543 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
SRRM1-217ENST00000490543 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
SRRM1-217ENST00000490543 RABGEF1Q9UJ41 708 aa12.44□□□□□ -0.42
SRRM1-217ENST00000490543 ANKRD26Q9UPS8 1709 aa12.43□□□□□ -0.42
SRRM1-217ENST00000490543 PTCD1O75127 700 aaKnown RBP12.43□□□□□ -0.42
SRRM1-217ENST00000490543 FSTL1Q12841 308 aa12.43□□□□□ -0.42
SRRM1-217ENST00000490543 DALRD3Q5D0E6 543 aaKnown RBP12.43□□□□□ -0.42
SRRM1-217ENST00000490543 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
SRRM1-217ENST00000490543 CABP4P57796 275 aa12.42□□□□□ -0.42
SRRM1-217ENST00000490543 KDM6AO15550 1401 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-217ENST00000490543 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-217ENST00000490543 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
SRRM1-217ENST00000490543 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
SRRM1-217ENST00000490543 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
SRRM1-217ENST00000490543 PLEKHG2Q9H7P9 1386 aa12.41□□□□□ -0.42
SRRM1-217ENST00000490543 USP42Q9H9J4 1324 aaKnown RBP12.4□□□□□ -0.42
SRRM1-217ENST00000490543 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.42
SRRM1-217ENST00000490543 OSBPP22059 807 aa12.4□□□□□ -0.42
SRRM1-217ENST00000490543 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
SRRM1-217ENST00000490543 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
SRRM1-217ENST00000490543 NFATC2IPQ8NCF5 419 aa12.4□□□□□ -0.42
SRRM1-217ENST00000490543 ZNF831Q5JPB2 1677 aa12.4□□□□□ -0.42
SRRM1-217ENST00000490543 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
SRRM1-217ENST00000490543 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
SRRM1-217ENST00000490543 TM4SF1P30408 202 aa12.39□□□□□ -0.43
SRRM1-217ENST00000490543 PRELPP51888 382 aa12.39□□□□□ -0.43
SRRM1-217ENST00000490543 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
SRRM1-217ENST00000490543 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
SRRM1-217ENST00000490543 TNS4Q8IZW8 715 aa12.39□□□□□ -0.43
SRRM1-217ENST00000490543 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
SRRM1-217ENST00000490543 SBF1O95248 1867 aa12.39□□□□□ -0.43
SRRM1-217ENST00000490543 PCNTO95613 3336 aa12.38□□□□□ -0.43
SRRM1-217ENST00000490543 TRIM6-TRIM34B2RNG4 842 aa12.38□□□□□ -0.43
SRRM1-217ENST00000490543 MTHFSP49914 203 aa12.38□□□□□ -0.43
SRRM1-217ENST00000490543 RASSF7Q02833 373 aa12.38□□□□□ -0.43
SRRM1-217ENST00000490543 SMC1BQ8NDV3 1235 aa12.37□□□□□ -0.43
SRRM1-217ENST00000490543 AMOTQ4VCS5 1084 aa12.36□□□□□ -0.43
SRRM1-217ENST00000490543 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
SRRM1-217ENST00000490543 DNAJC10Q8IXB1 793 aa12.36□□□□□ -0.43
SRRM1-217ENST00000490543 WNT2BQ93097 391 aa12.36□□□□□ -0.43
SRRM1-217ENST00000490543 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
SRRM1-217ENST00000490543 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
SRRM1-217ENST00000490543 GLTPD2A6NH11 291 aa12.34□□□□□ -0.43
SRRM1-217ENST00000490543 ZPR1O75312 459 aa12.34□□□□□ -0.43
SRRM1-217ENST00000490543 HSPA1AP0DMV8 641 aaKnown RBP12.34□□□□□ -0.43
SRRM1-217ENST00000490543 HSPA1BP0DMV9 641 aaKnown RBP12.34□□□□□ -0.43
SRRM1-217ENST00000490543 VEGFAP15692 232 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-217ENST00000490543 MLLT3P42568 568 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-217ENST00000490543 PTPN5P54829 565 aa12.34□□□□□ -0.43
SRRM1-217ENST00000490543 NFIXQ14938 502 aa12.34□□□□□ -0.43
SRRM1-217ENST00000490543 C1orf141Q5JVX7 400 aa12.34□□□□□ -0.43
SRRM1-217ENST00000490543 CDHR5Q9HBB8 845 aa12.34□□□□□ -0.43
SRRM1-217ENST00000490543 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
SRRM1-217ENST00000490543 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
SRRM1-217ENST00000490543 TJP1Q07157 1748 aa12.34□□□□□ -0.43
SRRM1-217ENST00000490543 POTECB2RU33 542 aa12.33□□□□□ -0.44
SRRM1-217ENST00000490543 LMNB1P20700 586 aa12.33□□□□□ -0.44
SRRM1-217ENST00000490543 SULT6B1Q6IMI4 303 aa12.33□□□□□ -0.44
SRRM1-217ENST00000490543 LAPTM4BQ86VI4 370 aa12.33□□□□□ -0.44
SRRM1-217ENST00000490543 SEPT9Q9UHD8 586 aaPredicted RBP12.33□□□□□ -0.44
SRRM1-217ENST00000490543 TSKSQ9UJT2 592 aa12.33□□□□□ -0.44
SRRM1-217ENST00000490543 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
SRRM1-217ENST00000490543 CYP19A1P11511 503 aaPredicted RBP12.32□□□□□ -0.44
SRRM1-217ENST00000490543 SLC39A6Q13433 755 aa12.32□□□□□ -0.44
SRRM1-217ENST00000490543 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
SRRM1-217ENST00000490543 NARFQ9UHQ1 456 aa12.32□□□□□ -0.44
SRRM1-217ENST00000490543 ZC3H4Q9UPT8 1303 aaKnown RBP12.32□□□□□ -0.44
SRRM1-217ENST00000490543 NFKBIEO00221 500 aa12.31□□□□□ -0.44
SRRM1-217ENST00000490543 SERPINB2P05120 415 aa12.31□□□□□ -0.44
SRRM1-217ENST00000490543 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
SRRM1-217ENST00000490543 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
SRRM1-217ENST00000490543 PANK3Q9H999 370 aa12.31□□□□□ -0.44
SRRM1-217ENST00000490543 AFDNP55196 1824 aaKnown RBP12.3□□□□□ -0.44
SRRM1-217ENST00000490543 PRSS12P56730 875 aa12.3□□□□□ -0.44
SRRM1-217ENST00000490543 C2CD5Q86YS7 1000 aa12.3□□□□□ -0.44
SRRM1-217ENST00000490543 ZBTB1Q9Y2K1 713 aa12.3□□□□□ -0.44
SRRM1-217ENST00000490543 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
SRRM1-217ENST00000490543 CCDC88AQ3V6T2 1871 aa12.29□□□□□ -0.44
SRRM1-217ENST00000490543 IL13P35225 146 aa12.29□□□□□ -0.44
SRRM1-217ENST00000490543 ANKK1Q8NFD2 765 aa12.29□□□□□ -0.44
SRRM1-217ENST00000490543 ZFRQ96KR1 1074 aaKnown RBP12.29□□□□□ -0.44
SRRM1-217ENST00000490543 SLC52A2Q9HAB3 445 aa12.29□□□□□ -0.44
SRRM1-217ENST00000490543 COL15A1P39059 1388 aa12.29□□□□□ -0.44
SRRM1-217ENST00000490543 H0YIN7 160 aa12.28□□□□□ -0.44
SRRM1-217ENST00000490543 AKAP4Q5JQC9 854 aa12.28□□□□□ -0.44
SRRM1-217ENST00000490543 BICDL1Q6ZP65 573 aa12.28□□□□□ -0.44
SRRM1-217ENST00000490543 MORC1Q86VD1 984 aa12.28□□□□□ -0.44
SRRM1-217ENST00000490543 PACS2Q86VP3 889 aa12.28□□□□□ -0.44
SRRM1-217ENST00000490543 FAM198AQ9UFP1 575 aa12.28□□□□□ -0.44
SRRM1-217ENST00000490543 NRXN2Q9P2S2 1712 aa12.28□□□□□ -0.44
SRRM1-217ENST00000490543 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
SRRM1-217ENST00000490543 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
SRRM1-217ENST00000490543 CANXP27824 592 aaKnown RBP12.27□□□□□ -0.45
SRRM1-217ENST00000490543 CCDC24Q8N4L8 307 aa12.27□□□□□ -0.45
SRRM1-217ENST00000490543 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
SRRM1-217ENST00000490543 C21orf2O43822 256 aa12.26□□□□□ -0.45
SRRM1-217ENST00000490543 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.451e-14■■■□□ 15.4
SRRM1-217ENST00000490543 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms