RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 KCNC4Q03721 635 aa10.15□□□□□ -0.78
PDLIM1-203ENST00000490391 HSP90AB2PQ58FF8 381 aa10.15□□□□□ -0.78
PDLIM1-203ENST00000490391 NYAP1Q6ZVC0 841 aa10.15□□□□□ -0.78
PDLIM1-203ENST00000490391 ADAMTSL1Q8N6G6 1762 aa10.14□□□□□ -0.79
PDLIM1-203ENST00000490391 MAP2K1Q02750 393 aaPredicted RBP10.14□□□□□ -0.79
PDLIM1-203ENST00000490391 CUL9Q8IWT3 2517 aa10.14□□□□□ -0.79
PDLIM1-203ENST00000490391 A0A0C4DFX4 3053 aa10.14□□□□□ -0.79
PDLIM1-203ENST00000490391 ROCK2O75116 1388 aaKnown RBP10.14□□□□□ -0.79
PDLIM1-203ENST00000490391 LTBP1Q14766 1721 aa10.13□□□□□ -0.79
PDLIM1-203ENST00000490391 SCN4AP35499 1836 aa10.13□□□□□ -0.79
PDLIM1-203ENST00000490391 LDHDQ86WU2 507 aa10.13□□□□□ -0.79
PDLIM1-203ENST00000490391 FLT4P35916 1363 aa10.13□□□□□ -0.79
PDLIM1-203ENST00000490391 WDR33Q9C0J8 1336 aaKnown RBP10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 DDNO94850 711 aaPredicted RBP10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 DEFB115Q30KQ5 88 aa10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 TTLL6Q8N841 843 aa10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 ZDHHC16Q969W1 377 aa10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 TONSLQ96HA7 1378 aa10.12□□□□□ -0.79
PDLIM1-203ENST00000490391 SOWAHBA6NEL2 793 aa10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 PHKG2P15735 406 aa10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 BCAMP50895 628 aa10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 ERFEQ4G0M1 354 aa10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 MCOLN1Q9GZU1 580 aa10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 TAF1DQ9H5J8 278 aaPredicted RBP10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 SPG7Q9UQ90 795 aa10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 CASP8AP2Q9UKL3 1982 aa10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 KIF24Q5T7B8 1368 aa10.11□□□□□ -0.79
PDLIM1-203ENST00000490391 TJP1Q07157 1748 aa10.1□□□□□ -0.79
PDLIM1-203ENST00000490391 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1-203ENST00000490391 CRKLP46109 303 aaKnown RBP10.1□□□□□ -0.79
PDLIM1-203ENST00000490391 PUS7Q96PZ0 661 aaKnown RBP10.1□□□□□ -0.79
PDLIM1-203ENST00000490391 CARMIL3Q8ND23 1372 aa10.1□□□□□ -0.79
PDLIM1-203ENST00000490391 MKI67P46013 3256 aaKnown RBP10.09□□□□□ -0.79
PDLIM1-203ENST00000490391 LTBP3Q9NS15 1303 aa10.09□□□□□ -0.79
PDLIM1-203ENST00000490391 IQCA1LA6NCM1 817 aa10.09□□□□□ -0.79
PDLIM1-203ENST00000490391 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
PDLIM1-203ENST00000490391 IFNL2Q8IZJ0 200 aa10.09□□□□□ -0.79
PDLIM1-203ENST00000490391 CFAP44Q96MT7 982 aa10.09□□□□□ -0.79
PDLIM1-203ENST00000490391 ANKRD31Q8N7Z5 1873 aa10.08□□□□□ -0.8
PDLIM1-203ENST00000490391 COL11A2P13942 1736 aaPredicted RBP10.08□□□□□ -0.8
PDLIM1-203ENST00000490391 SZT2Q5T011 3432 aa10.08□□□□□ -0.8
PDLIM1-203ENST00000490391 FYB1O15117 783 aa10.08□□□□□ -0.8
PDLIM1-203ENST00000490391 NFIXQ14938 502 aa10.08□□□□□ -0.8
PDLIM1-203ENST00000490391 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
PDLIM1-203ENST00000490391 ANKRD26Q9UPS8 1709 aa10.07□□□□□ -0.8
PDLIM1-203ENST00000490391 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
PDLIM1-203ENST00000490391 C2CD5Q86YS7 1000 aa10.07□□□□□ -0.8
PDLIM1-203ENST00000490391 GGNBP2Q9H3C7 697 aa10.07□□□□□ -0.8
PDLIM1-203ENST00000490391 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
PDLIM1-203ENST00000490391 PPP1R3GB7ZBB8 358 aa10.06□□□□□ -0.8
PDLIM1-203ENST00000490391 NRG2O14511 850 aaPredicted RBP10.06□□□□□ -0.8
PDLIM1-203ENST00000490391 USPL1Q5W0Q7 1092 aa10.06□□□□□ -0.8
PDLIM1-203ENST00000490391 INTS5Q6P9B9 1019 aaKnown RBP10.06□□□□□ -0.8
PDLIM1-203ENST00000490391 CAPNS2Q96L46 248 aa10.06□□□□□ -0.8
PDLIM1-203ENST00000490391 H0YIN7 160 aa10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 RGL2O15211 777 aa10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 C21orf2O43822 256 aa10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 SERPINB2P05120 415 aa10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 MAP1SQ66K74 1059 aaPredicted RBP10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 CNTROBQ8N137 903 aa10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 GPR101Q96P66 508 aaPredicted RBP10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 TAOK3Q9H2K8 898 aa10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 ABT1Q9ULW3 272 aaKnown RBP10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 EMILIN1Q9Y6C2 1016 aa10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 SOS1Q07889 1333 aaPredicted RBP10.05□□□□□ -0.8
PDLIM1-203ENST00000490391 PTCD1O75127 700 aaKnown RBP10.04□□□□□ -0.8
PDLIM1-203ENST00000490391 EAPPQ56P03 285 aaPredicted RBP10.04□□□□□ -0.8
PDLIM1-203ENST00000490391 ZNF787Q6DD87 383 aa10.04□□□□□ -0.8
PDLIM1-203ENST00000490391 CYP4F22Q6NT55 531 aa10.04□□□□□ -0.8
PDLIM1-203ENST00000490391 EYA1Q99502 592 aa10.04□□□□□ -0.8
PDLIM1-203ENST00000490391 BEGAINQ9BUH8 593 aa10.04□□□□□ -0.8
PDLIM1-203ENST00000490391 SLX4Q8IY92 1834 aa10.04□□□□□ -0.8
PDLIM1-203ENST00000490391 ZNF541Q9H0D2 1346 aa10.04□□□□□ -0.8
PDLIM1-203ENST00000490391 KIF20BQ96Q89 1820 aa10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 EVI5O60447 810 aa10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 ZPR1O75312 459 aa10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 ECE1P42892 770 aa10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 DGKZQ13574 1117 aa10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 ZFRQ96KR1 1074 aaKnown RBP10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 DDX21Q9NR30 783 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 NARFQ9UHQ1 456 aa10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 HACL1Q9UJ83 578 aa10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 ARFGEF2Q9Y6D5 1785 aa10.03□□□□□ -0.8
PDLIM1-203ENST00000490391 AOC2O75106 756 aa10.02□□□□□ -0.81
PDLIM1-203ENST00000490391 EPHX2P34913 555 aa10.02□□□□□ -0.81
PDLIM1-203ENST00000490391 MAP2K2P36507 400 aa10.02□□□□□ -0.81
PDLIM1-203ENST00000490391 SOX10P56693 466 aa10.02□□□□□ -0.81
PDLIM1-203ENST00000490391 FMR1Q06787 632 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDLIM1-203ENST00000490391 TESK2Q96S53 571 aa10.02□□□□□ -0.81
PDLIM1-203ENST00000490391 CACNA1SQ13698 1873 aa10.02□□□□□ -0.81
PDLIM1-203ENST00000490391 TRPM7Q96QT4 1865 aa10.02□□□□□ -0.81
PDLIM1-203ENST00000490391 COL15A1P39059 1388 aa10.01□□□□□ -0.81
PDLIM1-203ENST00000490391 CA12O43570 354 aa10.01□□□□□ -0.81
PDLIM1-203ENST00000490391 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
PDLIM1-203ENST00000490391 RNF123Q5XPI4 1314 aa10.01□□□□□ -0.81
PDLIM1-203ENST00000490391 WASHC2AQ641Q2 1341 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms