RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 RIC1Q4ADV7 1423 aa26.23■■□□□ 1.79
UPK3B-205ENST00000490360 HOXA10P31260 410 aaPredicted RBP26.23■■□□□ 1.79
UPK3B-205ENST00000490360 RPGRQ92834 1020 aaKnown RBP26.23■■□□□ 1.79
UPK3B-205ENST00000490360 BEGAINQ9BUH8 593 aa26.23■■□□□ 1.79
UPK3B-205ENST00000490360 ABHD8Q96I13 439 aa26.22■■□□□ 1.79
UPK3B-205ENST00000490360 GJA3Q9Y6H8 435 aa26.22■■□□□ 1.79
UPK3B-205ENST00000490360 LAMB4A4D0S4 1761 aa26.22■■□□□ 1.79
UPK3B-205ENST00000490360 IBTKQ9P2D0 1353 aaPredicted RBP26.21■■□□□ 1.79
UPK3B-205ENST00000490360 USP50Q70EL3 339 aaPredicted RBP26.21■■□□□ 1.79
UPK3B-205ENST00000490360 PNISRQ8TF01 805 aaKnown RBP26.2■■□□□ 1.78
UPK3B-205ENST00000490360 NUP98P52948 1817 aa26.2■■□□□ 1.78
UPK3B-205ENST00000490360 KIF6Q6ZMV9 814 aa26.19■■□□□ 1.78
UPK3B-205ENST00000490360 LARGE2Q8N3Y3 721 aa26.19■■□□□ 1.78
UPK3B-205ENST00000490360 MAP3K15Q6ZN16 1313 aa26.18■■□□□ 1.78
UPK3B-205ENST00000490360 THSD7BQ9C0I4 1608 aa26.18■■□□□ 1.78
UPK3B-205ENST00000490360 RBM17Q96I25 401 aaKnown RBP26.18■■□□□ 1.78
UPK3B-205ENST00000490360 CAPNS2Q96L46 248 aa26.18■■□□□ 1.78
UPK3B-205ENST00000490360 TRPM7Q96QT4 1865 aa26.18■■□□□ 1.78
UPK3B-205ENST00000490360 CRAMP1Q96RY5 1269 aa26.18■■□□□ 1.78
UPK3B-205ENST00000490360 TMX4Q9H1E5 349 aaPredicted RBP26.18■■□□□ 1.78
UPK3B-205ENST00000490360 VPS33BQ9H267 617 aa26.18■■□□□ 1.78
UPK3B-205ENST00000490360 SCNN1DP51172 638 aa26.17■■□□□ 1.78
UPK3B-205ENST00000490360 DCTN1Q14203 1278 aa26.17■■□□□ 1.78
UPK3B-205ENST00000490360 NUTM1Q86Y26 1132 aa26.17■■□□□ 1.78
UPK3B-205ENST00000490360 ABCC12Q96J65 1359 aa26.17■■□□□ 1.78
UPK3B-205ENST00000490360 NEFMP07197 916 aa26.16■■□□□ 1.78
UPK3B-205ENST00000490360 GPR101Q96P66 508 aaPredicted RBP26.16■■□□□ 1.78
UPK3B-205ENST00000490360 EPS15P42566 896 aa26.15■■□□□ 1.78
UPK3B-205ENST00000490360 NIM1KQ8IY84 436 aa26.15■■□□□ 1.78
UPK3B-205ENST00000490360 LTBP1Q14766 1721 aa26.14■■□□□ 1.78
UPK3B-205ENST00000490360 MAP2K2P36507 400 aa26.14■■□□□ 1.78
UPK3B-205ENST00000490360 PAXIP1Q6ZW49 1069 aaPredicted RBP26.14■■□□□ 1.78
UPK3B-205ENST00000490360 COL4A5P29400 1685 aa26.13■■□□□ 1.77
UPK3B-205ENST00000490360 PPEF1O14829 653 aaPredicted RBP26.13■■□□□ 1.77
UPK3B-205ENST00000490360 NGEFQ8N5V2 710 aa26.13■■□□□ 1.77
UPK3B-205ENST00000490360 CA12O43570 354 aa26.12■■□□□ 1.77
UPK3B-205ENST00000490360 PPP2R1AP30153 589 aa26.12■■□□□ 1.77
UPK3B-205ENST00000490360 ADARB2Q9NS39 739 aaKnown RBP26.12■■□□□ 1.77
UPK3B-205ENST00000490360 TLL2Q9Y6L7 1015 aa26.12■■□□□ 1.77
UPK3B-205ENST00000490360 SLC34A2O95436 690 aa26.11■■□□□ 1.77
UPK3B-205ENST00000490360 CST9Q5W186 159 aa26.11■■□□□ 1.77
UPK3B-205ENST00000490360 PPP1R42Q7Z4L9 355 aa26.11■■□□□ 1.77
UPK3B-205ENST00000490360 MIS18AQ9NYP9 233 aa26.11■■□□□ 1.77
UPK3B-205ENST00000490360 RRP7AQ9Y3A4 280 aaKnown RBP26.11■■□□□ 1.77
UPK3B-205ENST00000490360 FAM161AQ3B820 660 aa26.1■■□□□ 1.77
UPK3B-205ENST00000490360 ZNF34Q8IZ26 560 aa26.1■■□□□ 1.77
UPK3B-205ENST00000490360 SUPT20HQ8NEM7 779 aa26.1■■□□□ 1.77
UPK3B-205ENST00000490360 GPRC5DQ9NZD1 345 aa26.1■■□□□ 1.77
UPK3B-205ENST00000490360 ERBB4Q15303 1308 aa26.1■■□□□ 1.77
UPK3B-205ENST00000490360 KDM3BQ7LBC6 1761 aa26.1■■□□□ 1.77
UPK3B-205ENST00000490360 PPIP5K2O43314 1243 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 GPTP24298 496 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 PARP10Q53GL7 1025 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 SUSD4Q5VX71 490 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 CYP4F22Q6NT55 531 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 TTLL7Q6ZT98 887 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 HHIPL1Q96JK4 782 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 NLRP3Q96P20 1036 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 UBN2Q6ZU65 1347 aa26.09■■□□□ 1.77
UPK3B-205ENST00000490360 EIF4A1P60842 406 aaKnown RBP26.08■■□□□ 1.77
UPK3B-205ENST00000490360 GIGYF2Q6Y7W6 1299 aaKnown RBP26.08■■□□□ 1.77
UPK3B-205ENST00000490360 ATP6V0A2Q9Y487 856 aa26.08■■□□□ 1.77
UPK3B-205ENST00000490360 NTSR2O95665 410 aa26.07■■□□□ 1.76
UPK3B-205ENST00000490360 RGS19P49795 217 aa26.07■■□□□ 1.76
UPK3B-205ENST00000490360 MLLT1Q03111 559 aaPredicted RBP26.07■■□□□ 1.76
UPK3B-205ENST00000490360 ZBTB3Q9H5J0 574 aa26.07■■□□□ 1.76
UPK3B-205ENST00000490360 ZNRF3Q9ULT6 936 aa26.07■■□□□ 1.76
UPK3B-205ENST00000490360 CDHR2Q9BYE9 1310 aa26.07■■□□□ 1.76
UPK3B-205ENST00000490360 TRAF5O00463 557 aa26.06■■□□□ 1.76
UPK3B-205ENST00000490360 MYL6BP14649 208 aa26.06■■□□□ 1.76
UPK3B-205ENST00000490360 GRM1Q13255 1194 aa26.06■■□□□ 1.76
UPK3B-205ENST00000490360 CCDC85CA6NKD9 419 aa26.05■■□□□ 1.76
UPK3B-205ENST00000490360 FMR1Q06787 632 aaKnown RBP eCLIP26.05■■□□□ 1.76
UPK3B-205ENST00000490360 SAPCD2Q86UD0 394 aa26.05■■□□□ 1.76
UPK3B-205ENST00000490360 ZC3H15Q8WU90 426 aaKnown RBP26.05■■□□□ 1.76
UPK3B-205ENST00000490360 RTFDC1Q9BY42 306 aaPredicted RBP26.05■■□□□ 1.76
UPK3B-205ENST00000490360 DLG5Q8TDM6 1919 aa26.05■■□□□ 1.76
UPK3B-205ENST00000490360 AOC3Q16853 763 aa26.04■■□□□ 1.76
UPK3B-205ENST00000490360 SLC10A5Q5PT55 438 aa26.04■■□□□ 1.76
UPK3B-205ENST00000490360 PGAP2Q9UHJ9 254 aa26.04■■□□□ 1.76
UPK3B-205ENST00000490360 TCERG1O14776 1098 aaKnown RBP26.03■■□□□ 1.76
UPK3B-205ENST00000490360 BBOX1O75936 387 aa26.03■■□□□ 1.76
UPK3B-205ENST00000490360 CXCL9Q07325 125 aa26.03■■□□□ 1.76
UPK3B-205ENST00000490360 CELF2O95319 508 aaKnown RBP26.02■■□□□ 1.76
UPK3B-205ENST00000490360 BRPF1P55201 1214 aaPredicted RBP26.02■■□□□ 1.76
UPK3B-205ENST00000490360 UTP14AQ9BVJ6 771 aaKnown RBP26.02■■□□□ 1.76
UPK3B-205ENST00000490360 PNNQ9H307 717 aaKnown RBP26.02■■□□□ 1.76
UPK3B-205ENST00000490360 TNIP1Q15025 636 aa26.01■■□□□ 1.75
UPK3B-205ENST00000490360 CIAPIN1Q6FI81 312 aa26■■□□□ 1.75
UPK3B-205ENST00000490360 DPP8Q6V1X1 898 aaPredicted RBP26■■□□□ 1.75
UPK3B-205ENST00000490360 SP8Q8IXZ3 490 aa26■■□□□ 1.75
UPK3B-205ENST00000490360 AOC2O75106 756 aa25.99■■□□□ 1.75
UPK3B-205ENST00000490360 GMPSP49915 693 aaPredicted RBP25.99■■□□□ 1.75
UPK3B-205ENST00000490360 NFE2L2Q16236 605 aa25.99■■□□□ 1.75
UPK3B-205ENST00000490360 C3orf67Q6ZVT6 689 aa25.99■■□□□ 1.75
UPK3B-205ENST00000490360 ABCC4O15439 1325 aa25.98■■□□□ 1.75
UPK3B-205ENST00000490360 KIAA2012Q0VF49 1180 aa25.98■■□□□ 1.75
UPK3B-205ENST00000490360 CDC37L1Q7L3B6 337 aa25.98■■□□□ 1.75
UPK3B-205ENST00000490360 MPNDQ8N594 471 aa25.98■■□□□ 1.75
UPK3B-205ENST00000490360 BCL2L13Q9BXK5 485 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms