RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 DYRK3O43781 588 aa7.56□□□□□ -1.2
RBM39-235ENST00000490354 HIRAP54198 1017 aaPredicted RBP7.56□□□□□ -1.2
RBM39-235ENST00000490354 KCNQ4P56696 695 aa7.56□□□□□ -1.2
RBM39-235ENST00000490354 TYRO3Q06418 890 aa7.56□□□□□ -1.2
RBM39-235ENST00000490354 PLEKHM2Q8IWE5 1019 aa7.56□□□□□ -1.2
RBM39-235ENST00000490354 SUSD3Q96L08 255 aa7.56□□□□□ -1.2
RBM39-235ENST00000490354 NACC1Q96RE7 527 aa7.56□□□□□ -1.2
RBM39-235ENST00000490354 ANKIB1Q9P2G1 1089 aa7.56□□□□□ -1.2
RBM39-235ENST00000490354 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
RBM39-235ENST00000490354 OGFOD1Q8N543 542 aa7.55□□□□□ -1.2
RBM39-235ENST00000490354 BHMTQ93088 406 aa7.55□□□□□ -1.2
RBM39-235ENST00000490354 UCN2Q96RP3 112 aa7.55□□□□□ -1.2
RBM39-235ENST00000490354 TSEN2Q8NCE0 465 aaKnown RBP7.54□□□□□ -1.2
RBM39-235ENST00000490354 CADPSQ9ULU8 1353 aa7.54□□□□□ -1.2
RBM39-235ENST00000490354 SCO2A0A1W2PP80 73 aa7.53□□□□□ -1.2
RBM39-235ENST00000490354 M0R2N6 131 aa7.53□□□□□ -1.2
RBM39-235ENST00000490354 RAD21O60216 631 aa7.53□□□□□ -1.2
RBM39-235ENST00000490354 TBC1D8BQ0IIM8 1120 aa7.53□□□□□ -1.2
RBM39-235ENST00000490354 TRAPPC3LQ5T215 181 aa7.53□□□□□ -1.2
RBM39-235ENST00000490354 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
RBM39-235ENST00000490354 MKRN1Q9UHC7 482 aaKnown RBP7.53□□□□□ -1.2
RBM39-235ENST00000490354 CFTRP13569 1480 aa7.52□□□□□ -1.21
RBM39-235ENST00000490354 C21orf2O43822 256 aa7.52□□□□□ -1.21
RBM39-235ENST00000490354 ATP9BO43861 1147 aa7.52□□□□□ -1.21
RBM39-235ENST00000490354 PPP1R12BO60237 982 aaPredicted RBP7.52□□□□□ -1.21
RBM39-235ENST00000490354 LILRB5O75023 590 aa7.52□□□□□ -1.21
RBM39-235ENST00000490354 HDGFL1Q5TGJ6 251 aa7.52□□□□□ -1.21
RBM39-235ENST00000490354 ALDH16A1Q8IZ83 802 aa7.52□□□□□ -1.21
RBM39-235ENST00000490354 SIX5Q8N196 739 aa7.52□□□□□ -1.21
RBM39-235ENST00000490354 ZNF594Q96JF6 807 aaPredicted RBP7.52□□□□□ -1.21
RBM39-235ENST00000490354 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.21
RBM39-235ENST00000490354 PALM3A6NDB9 673 aaPredicted RBP7.51□□□□□ -1.21
RBM39-235ENST00000490354 DKK1O94907 266 aa7.51□□□□□ -1.21
RBM39-235ENST00000490354 PRSS36Q5K4E3 855 aa7.51□□□□□ -1.21
RBM39-235ENST00000490354 IGFLR1Q9H665 355 aa7.51□□□□□ -1.21
RBM39-235ENST00000490354 ATAD2Q6PL18 1390 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 A0A0A0MRY4 1105 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 C9orf172C9J069 976 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 SELPP16109 830 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 ADGRE1Q14246 886 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 MBTPS1Q14703 1052 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 BTLAQ7Z6A9 289 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 NUDT8Q8WV74 236 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 JPH1Q9HDC5 661 aaPredicted RBP7.5□□□□□ -1.21
RBM39-235ENST00000490354 SLC6A14Q9UN76 642 aa7.5□□□□□ -1.21
RBM39-235ENST00000490354 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.49□□□□□ -1.21
RBM39-235ENST00000490354 UBTFP17480 764 aaKnown RBP7.49□□□□□ -1.21
RBM39-235ENST00000490354 NGLY1Q96IV0 654 aa7.49□□□□□ -1.21
RBM39-235ENST00000490354 C2orf49Q9BVC5 232 aaPredicted RBP7.49□□□□□ -1.21
RBM39-235ENST00000490354 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
RBM39-235ENST00000490354 ELNP15502 786 aa7.48□□□□□ -1.21
RBM39-235ENST00000490354 SHISA2Q6UWI4 295 aa7.48□□□□□ -1.21
RBM39-235ENST00000490354 STAG2Q8N3U4 1231 aa7.48□□□□□ -1.21
RBM39-235ENST00000490354 CHMP7Q8WUX9 453 aaPredicted RBP7.48□□□□□ -1.21
RBM39-235ENST00000490354 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
RBM39-235ENST00000490354 RBM19Q9Y4C8 960 aaKnown RBP7.48□□□□□ -1.21
RBM39-235ENST00000490354 ARTNQ5T4W7 220 aa7.47□□□□□ -1.21
RBM39-235ENST00000490354 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
RBM39-235ENST00000490354 GSX2Q9BZM3 304 aa7.47□□□□□ -1.21
RBM39-235ENST00000490354 ZFP64Q9NPA5 681 aa7.47□□□□□ -1.21
RBM39-235ENST00000490354 DNAJB12Q9NXW2 375 aaKnown RBP7.47□□□□□ -1.21
RBM39-235ENST00000490354 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
RBM39-235ENST00000490354 H2AFB1P0C5Y9 115 aa7.46□□□□□ -1.22
RBM39-235ENST00000490354 H2AFB2P0C5Z0 115 aa7.46□□□□□ -1.22
RBM39-235ENST00000490354 AFF1P51825 1210 aaKnown RBP7.46□□□□□ -1.22
RBM39-235ENST00000490354 RAC1P63000 192 aa7.46□□□□□ -1.22
RBM39-235ENST00000490354 HIF1AQ16665 826 aa7.46□□□□□ -1.22
RBM39-235ENST00000490354 TXNRD3Q86VQ6 643 aa7.46□□□□□ -1.22
RBM39-235ENST00000490354 LENG1Q96BZ8 264 aaPredicted RBP7.46□□□□□ -1.22
RBM39-235ENST00000490354 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
RBM39-235ENST00000490354 NFKB1P19838 968 aa7.45□□□□□ -1.22
RBM39-235ENST00000490354 RASA1P20936 1047 aa7.45□□□□□ -1.22
RBM39-235ENST00000490354 DMRTC2Q8IXT2 367 aaPredicted RBP7.45□□□□□ -1.22
RBM39-235ENST00000490354 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
RBM39-235ENST00000490354 PNMA5Q96PV4 448 aa7.45□□□□□ -1.22
RBM39-235ENST00000490354 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
RBM39-235ENST00000490354 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.45□□□□□ -1.22
RBM39-235ENST00000490354 SEC13P55735 322 aa7.44□□□□□ -1.22
RBM39-235ENST00000490354 NRG1Q02297 640 aaPredicted RBP7.44□□□□□ -1.22
RBM39-235ENST00000490354 FLIIQ13045 1269 aa7.44□□□□□ -1.22
RBM39-235ENST00000490354 CCINQ13939 588 aa7.44□□□□□ -1.22
RBM39-235ENST00000490354 IER5Q5VY09 327 aa7.44□□□□□ -1.22
RBM39-235ENST00000490354 ILDR2Q71H61 639 aa7.44□□□□□ -1.22
RBM39-235ENST00000490354 FMR1NBQ8N0W7 255 aaPredicted RBP7.44□□□□□ -1.22
RBM39-235ENST00000490354 BCS1LQ9Y276 419 aa7.44□□□□□ -1.22
RBM39-235ENST00000490354 TGFBR3LH3BV60 316 aa7.43□□□□□ -1.22
RBM39-235ENST00000490354 LGR5O75473 907 aa7.43□□□□□ -1.22
RBM39-235ENST00000490354 RGS9O75916 674 aaPredicted RBP7.43□□□□□ -1.22
RBM39-235ENST00000490354 RTN1Q16799 776 aa7.43□□□□□ -1.22
RBM39-235ENST00000490354 TP53INP1Q96A56 240 aa7.43□□□□□ -1.22
RBM39-235ENST00000490354 DMGDHQ9UI17 866 aaKnown RBP7.43□□□□□ -1.22
RBM39-235ENST00000490354 USP21Q9UK80 565 aa7.43□□□□□ -1.22
RBM39-235ENST00000490354 WRNQ14191 1432 aaPredicted RBP eCLIP7.43□□□□□ -1.22
RBM39-235ENST00000490354 PDS5BQ9NTI5 1447 aa7.43□□□□□ -1.22
RBM39-235ENST00000490354 GRNP28799 593 aaKnown RBP7.42□□□□□ -1.22
RBM39-235ENST00000490354 HINFPQ9BQA5 517 aa7.42□□□□□ -1.22
RBM39-235ENST00000490354 SSBP4Q9BWG4 385 aaPredicted RBP7.42□□□□□ -1.22
RBM39-235ENST00000490354 TFIP11Q9UBB9 837 aaKnown RBP7.42□□□□□ -1.22
RBM39-235ENST00000490354 CPB1P15086 417 aa7.41□□□□□ -1.22
RBM39-235ENST00000490354 MSL1Q68DK7 614 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms