RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 MYD88Q99836 296 aa22.21■■□□□ 1.15
ERCC3-207ENST00000490062 ATP5J2-PTCD1G3V325 749 aa22.2■■□□□ 1.14
ERCC3-207ENST00000490062 NEURL1BA8MQ27 555 aa22.19■■□□□ 1.14
ERCC3-207ENST00000490062 BEND3Q5T5X7 828 aa22.19■■□□□ 1.14
ERCC3-207ENST00000490062 N4BP2Q86UW6 1770 aaPredicted RBP22.19■■□□□ 1.14
ERCC3-207ENST00000490062 DLEC1Q9Y238 1755 aa22.18■■□□□ 1.14
ERCC3-207ENST00000490062 ABCC12Q96J65 1359 aa22.18■■□□□ 1.14
ERCC3-207ENST00000490062 SH3TC1Q8TE82 1336 aa22.18■■□□□ 1.14
ERCC3-207ENST00000490062 PDE6BP35913 854 aa22.18■■□□□ 1.14
ERCC3-207ENST00000490062 ZBTB38Q8NAP3 1195 aaPredicted RBP22.18■■□□□ 1.14
ERCC3-207ENST00000490062 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
ERCC3-207ENST00000490062 API5Q9BZZ5 524 aaKnown RBP22.18■■□□□ 1.14
ERCC3-207ENST00000490062 CWC25Q9NXE8 425 aaPredicted RBP22.18■■□□□ 1.14
ERCC3-207ENST00000490062 F6X3S4 739 aa22.17■■□□□ 1.14
ERCC3-207ENST00000490062 ALDH1L1O75891 902 aa22.17■■□□□ 1.14
ERCC3-207ENST00000490062 PCCAP05165 728 aaPredicted RBP22.17■■□□□ 1.14
ERCC3-207ENST00000490062 NOB1Q9ULX3 412 aaKnown RBP22.17■■□□□ 1.14
ERCC3-207ENST00000490062 BRCA1P38398 1863 aaKnown RBP22.16■■□□□ 1.14
ERCC3-207ENST00000490062 IPO8O15397 1037 aaKnown RBP22.16■■□□□ 1.14
ERCC3-207ENST00000490062 BCAR3O75815 825 aa22.16■■□□□ 1.14
ERCC3-207ENST00000490062 CRY2Q49AN0 593 aa22.16■■□□□ 1.14
ERCC3-207ENST00000490062 NLGN2Q8NFZ4 835 aa22.16■■□□□ 1.14
ERCC3-207ENST00000490062 TRMT112Q9UI30 125 aaKnown RBP22.16■■□□□ 1.14
ERCC3-207ENST00000490062 LAMB2P55268 1798 aa22.15■■□□□ 1.14
ERCC3-207ENST00000490062 CDHR2Q9BYE9 1310 aa22.15■■□□□ 1.14
ERCC3-207ENST00000490062 GCKRQ14397 625 aa22.15■■□□□ 1.14
ERCC3-207ENST00000490062 ERFEQ4G0M1 354 aa22.15■■□□□ 1.14
ERCC3-207ENST00000490062 NUTM1Q86Y26 1132 aa22.15■■□□□ 1.14
ERCC3-207ENST00000490062 NPHP1O15259 732 aa22.14■■□□□ 1.13
ERCC3-207ENST00000490062 KCNA3P22001 575 aa22.14■■□□□ 1.13
ERCC3-207ENST00000490062 GTF2E1P29083 439 aaPredicted RBP22.14■■□□□ 1.13
ERCC3-207ENST00000490062 CWF19L2Q2TBE0 894 aaKnown RBP22.14■■□□□ 1.13
ERCC3-207ENST00000490062 TNRC6CQ9HCJ0 1690 aaKnown RBP22.14■■□□□ 1.13
ERCC3-207ENST00000490062 ABCC4O15439 1325 aa22.13■■□□□ 1.13
ERCC3-207ENST00000490062 FAM177BA6PVY3 158 aa22.13■■□□□ 1.13
ERCC3-207ENST00000490062 H7C1W4 665 aa22.13■■□□□ 1.13
ERCC3-207ENST00000490062 HSP90B1P14625 803 aaKnown RBP22.13■■□□□ 1.13
ERCC3-207ENST00000490062 ATF7IPQ6VMQ6 1270 aa22.13■■□□□ 1.13
ERCC3-207ENST00000490062 SRCIN1Q9C0H9 1055 aa22.13■■□□□ 1.13
ERCC3-207ENST00000490062 RCAN3Q9UKA8 241 aa22.13■■□□□ 1.13
ERCC3-207ENST00000490062 COL11A2P13942 1736 aaPredicted RBP22.13■■□□□ 1.13
ERCC3-207ENST00000490062 DDX60Q8IY21 1712 aaKnown RBP22.13■■□□□ 1.13
ERCC3-207ENST00000490062 SRGNP10124 158 aa22.12■■□□□ 1.13
ERCC3-207ENST00000490062 DPEP1P16444 411 aa22.12■■□□□ 1.13
ERCC3-207ENST00000490062 UTYO14607 1347 aa22.11■■□□□ 1.13
ERCC3-207ENST00000490062 TRIM27P14373 513 aa22.11■■□□□ 1.13
ERCC3-207ENST00000490062 CASP7P55210 303 aa22.11■■□□□ 1.13
ERCC3-207ENST00000490062 ZKSCAN2Q63HK3 967 aa22.11■■□□□ 1.13
ERCC3-207ENST00000490062 KLHL34Q8N239 644 aa22.11■■□□□ 1.13
ERCC3-207ENST00000490062 CCDC24Q8N4L8 307 aa22.11■■□□□ 1.13
ERCC3-207ENST00000490062 FAM89AQ96GI7 184 aa22.11■■□□□ 1.13
ERCC3-207ENST00000490062 H0YIN7 160 aa22.1■■□□□ 1.13
ERCC3-207ENST00000490062 HOXA10P31260 410 aaPredicted RBP22.1■■□□□ 1.13
ERCC3-207ENST00000490062 CCT4P50991 539 aaKnown RBP22.1■■□□□ 1.13
ERCC3-207ENST00000490062 STYK1Q6J9G0 422 aa22.1■■□□□ 1.13
ERCC3-207ENST00000490062 C2CD5Q86YS7 1000 aa22.1■■□□□ 1.13
ERCC3-207ENST00000490062 NLRP3Q96P20 1036 aa22.1■■□□□ 1.13
ERCC3-207ENST00000490062 PLA2G12BQ9BX93 195 aa22.1■■□□□ 1.13
ERCC3-207ENST00000490062 A0A0G2JLW4 131 aa22.09■■□□□ 1.13
ERCC3-207ENST00000490062 IRS4O14654 1257 aaPredicted RBP22.09■■□□□ 1.13
ERCC3-207ENST00000490062 SF3B3Q15393 1217 aaKnown RBP22.09■■□□□ 1.13
ERCC3-207ENST00000490062 INTS3Q68E01 1043 aaKnown RBP22.09■■□□□ 1.13
ERCC3-207ENST00000490062 SLC4A10Q6U841 1118 aa22.09■■□□□ 1.13
ERCC3-207ENST00000490062 SYNE4Q8N205 404 aa22.09■■□□□ 1.13
ERCC3-207ENST00000490062 MASTLQ96GX5 879 aa22.09■■□□□ 1.13
ERCC3-207ENST00000490062 NPR1P16066 1061 aa22.08■■□□□ 1.13
ERCC3-207ENST00000490062 CHRNA5P30532 468 aa22.08■■□□□ 1.13
ERCC3-207ENST00000490062 PIM2Q9P1W9 311 aa22.08■■□□□ 1.13
ERCC3-207ENST00000490062 GRM8O00222 908 aa22.07■■□□□ 1.12
ERCC3-207ENST00000490062 ARFGEF1Q9Y6D6 1849 aa22.06■■□□□ 1.12
ERCC3-207ENST00000490062 PDE8AO60658 829 aa22.06■■□□□ 1.12
ERCC3-207ENST00000490062 HCLS1P14317 486 aaPredicted RBP22.06■■□□□ 1.12
ERCC3-207ENST00000490062 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
ERCC3-207ENST00000490062 FRAT1Q92837 279 aaPredicted RBP22.06■■□□□ 1.12
ERCC3-207ENST00000490062 CNKSR1Q969H4 720 aa22.06■■□□□ 1.12
ERCC3-207ENST00000490062 UBE3BQ7Z3V4 1068 aa22.05■■□□□ 1.12
ERCC3-207ENST00000490062 CRAMP1Q96RY5 1269 aa22.05■■□□□ 1.12
ERCC3-207ENST00000490062 MYH3P11055 1940 aa22.05■■□□□ 1.12
ERCC3-207ENST00000490062 RTL9Q8NET4 1388 aa22.04■■□□□ 1.12
ERCC3-207ENST00000490062 TTLL6Q8N841 843 aa22.04■■□□□ 1.12
ERCC3-207ENST00000490062 USP44Q9H0E7 712 aa22.04■■□□□ 1.12
ERCC3-207ENST00000490062 MS4A1P11836 297 aa22.03■■□□□ 1.12
ERCC3-207ENST00000490062 ALDH1B1P30837 517 aa22.03■■□□□ 1.12
ERCC3-207ENST00000490062 DALRD3Q5D0E6 543 aaKnown RBP22.02■■□□□ 1.12
ERCC3-207ENST00000490062 C9orf78Q9NZ63 289 aaPredicted RBP22.02■■□□□ 1.12
ERCC3-207ENST00000490062 CSF1RP07333 972 aa22.01■■□□□ 1.11
ERCC3-207ENST00000490062 CTSWP56202 376 aa22.01■■□□□ 1.11
ERCC3-207ENST00000490062 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
ERCC3-207ENST00000490062 DZIP1LQ8IYY4 767 aaKnown RBP22.01■■□□□ 1.11
ERCC3-207ENST00000490062 RPGRQ92834 1020 aaKnown RBP22.01■■□□□ 1.11
ERCC3-207ENST00000490062 RBM17Q96I25 401 aaKnown RBP22.01■■□□□ 1.11
ERCC3-207ENST00000490062 NBPF7P0C2Y1 421 aaPredicted RBP22■■□□□ 1.11
ERCC3-207ENST00000490062 TTLL11Q8NHH1 800 aa22■■□□□ 1.11
ERCC3-207ENST00000490062 C7orf43Q8WVR3 580 aa22■■□□□ 1.11
ERCC3-207ENST00000490062 ZNF622Q969S3 477 aaKnown RBP eCLIP22■■□□□ 1.112e-8■■□□□ 13.7
ERCC3-207ENST00000490062 TNNQ9UQP3 1299 aa22■■□□□ 1.11
ERCC3-207ENST00000490062 SLX4Q8IY92 1834 aa21.99■■□□□ 1.11
ERCC3-207ENST00000490062 YBX3P16989 372 aaKnown RBP eCLIP21.99■■□□□ 1.11
ERCC3-207ENST00000490062 CCDC152Q4G0S7 254 aa21.99■■□□□ 1.11
ERCC3-207ENST00000490062 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms