RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 MRPL12P52815 198 aaKnown RBP10.16□□□□□ -0.78
LSAMP-205ENST00000490035 PIP4K2BP78356 416 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 NSRP1Q9H0G5 558 aaKnown RBP10.16□□□□□ -0.78
LSAMP-205ENST00000490035 ARHGEF12Q9NZN5 1544 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 CCDC155Q8N6L0 562 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 EXOC6BQ9Y2D4 811 aa10.16□□□□□ -0.78
LSAMP-205ENST00000490035 TNNT1P13805 278 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 UBA7P41226 1012 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 RPGRQ92834 1020 aaKnown RBP10.15□□□□□ -0.78
LSAMP-205ENST00000490035 DENND4BO75064 1496 aaPredicted RBP10.15□□□□□ -0.78
LSAMP-205ENST00000490035 FAM177BA6PVY3 158 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 TSNARE1Q96NA8 513 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 ANKIB1Q9P2G1 1089 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 ACTN2P35609 894 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 RASAL2Q9UJF2 1139 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 RBM25P49756 843 aaKnown RBP10.15□□□□□ -0.78
LSAMP-205ENST00000490035 MFSD6Q6ZSS7 791 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 LMBR1Q8WVP7 490 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 URI1O94763 535 aaPredicted RBP10.15□□□□□ -0.78
LSAMP-205ENST00000490035 IL1RAPL2Q9NP60 686 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 PLB1Q6P1J6 1458 aa10.15□□□□□ -0.78
LSAMP-205ENST00000490035 CALM1P0DP23 149 aa10.15□□□□□ -0.79
LSAMP-205ENST00000490035 CALM2P0DP24 149 aa10.15□□□□□ -0.79
LSAMP-205ENST00000490035 CALM3P0DP25 149 aa10.15□□□□□ -0.79
LSAMP-205ENST00000490035 SNW1Q13573 536 aaKnown RBP10.15□□□□□ -0.79
LSAMP-205ENST00000490035 RRS1Q15050 365 aaKnown RBP10.15□□□□□ -0.79
LSAMP-205ENST00000490035 PRPF40BQ6NWY9 871 aaKnown RBP10.15□□□□□ -0.79
LSAMP-205ENST00000490035 MTIF2P46199 727 aaKnown RBP10.15□□□□□ -0.79
LSAMP-205ENST00000490035 PIBF1Q8WXW3 757 aa10.15□□□□□ -0.79
LSAMP-205ENST00000490035 CTNNA2P26232 953 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 FAM193AP78312 1265 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 NEK1Q96PY6 1258 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 GOLGA8AA7E2F4 631 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 MINDY4BA8MYZ0 360 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 SPECC1Q5M775 1068 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 SNX21Q969T3 373 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 FANCAO15360 1455 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 MAP4K4O95819 1239 aaPredicted RBP10.14□□□□□ -0.79
LSAMP-205ENST00000490035 FERP16591 822 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 CALML3P27482 149 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 FLIIQ13045 1269 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 FSIP1Q8NA03 581 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 CERS3Q8IU89 383 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 SMARCC1Q92922 1105 aaPredicted RBP10.14□□□□□ -0.79
LSAMP-205ENST00000490035 KDM5BQ9UGL1 1544 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 HMGB1P1B2RPK0 211 aaPredicted RBP10.14□□□□□ -0.79
LSAMP-205ENST00000490035 GRIPAP1Q4V328 841 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 CTR9Q6PD62 1173 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 CEP112Q8N8E3 955 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 CRNKL1Q9BZJ0 848 aaKnown RBP10.14□□□□□ -0.79
LSAMP-205ENST00000490035 JAKMIP2Q96AA8 810 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 BOLA2Q9H3K6 86 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 USP25Q9UHP3 1055 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 TTC14Q96N46 770 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 IKBKGQ9Y6K9 419 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 KAT14Q9H8E8 782 aa10.14□□□□□ -0.79
LSAMP-205ENST00000490035 TUBB2AQ13885 445 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 TBC1D32Q96NH3 1257 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 TUBB2BQ9BVA1 445 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 STK24Q9Y6E0 443 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 ZNF165P49910 485 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 METAP2P50579 478 aaKnown RBP eCLIP10.13□□□□□ -0.79
LSAMP-205ENST00000490035 BRPF3Q9ULD4 1205 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 HSF2BPO75031 334 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 TTC41PQ6P2S7 1318 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 PLCD4Q9BRC7 762 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 UGGT2Q9NYU1 1516 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 TDRD12Q587J7 1177 aaKnown RBP10.13□□□□□ -0.79
LSAMP-205ENST00000490035 TMEM67Q5HYA8 995 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 CCDC174Q6PII3 467 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 ANKS4BQ8N8V4 417 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 EXOC1Q9NV70 894 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 CFAP74Q9C0B2 1584 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 KRT83P78385 493 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 TTC22Q5TAA0 569 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 LRSAM1Q6UWE0 723 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 TSGA10Q9BZW7 698 aa10.13□□□□□ -0.79
LSAMP-205ENST00000490035 BCL11BQ9C0K0 894 aaPredicted RBP10.13□□□□□ -0.79
LSAMP-205ENST00000490035 KDM5AP29375 1690 aaKnown RBP10.12□□□□□ -0.79
LSAMP-205ENST00000490035 MYD88Q99836 296 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 CABP5Q9NP86 173 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 NAP1L4Q99733 375 aaKnown RBP10.12□□□□□ -0.79
LSAMP-205ENST00000490035 BICDL2A1A5D9 508 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 ATP2A1O14983 1001 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 OPA1O60313 960 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 PHF23Q9BUL5 403 aaPredicted RBP10.12□□□□□ -0.79
LSAMP-205ENST00000490035 ARFGAP3Q9NP61 516 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 SNRPA1P09661 255 aaKnown RBP10.12□□□□□ -0.79
LSAMP-205ENST00000490035 RBM10P98175 930 aaKnown RBP10.12□□□□□ -0.79
LSAMP-205ENST00000490035 NUCB1Q02818 461 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 KIAA0753Q2KHM9 967 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 CCDC152Q4G0S7 254 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.12□□□□□ -0.79
LSAMP-205ENST00000490035 FBXO3Q9UK99 471 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 MYO1BO43795 1136 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
LSAMP-205ENST00000490035 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
LSAMP-205ENST00000490035 ESR2Q92731 530 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms