RNA–Protein interactions for RNA: ENST00000489918.1

C1orf61-220, Transcript of chromosome 1 open reading frame 61, humanhuman

TSL 3

Gene C1orf61, Length 427 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-220ENST00000489918 UTP14AQ9BVJ6 771 aaKnown RBP25.38■■□□□ 1.65
C1orf61-220ENST00000489918 RIC1Q4ADV7 1423 aa25.37■■□□□ 1.65
C1orf61-220ENST00000489918 PRELPP51888 382 aa25.37■■□□□ 1.65
C1orf61-220ENST00000489918 TWISTNBQ3B726 338 aaPredicted RBP25.37■■□□□ 1.65
C1orf61-220ENST00000489918 CCDC30Q5VVM6 783 aa25.37■■□□□ 1.65
C1orf61-220ENST00000489918 C3orf67Q6ZVT6 689 aa25.37■■□□□ 1.65
C1orf61-220ENST00000489918 ZNF526Q8TF50 670 aaPredicted RBP25.37■■□□□ 1.65
C1orf61-220ENST00000489918 NFKBIEO00221 500 aa25.36■■□□□ 1.65
C1orf61-220ENST00000489918 CRY2Q49AN0 593 aa25.36■■□□□ 1.65
C1orf61-220ENST00000489918 SYNE4Q8N205 404 aa25.36■■□□□ 1.65
C1orf61-220ENST00000489918 RNF181Q9P0P0 153 aa25.35■■□□□ 1.65
C1orf61-220ENST00000489918 FER1L6Q2WGJ9 1857 aa25.34■■□□□ 1.65
C1orf61-220ENST00000489918 ATP5J2-PTCD1G3V325 749 aa25.34■■□□□ 1.65
C1orf61-220ENST00000489918 ISCA1Q9BUE6 129 aa25.34■■□□□ 1.65
C1orf61-220ENST00000489918 ZNF521Q96K83 1311 aa25.34■■□□□ 1.65
C1orf61-220ENST00000489918 CCER2I3L3R5 266 aa25.33■■□□□ 1.65
C1orf61-220ENST00000489918 EXOSC9Q06265 439 aaKnown RBP25.33■■□□□ 1.65
C1orf61-220ENST00000489918 GOLGA2Q08379 1002 aa25.33■■□□□ 1.65
C1orf61-220ENST00000489918 C7orf43Q8WVR3 580 aa25.33■■□□□ 1.65
C1orf61-220ENST00000489918 CCDC88AQ3V6T2 1871 aa25.32■■□□□ 1.64
C1orf61-220ENST00000489918 SLC10A5Q5PT55 438 aa25.32■■□□□ 1.64
C1orf61-220ENST00000489918 OLFM4Q6UX06 510 aa25.32■■□□□ 1.64
C1orf61-220ENST00000489918 RIC3Q7Z5B4 369 aa25.32■■□□□ 1.64
C1orf61-220ENST00000489918 TRMT112Q9UI30 125 aaKnown RBP25.32■■□□□ 1.64
C1orf61-220ENST00000489918 CHMP4AQ9BY43 222 aa25.31■■□□□ 1.64
C1orf61-220ENST00000489918 GPBP1L1Q9HC44 474 aaPredicted RBP25.31■■□□□ 1.64
C1orf61-220ENST00000489918 RNF123Q5XPI4 1314 aa25.31■■□□□ 1.64
C1orf61-220ENST00000489918 HCLS1P14317 486 aaPredicted RBP25.3■■□□□ 1.64
C1orf61-220ENST00000489918 LMNB1P20700 586 aa25.3■■□□□ 1.64
C1orf61-220ENST00000489918 RPGRQ92834 1020 aaKnown RBP25.3■■□□□ 1.64
C1orf61-220ENST00000489918 STK31Q9BXU1 1019 aa25.3■■□□□ 1.64
C1orf61-220ENST00000489918 LAMB2P55268 1798 aa25.3■■□□□ 1.64
C1orf61-220ENST00000489918 VAMP4O75379 141 aa25.29■■□□□ 1.64
C1orf61-220ENST00000489918 ALDH1B1P30837 517 aa25.29■■□□□ 1.64
C1orf61-220ENST00000489918 HOXA10P31260 410 aaPredicted RBP25.29■■□□□ 1.64
C1orf61-220ENST00000489918 G2E3Q7L622 706 aa25.29■■□□□ 1.64
C1orf61-220ENST00000489918 SH3TC1Q8TE82 1336 aa25.29■■□□□ 1.64
C1orf61-220ENST00000489918 SLC51AQ86UW1 340 aa25.28■■□□□ 1.64
C1orf61-220ENST00000489918 NLRP3Q96P20 1036 aa25.28■■□□□ 1.64
C1orf61-220ENST00000489918 MYD88Q99836 296 aa25.28■■□□□ 1.64
C1orf61-220ENST00000489918 MYH16Q9H6N6 1097 aa25.28■■□□□ 1.64
C1orf61-220ENST00000489918 DDX60Q8IY21 1712 aaKnown RBP25.27■■□□□ 1.64
C1orf61-220ENST00000489918 FAM89AQ96GI7 184 aa25.27■■□□□ 1.64
C1orf61-220ENST00000489918 TAOK3Q9H2K8 898 aa25.27■■□□□ 1.64
C1orf61-220ENST00000489918 TIAM2Q8IVF5 1701 aa25.26■■□□□ 1.63
C1orf61-220ENST00000489918 SLC4A2P04920 1241 aa25.26■■□□□ 1.63
C1orf61-220ENST00000489918 TRIM28Q13263 835 aaKnown RBP25.26■■□□□ 1.63
C1orf61-220ENST00000489918 CCDC93Q567U6 631 aa25.26■■□□□ 1.63
C1orf61-220ENST00000489918 SOGA3Q5TF21 947 aa25.26■■□□□ 1.63
C1orf61-220ENST00000489918 DIEXFQ68CQ4 756 aaKnown RBP25.26■■□□□ 1.63
C1orf61-220ENST00000489918 MAP3K2Q9Y2U5 619 aa25.26■■□□□ 1.63
C1orf61-220ENST00000489918 DDX58O95786 925 aaKnown RBP25.25■■□□□ 1.63
C1orf61-220ENST00000489918 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
C1orf61-220ENST00000489918 RBM17Q96I25 401 aaKnown RBP25.25■■□□□ 1.63
C1orf61-220ENST00000489918 CRAMP1Q96RY5 1269 aa25.25■■□□□ 1.63
C1orf61-220ENST00000489918 METTL22Q9BUU2 404 aaPredicted RBP25.25■■□□□ 1.63
C1orf61-220ENST00000489918 LTBP3Q9NS15 1303 aa25.25■■□□□ 1.63
C1orf61-220ENST00000489918 PI4KAP2A4QPH2 592 aa25.24■■□□□ 1.63
C1orf61-220ENST00000489918 KSR2Q6VAB6 950 aa25.24■■□□□ 1.63
C1orf61-220ENST00000489918 PI4KAP1Q8N8J0 262 aa25.24■■□□□ 1.63
C1orf61-220ENST00000489918 DICER1Q9UPY3 1922 aaKnown RBP25.23■■□□□ 1.63
C1orf61-220ENST00000489918 SNED1Q8TER0 1413 aa25.22■■□□□ 1.63
C1orf61-220ENST00000489918 ABCC4O15439 1325 aa25.22■■□□□ 1.63
C1orf61-220ENST00000489918 MIER1Q8N108 512 aa25.22■■□□□ 1.63
C1orf61-220ENST00000489918 FLIIQ13045 1269 aa25.21■■□□□ 1.63
C1orf61-220ENST00000489918 NMRK2Q9NPI5 230 aa25.21■■□□□ 1.63
C1orf61-220ENST00000489918 CACNA1FO60840 1977 aa25.21■■□□□ 1.63
C1orf61-220ENST00000489918 TAF1P21675 1872 aa25.21■■□□□ 1.63
C1orf61-220ENST00000489918 KIF3CO14782 793 aa25.2■■□□□ 1.62
C1orf61-220ENST00000489918 PPEF1O14829 653 aaPredicted RBP25.2■■□□□ 1.62
C1orf61-220ENST00000489918 FKBP4Q02790 459 aaKnown RBP eCLIP25.2■■□□□ 1.62
C1orf61-220ENST00000489918 JARID2Q92833 1246 aaPredicted RBP25.2■■□□□ 1.62
C1orf61-220ENST00000489918 ZC3H4Q9UPT8 1303 aaKnown RBP25.19■■□□□ 1.62
C1orf61-220ENST00000489918 IRS4O14654 1257 aaPredicted RBP25.19■■□□□ 1.62
C1orf61-220ENST00000489918 IGKV5-2P06315 115 aa25.19■■□□□ 1.62
C1orf61-220ENST00000489918 C1QTNF8P60827 252 aa25.19■■□□□ 1.62
C1orf61-220ENST00000489918 RTKN2Q8IZC4 609 aa25.19■■□□□ 1.62
C1orf61-220ENST00000489918 ZBTB38Q8NAP3 1195 aaPredicted RBP25.19■■□□□ 1.62
C1orf61-220ENST00000489918 CCDC191Q8NCU4 936 aa25.19■■□□□ 1.62
C1orf61-220ENST00000489918 ZNF277Q9NRM2 450 aaPredicted RBP25.19■■□□□ 1.62
C1orf61-220ENST00000489918 CWC25Q9NXE8 425 aaPredicted RBP25.18■■□□□ 1.62
C1orf61-220ENST00000489918 CWF19L2Q2TBE0 894 aaKnown RBP25.17■■□□□ 1.62
C1orf61-220ENST00000489918 CDCA7LQ96GN5 454 aa25.17■■□□□ 1.62
C1orf61-220ENST00000489918 COL4A1P02462 1669 aa25.17■■□□□ 1.62
C1orf61-220ENST00000489918 PCCAP05165 728 aaPredicted RBP25.16■■□□□ 1.62
C1orf61-220ENST00000489918 FKBP5Q13451 457 aaPredicted RBP25.16■■□□□ 1.62
C1orf61-220ENST00000489918 DDX46Q7L014 1031 aaKnown RBP25.16■■□□□ 1.62
C1orf61-220ENST00000489918 KDM2BQ8NHM5 1336 aa25.15■■□□□ 1.62
C1orf61-220ENST00000489918 E9PSI1 815 aa25.15■■□□□ 1.62
C1orf61-220ENST00000489918 SLFN5Q08AF3 891 aa25.15■■□□□ 1.62
C1orf61-220ENST00000489918 SF3B3Q15393 1217 aaKnown RBP25.15■■□□□ 1.62
C1orf61-220ENST00000489918 CC2D2BQ6DHV5 1058 aa25.15■■□□□ 1.62
C1orf61-220ENST00000489918 GLTPD2A6NH11 291 aa25.14■■□□□ 1.62
C1orf61-220ENST00000489918 NEXNQ0ZGT2 675 aa25.14■■□□□ 1.62
C1orf61-220ENST00000489918 GRAPQ13588 217 aa25.14■■□□□ 1.62
C1orf61-220ENST00000489918 GRAPLQ8TC17 118 aaPredicted RBP25.14■■□□□ 1.62
C1orf61-220ENST00000489918 PSMD1Q99460 953 aa25.14■■□□□ 1.62
C1orf61-220ENST00000489918 ATP6V0A2Q9Y487 856 aa25.14■■□□□ 1.62
C1orf61-220ENST00000489918 NEURL1BA8MQ27 555 aa25.13■■□□□ 1.61
C1orf61-220ENST00000489918 RRAGCQ9HB90 399 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms