RNA–Protein interactions for RNA: ENST00000489912.1

LSM10-203, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-203ENST00000489912 IBTKQ9P2D0 1353 aaPredicted RBP29.2■■■□□ 2.26
LSM10-203ENST00000489912 SLC4A2P04920 1241 aa29.19■■■□□ 2.26
LSM10-203ENST00000489912 CACNA1FO60840 1977 aa29.19■■■□□ 2.26
LSM10-203ENST00000489912 SRGNP10124 158 aa29.18■■■□□ 2.26
LSM10-203ENST00000489912 MASTLQ96GX5 879 aa29.18■■■□□ 2.26
LSM10-203ENST00000489912 DDX58O95786 925 aaKnown RBP29.17■■■□□ 2.26
LSM10-203ENST00000489912 G2E3Q7L622 706 aa29.17■■■□□ 2.26
LSM10-203ENST00000489912 SLX4Q8IY92 1834 aa29.17■■■□□ 2.26
LSM10-203ENST00000489912 E9PSI1 815 aa29.16■■■□□ 2.26
LSM10-203ENST00000489912 STYK1Q6J9G0 422 aa29.16■■■□□ 2.26
LSM10-203ENST00000489912 CDCA7LQ96GN5 454 aa29.16■■■□□ 2.26
LSM10-203ENST00000489912 MYD88Q99836 296 aa29.16■■■□□ 2.26
LSM10-203ENST00000489912 TRMT112Q9UI30 125 aaKnown RBP29.16■■■□□ 2.26
LSM10-203ENST00000489912 NPR1P16066 1061 aa29.14■■■□□ 2.26
LSM10-203ENST00000489912 CNKSR1Q969H4 720 aa29.14■■■□□ 2.26
LSM10-203ENST00000489912 ISCA1Q9BUE6 129 aa29.14■■■□□ 2.26
LSM10-203ENST00000489912 SLFN5Q08AF3 891 aa29.13■■■□□ 2.25
LSM10-203ENST00000489912 SYNE4Q8N205 404 aa29.13■■■□□ 2.25
LSM10-203ENST00000489912 MAP3K2Q9Y2U5 619 aa29.13■■■□□ 2.25
LSM10-203ENST00000489912 KLRG2A4D1S0 409 aaPredicted RBP29.12■■■□□ 2.25
LSM10-203ENST00000489912 PRPF40BQ6NWY9 871 aaKnown RBP29.12■■■□□ 2.25
LSM10-203ENST00000489912 LAMB2P55268 1798 aa29.11■■■□□ 2.25
LSM10-203ENST00000489912 PI4KAP2A4QPH2 592 aa29.11■■■□□ 2.25
LSM10-203ENST00000489912 C21orf2O43822 256 aa29.11■■■□□ 2.25
LSM10-203ENST00000489912 HCLS1P14317 486 aaPredicted RBP29.11■■■□□ 2.25
LSM10-203ENST00000489912 RTL5Q5HYW3 569 aaPredicted RBP29.11■■■□□ 2.25
LSM10-203ENST00000489912 KSR2Q6VAB6 950 aa29.11■■■□□ 2.25
LSM10-203ENST00000489912 C3orf67Q6ZVT6 689 aa29.11■■■□□ 2.25
LSM10-203ENST00000489912 PI4KAP1Q8N8J0 262 aa29.11■■■□□ 2.25
LSM10-203ENST00000489912 RPGRQ92834 1020 aaKnown RBP29.11■■■□□ 2.25
LSM10-203ENST00000489912 FLIIQ13045 1269 aa29.1■■■□□ 2.25
LSM10-203ENST00000489912 SH3TC1Q8TE82 1336 aa29.1■■■□□ 2.25
LSM10-203ENST00000489912 RASSF7Q02833 373 aa29.09■■■□□ 2.25
LSM10-203ENST00000489912 FKBP5Q13451 457 aaPredicted RBP29.09■■■□□ 2.25
LSM10-203ENST00000489912 FAM89AQ96GI7 184 aa29.09■■■□□ 2.25
LSM10-203ENST00000489912 NLRP3Q96P20 1036 aa29.09■■■□□ 2.25
LSM10-203ENST00000489912 METTL22Q9BUU2 404 aaPredicted RBP29.09■■■□□ 2.25
LSM10-203ENST00000489912 ADCY9O60503 1353 aa29.09■■■□□ 2.25
LSM10-203ENST00000489912 RIC1Q4ADV7 1423 aa29.09■■■□□ 2.25
LSM10-203ENST00000489912 RNF123Q5XPI4 1314 aa29.08■■■□□ 2.25
LSM10-203ENST00000489912 SBF1O95248 1867 aa29.08■■■□□ 2.25
LSM10-203ENST00000489912 CCDC88AQ3V6T2 1871 aa29.08■■■□□ 2.25
LSM10-203ENST00000489912 HNRNPUQ00839 825 aaKnown RBP eCLIP29.07■■■□□ 2.24
LSM10-203ENST00000489912 CRY2Q49AN0 593 aa29.07■■■□□ 2.24
LSM10-203ENST00000489912 DDX60Q8IY21 1712 aaKnown RBP29.07■■■□□ 2.24
LSM10-203ENST00000489912 SLC10A5Q5PT55 438 aa29.06■■■□□ 2.24
LSM10-203ENST00000489912 ALDH1B1P30837 517 aa29.05■■■□□ 2.24
LSM10-203ENST00000489912 TRIM28Q13263 835 aaKnown RBP29.05■■■□□ 2.24
LSM10-203ENST00000489912 ZNF784Q8NCA9 323 aaPredicted RBP29.05■■■□□ 2.24
LSM10-203ENST00000489912 NEXNQ0ZGT2 675 aa29.04■■■□□ 2.24
LSM10-203ENST00000489912 C9orf131Q5VYM1 1079 aa29.04■■■□□ 2.24
LSM10-203ENST00000489912 JARID2Q92833 1246 aaPredicted RBP29.04■■■□□ 2.24
LSM10-203ENST00000489912 RBM17Q96I25 401 aaKnown RBP29.04■■■□□ 2.24
LSM10-203ENST00000489912 CWC25Q9NXE8 425 aaPredicted RBP29.04■■■□□ 2.24
LSM10-203ENST00000489912 FER1L6Q2WGJ9 1857 aa29.04■■■□□ 2.24
LSM10-203ENST00000489912 OLFM4Q6UX06 510 aa29.02■■■□□ 2.24
LSM10-203ENST00000489912 CCDC191Q8NCU4 936 aa29.02■■■□□ 2.24
LSM10-203ENST00000489912 RNF181Q9P0P0 153 aa29.02■■■□□ 2.24
LSM10-203ENST00000489912 TAF1P21675 1872 aa29.02■■■□□ 2.24
LSM10-203ENST00000489912 CWF19L2Q2TBE0 894 aaKnown RBP29.01■■■□□ 2.23
LSM10-203ENST00000489912 NFKBIEO00221 500 aa29■■■□□ 2.23
LSM10-203ENST00000489912 IRS4O14654 1257 aaPredicted RBP29■■■□□ 2.23
LSM10-203ENST00000489912 IGKV5-2P06315 115 aa29■■■□□ 2.23
LSM10-203ENST00000489912 HOXA10P31260 410 aaPredicted RBP29■■■□□ 2.23
LSM10-203ENST00000489912 ZBTB38Q8NAP3 1195 aaPredicted RBP29■■■□□ 2.23
LSM10-203ENST00000489912 ZNF526Q8TF50 670 aaPredicted RBP29■■■□□ 2.23
LSM10-203ENST00000489912 DNAAF4Q8WXU2 420 aa29■■■□□ 2.23
LSM10-203ENST00000489912 F6X3S4 739 aa28.99■■■□□ 2.23
LSM10-203ENST00000489912 TRMT2AQ8IZ69 625 aaKnown RBP28.99■■■□□ 2.23
LSM10-203ENST00000489912 SOGA3Q5TF21 947 aa28.98■■■□□ 2.23
LSM10-203ENST00000489912 C7orf43Q8WVR3 580 aa28.98■■■□□ 2.23
LSM10-203ENST00000489912 CRAMP1Q96RY5 1269 aa28.98■■■□□ 2.23
LSM10-203ENST00000489912 BCL2L13Q9BXK5 485 aa28.98■■■□□ 2.23
LSM10-203ENST00000489912 PCCAP05165 728 aaPredicted RBP28.97■■■□□ 2.23
LSM10-203ENST00000489912 CCDC93Q567U6 631 aa28.97■■■□□ 2.23
LSM10-203ENST00000489912 ABCC4O15439 1325 aa28.96■■■□□ 2.23
LSM10-203ENST00000489912 NEURL1BA8MQ27 555 aa28.96■■■□□ 2.23
LSM10-203ENST00000489912 PPEF1O14829 653 aaPredicted RBP28.96■■■□□ 2.23
LSM10-203ENST00000489912 DDX46Q7L014 1031 aaKnown RBP28.96■■■□□ 2.23
LSM10-203ENST00000489912 TAOK3Q9H2K8 898 aa28.96■■■□□ 2.23
LSM10-203ENST00000489912 LMNB1P20700 586 aa28.95■■■□□ 2.22
LSM10-203ENST00000489912 PRELPP51888 382 aa28.95■■■□□ 2.22
LSM10-203ENST00000489912 SLC51AQ86UW1 340 aa28.95■■■□□ 2.22
LSM10-203ENST00000489912 MRPL50Q8N5N7 158 aaKnown RBP28.95■■■□□ 2.22
LSM10-203ENST00000489912 SSH1Q8WYL5 1049 aa28.95■■■□□ 2.22
LSM10-203ENST00000489912 TIAM2Q8IVF5 1701 aa28.93■■■□□ 2.22
LSM10-203ENST00000489912 SLC4A10Q6U841 1118 aa28.92■■■□□ 2.22
LSM10-203ENST00000489912 MYH3P11055 1940 aa28.92■■■□□ 2.22
LSM10-203ENST00000489912 DICER1Q9UPY3 1922 aaKnown RBP28.92■■■□□ 2.22
LSM10-203ENST00000489912 HSP90B1P14625 803 aaKnown RBP28.91■■■□□ 2.22
LSM10-203ENST00000489912 LINS1Q8NG48 757 aa28.91■■■□□ 2.22
LSM10-203ENST00000489912 CCDC85AQ96PX6 553 aaPredicted RBP28.91■■■□□ 2.22
LSM10-203ENST00000489912 SMC4Q9NTJ3 1288 aa28.91■■■□□ 2.22
LSM10-203ENST00000489912 GCKRQ14397 625 aa28.9■■■□□ 2.22
LSM10-203ENST00000489912 SF3B3Q15393 1217 aaKnown RBP28.9■■■□□ 2.22
LSM10-203ENST00000489912 UBE3BQ7Z3V4 1068 aa28.9■■■□□ 2.22
LSM10-203ENST00000489912 RTKN2Q8IZC4 609 aa28.9■■■□□ 2.22
LSM10-203ENST00000489912 PDE8AO60658 829 aa28.89■■■□□ 2.22
LSM10-203ENST00000489912 GRAPQ13588 217 aa28.89■■■□□ 2.22
LSM10-203ENST00000489912 GRAPLQ8TC17 118 aaPredicted RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms