RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
GGPS1-207ENST00000489692 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
GGPS1-207ENST00000489692 NTSR2O95665 410 aa15.15■□□□□ 0.02
GGPS1-207ENST00000489692 APLP1P51693 650 aa15.15■□□□□ 0.02
GGPS1-207ENST00000489692 GNAI1P63096 354 aa15.15■□□□□ 0.02
GGPS1-207ENST00000489692 FKBP4Q02790 459 aaKnown RBP eCLIP15.15■□□□□ 0.02
GGPS1-207ENST00000489692 DBF4Q9UBU7 674 aaPredicted RBP15.15■□□□□ 0.02
GGPS1-207ENST00000489692 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
GGPS1-207ENST00000489692 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
GGPS1-207ENST00000489692 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
GGPS1-207ENST00000489692 KDM3BQ7LBC6 1761 aa15.14■□□□□ 0.01
GGPS1-207ENST00000489692 LRP10Q7Z4F1 713 aa15.14■□□□□ 0.01
GGPS1-207ENST00000489692 SMC1BQ8NDV3 1235 aa15.14■□□□□ 0.01
GGPS1-207ENST00000489692 IFT57Q9NWB7 429 aa15.14■□□□□ 0.01
GGPS1-207ENST00000489692 TRMT112Q9UI30 125 aaKnown RBP15.14■□□□□ 0.01
GGPS1-207ENST00000489692 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
GGPS1-207ENST00000489692 HOXB7P09629 217 aa15.13■□□□□ 0.01
GGPS1-207ENST00000489692 FSTL1Q12841 308 aa15.13■□□□□ 0.01
GGPS1-207ENST00000489692 SYNE4Q8N205 404 aa15.13■□□□□ 0.01
GGPS1-207ENST00000489692 C7orf43Q8WVR3 580 aa15.13■□□□□ 0.01
GGPS1-207ENST00000489692 DLG5Q8TDM6 1919 aa15.13■□□□□ 0.01
GGPS1-207ENST00000489692 IBTKQ9P2D0 1353 aaPredicted RBP15.12■□□□□ 0.01
GGPS1-207ENST00000489692 LAMB4A4D0S4 1761 aa15.12■□□□□ 0.01
GGPS1-207ENST00000489692 PPEF1O14829 653 aaPredicted RBP15.12■□□□□ 0.01
GGPS1-207ENST00000489692 DDNO94850 711 aaPredicted RBP15.12■□□□□ 0.01
GGPS1-207ENST00000489692 HCLS1P14317 486 aaPredicted RBP15.12■□□□□ 0.01
GGPS1-207ENST00000489692 TCIRG1Q13488 830 aa15.12■□□□□ 0.01
GGPS1-207ENST00000489692 CRY2Q49AN0 593 aa15.12■□□□□ 0.01
GGPS1-207ENST00000489692 ANKRD13DQ6ZTN6 518 aa15.12■□□□□ 0.01
GGPS1-207ENST00000489692 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
GGPS1-207ENST00000489692 HYPKQ9NX55 129 aa15.12■□□□□ 0.01
GGPS1-207ENST00000489692 PPP4R2Q9NY27 417 aa15.12■□□□□ 0.01
GGPS1-207ENST00000489692 GOLGA2Q08379 1002 aa15.11■□□□□ 0.01
GGPS1-207ENST00000489692 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
GGPS1-207ENST00000489692 PLBD2Q8NHP8 589 aa15.11■□□□□ 0.01
GGPS1-207ENST00000489692 JDP2Q8WYK2 163 aa15.11■□□□□ 0.01
GGPS1-207ENST00000489692 ANKRD31Q8N7Z5 1873 aa15.1■□□□□ 0.01
GGPS1-207ENST00000489692 COL11A2P13942 1736 aaPredicted RBP15.1■□□□□ 0.01
GGPS1-207ENST00000489692 ATP5J2-PTCD1G3V325 749 aa15.1■□□□□ 0.01
GGPS1-207ENST00000489692 HOXA10P31260 410 aaPredicted RBP15.1■□□□□ 0.01
GGPS1-207ENST00000489692 IARSP41252 1262 aaKnown RBP15.1■□□□□ 0.01
GGPS1-207ENST00000489692 CC2D2BQ6DHV5 1058 aa15.1■□□□□ 0.01
GGPS1-207ENST00000489692 RIC3Q7Z5B4 369 aa15.1■□□□□ 0.01
GGPS1-207ENST00000489692 CRAMP1Q96RY5 1269 aa15.1■□□□□ 0.01
GGPS1-207ENST00000489692 SH3TC1Q8TE82 1336 aa15.1■□□□□ 0.01
GGPS1-207ENST00000489692 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
GGPS1-207ENST00000489692 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
GGPS1-207ENST00000489692 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
GGPS1-207ENST00000489692 DLEC1Q9Y238 1755 aa15.08■□□□□ 0.01
GGPS1-207ENST00000489692 IQCA1LA6NCM1 817 aa15.08■□□□□ 0
GGPS1-207ENST00000489692 ZNF853P0CG23 659 aa15.08■□□□□ 0
GGPS1-207ENST00000489692 HTRA3P83110 453 aa15.08■□□□□ 0
GGPS1-207ENST00000489692 SLC10A5Q5PT55 438 aa15.08■□□□□ 0
GGPS1-207ENST00000489692 LARGE2Q8N3Y3 721 aa15.08■□□□□ 0
GGPS1-207ENST00000489692 CHMP4AQ9BY43 222 aa15.08■□□□□ 0
GGPS1-207ENST00000489692 CEP350Q5VT06 3117 aa15.08■□□□□ 0
GGPS1-207ENST00000489692 EIF6P56537 245 aaKnown RBP15.07■□□□□ 0
GGPS1-207ENST00000489692 GRIPAP1Q4V328 841 aa15.07■□□□□ 0
GGPS1-207ENST00000489692 CCDC30Q5VVM6 783 aa15.07■□□□□ 0
GGPS1-207ENST00000489692 C8orf58Q8NAV2 365 aa15.07■□□□□ 0
GGPS1-207ENST00000489692 TSR2Q969E8 191 aaKnown RBP15.07■□□□□ 0
GGPS1-207ENST00000489692 FAM89AQ96GI7 184 aa15.07■□□□□ 0
GGPS1-207ENST00000489692 PSMD1Q99460 953 aa15.07■□□□□ 0
GGPS1-207ENST00000489692 GJA3Q9Y6H8 435 aa15.07■□□□□ 0
GGPS1-207ENST00000489692 ZNF541Q9H0D2 1346 aa15.07■□□□□ 0
GGPS1-207ENST00000489692 SLX4Q8IY92 1834 aa15.06■□□□□ 0
GGPS1-207ENST00000489692 EAPPQ56P03 285 aaPredicted RBP15.06■□□□□ 0
GGPS1-207ENST00000489692 NIM1KQ8IY84 436 aa15.06■□□□□ 0
GGPS1-207ENST00000489692 PHAXQ9H814 394 aaKnown RBP15.06■□□□□ 0
GGPS1-207ENST00000489692 CLEC11AQ9Y240 323 aa15.06■□□□□ 0
GGPS1-207ENST00000489692 ABCC4O15439 1325 aa15.06■□□□□ 0
GGPS1-207ENST00000489692 RIC1Q4ADV7 1423 aa15.06■□□□□ 0
GGPS1-207ENST00000489692 POTECB2RU33 542 aa15.05■□□□□ -0
GGPS1-207ENST00000489692 PPIP5K2O43314 1243 aa15.05■□□□□ -0
GGPS1-207ENST00000489692 BBOX1O75936 387 aa15.05■□□□□ -0
GGPS1-207ENST00000489692 DDX58O95786 925 aaKnown RBP15.05■□□□□ -0
GGPS1-207ENST00000489692 DPP8Q6V1X1 898 aaPredicted RBP15.05■□□□□ -0
GGPS1-207ENST00000489692 SLC51AQ86UW1 340 aa15.05■□□□□ -0
GGPS1-207ENST00000489692 MYD88Q99836 296 aa15.05■□□□□ -0
GGPS1-207ENST00000489692 STK31Q9BXU1 1019 aa15.05■□□□□ -0
GGPS1-207ENST00000489692 ATP6V0A2Q9Y487 856 aa15.05■□□□□ -0
GGPS1-207ENST00000489692 GRAPQ13588 217 aa15.04■□□□□ -0
GGPS1-207ENST00000489692 CHADLQ6NUI6 762 aa15.04■□□□□ -0
GGPS1-207ENST00000489692 SUPT20HQ8NEM7 779 aa15.04■□□□□ -0
GGPS1-207ENST00000489692 GRAPLQ8TC17 118 aaPredicted RBP15.04■□□□□ -0
GGPS1-207ENST00000489692 ISCA1Q9BUE6 129 aa15.04■□□□□ -0
GGPS1-207ENST00000489692 HACL1Q9UJ83 578 aa15.04■□□□□ -0
GGPS1-207ENST00000489692 IRS4O14654 1257 aaPredicted RBP15.03■□□□□ -0
GGPS1-207ENST00000489692 LMOD1P29536 600 aaPredicted RBP15.03■□□□□ -0
GGPS1-207ENST00000489692 IRX6P78412 446 aaPredicted RBP15.03■□□□□ -0
GGPS1-207ENST00000489692 AOC3Q16853 763 aa15.03■□□□□ -0
GGPS1-207ENST00000489692 WWC1Q8IX03 1113 aa15.03■□□□□ -0
GGPS1-207ENST00000489692 MPNDQ8N594 471 aa15.03■□□□□ -0
GGPS1-207ENST00000489692 TSPYL6Q8N831 410 aa15.03■□□□□ -0
GGPS1-207ENST00000489692 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
GGPS1-207ENST00000489692 TNRC6CQ9HCJ0 1690 aaKnown RBP15.03■□□□□ -0
GGPS1-207ENST00000489692 ZNF521Q96K83 1311 aa15.02■□□□□ -0
GGPS1-207ENST00000489692 FZD9O00144 591 aa15.02■□□□□ -0
GGPS1-207ENST00000489692 POTEIP0CG38 1075 aa15.02■□□□□ -0
GGPS1-207ENST00000489692 POTEJP0CG39 1038 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms