RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ASAP1Q9ULH1 1129 aa11.98□□□□□ -0.49
NOD1-208ENST00000489614 TMOD3Q9NYL9 352 aa11.98□□□□□ -0.49
NOD1-208ENST00000489614 ARAP2Q8WZ64 1704 aa11.98□□□□□ -0.49
NOD1-208ENST00000489614 F6X3S4 739 aa11.97□□□□□ -0.49
NOD1-208ENST00000489614 KSR2Q6VAB6 950 aa11.97□□□□□ -0.49
NOD1-208ENST00000489614 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
NOD1-208ENST00000489614 USP44Q9H0E7 712 aa11.96□□□□□ -0.49
NOD1-208ENST00000489614 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.5
NOD1-208ENST00000489614 TTC5Q8N0Z6 440 aa11.96□□□□□ -0.5
NOD1-208ENST00000489614 ANKRD44Q8N8A2 993 aa11.96□□□□□ -0.5
NOD1-208ENST00000489614 MEIS3Q99687 375 aa11.96□□□□□ -0.5
NOD1-208ENST00000489614 CYP19A1P11511 503 aaPredicted RBP11.95□□□□□ -0.5
NOD1-208ENST00000489614 CEP85Q6P2H3 762 aa11.95□□□□□ -0.5
NOD1-208ENST00000489614 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
NOD1-208ENST00000489614 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
NOD1-208ENST00000489614 TRPC5Q9UL62 973 aaPredicted RBP11.95□□□□□ -0.5
NOD1-208ENST00000489614 DNAAF4Q8WXU2 420 aa11.95□□□□□ -0.5
NOD1-208ENST00000489614 AK9Q5TCS8 1911 aa11.95□□□□□ -0.5
NOD1-208ENST00000489614 NRXN2Q9P2S2 1712 aa11.95□□□□□ -0.5
NOD1-208ENST00000489614 ALDH1L1O75891 902 aa11.95□□□□□ -0.5
NOD1-208ENST00000489614 SASS6Q6UVJ0 657 aa11.95□□□□□ -0.5
NOD1-208ENST00000489614 ANXA1P04083 346 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 IGKV5-2P06315 115 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 EIF2S2P20042 333 aaKnown RBP11.94□□□□□ -0.5
NOD1-208ENST00000489614 CASP7P55210 303 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 TAF3Q5VWG9 929 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 NECTIN2Q92692 538 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 TEX13AQ9BXU3 409 aaPredicted RBP11.94□□□□□ -0.5
NOD1-208ENST00000489614 KCNG1Q9UIX4 513 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 ISY1Q9ULR0 285 aaKnown RBP11.94□□□□□ -0.5
NOD1-208ENST00000489614 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
NOD1-208ENST00000489614 FKBP5Q13451 457 aaPredicted RBP11.94□□□□□ -0.5
NOD1-208ENST00000489614 MTX1Q13505 466 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
NOD1-208ENST00000489614 UPF2Q9HAU5 1272 aaKnown RBP11.94□□□□□ -0.5
NOD1-208ENST00000489614 PI4KAP2A4QPH2 592 aa11.93□□□□□ -0.5
NOD1-208ENST00000489614 PI4KAP1Q8N8J0 262 aa11.93□□□□□ -0.5
NOD1-208ENST00000489614 POLA2Q14181 598 aa11.93□□□□□ -0.5
NOD1-208ENST00000489614 METTL22Q9BUU2 404 aaPredicted RBP11.93□□□□□ -0.5
NOD1-208ENST00000489614 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
NOD1-208ENST00000489614 RPAP2Q8IXW5 612 aaPredicted RBP11.92□□□□□ -0.5
NOD1-208ENST00000489614 CNPY4Q8N129 248 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 KAZALD1Q96I82 304 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 TRERF1Q96PN7 1200 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 RWDD1Q9H446 243 aaPredicted RBP11.92□□□□□ -0.5
NOD1-208ENST00000489614 MAP3K2Q9Y2U5 619 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 SPEF2Q9C093 1822 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 INTS5Q6P9B9 1019 aaKnown RBP11.92□□□□□ -0.5
NOD1-208ENST00000489614 PLBD2Q8NHP8 589 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 DCTPP1Q9H773 170 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 NUCB1Q02818 461 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 ZNF710Q8N1W2 664 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 XAGE3Q8WTP9 111 aa11.92□□□□□ -0.5
NOD1-208ENST00000489614 LINS1Q8NG48 757 aa11.91□□□□□ -0.5
NOD1-208ENST00000489614 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.91□□□□□ -0.5
NOD1-208ENST00000489614 APPP05067 770 aa11.91□□□□□ -0.5
NOD1-208ENST00000489614 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
NOD1-208ENST00000489614 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
NOD1-208ENST00000489614 NOL7Q9UMY1 257 aaKnown RBP11.91□□□□□ -0.5
NOD1-208ENST00000489614 EP400Q96L91 3159 aa11.91□□□□□ -0.5
NOD1-208ENST00000489614 NEURL1BA8MQ27 555 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
NOD1-208ENST00000489614 ITPK1Q13572 414 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 COPS6Q7L5N1 327 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.5
NOD1-208ENST00000489614 SALL3Q9BXA9 1300 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 RGL2O15211 777 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 KCNQ2O43526 872 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 ZNF500O60304 480 aaPredicted RBP11.9□□□□□ -0.5
NOD1-208ENST00000489614 PTF1AQ7RTS3 328 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 GCC1Q96CN9 775 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 TRIM34Q9BYJ4 488 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
NOD1-208ENST00000489614 A1BGP04217 495 aa11.9□□□□□ -0.51
NOD1-208ENST00000489614 ATP8B2P98198 1209 aa11.9□□□□□ -0.51
NOD1-208ENST00000489614 CSPP1Q1MSJ5 1256 aa11.9□□□□□ -0.51
NOD1-208ENST00000489614 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.51
NOD1-208ENST00000489614 CNTNAP4Q9C0A0 1308 aa11.89□□□□□ -0.51
NOD1-208ENST00000489614 GNAI3P08754 354 aa11.89□□□□□ -0.51
NOD1-208ENST00000489614 MPNDQ8N594 471 aa11.89□□□□□ -0.51
NOD1-208ENST00000489614 SSH3Q8TE77 659 aa11.89□□□□□ -0.51
NOD1-208ENST00000489614 HDAC5Q9UQL6 1122 aa11.89□□□□□ -0.51
NOD1-208ENST00000489614 KAT6BQ8WYB5 2073 aa11.89□□□□□ -0.51
NOD1-208ENST00000489614 TRIM28Q13263 835 aaKnown RBP11.89□□□□□ -0.51
NOD1-208ENST00000489614 DNAJC2Q99543 621 aaKnown RBP11.89□□□□□ -0.51
NOD1-208ENST00000489614 PDZRN3Q9UPQ7 1066 aa11.89□□□□□ -0.51
NOD1-208ENST00000489614 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 U2AF2P26368 475 aaKnown RBP eCLIP11.88□□□□□ -0.51
NOD1-208ENST00000489614 FBXO41Q8TF61 875 aa11.88□□□□□ -0.51
NOD1-208ENST00000489614 COL4A1P02462 1669 aa11.88□□□□□ -0.51
NOD1-208ENST00000489614 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 GNAI2P04899 355 aa11.88□□□□□ -0.51
NOD1-208ENST00000489614 EIF5P55010 431 aaKnown RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
NOD1-208ENST00000489614 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
NOD1-208ENST00000489614 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
NOD1-208ENST00000489614 SEPT12Q8IYM1 358 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms