RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ABCC12Q96J65 1359 aa10.08□□□□□ -0.8
SSR1-210ENST00000489567 ANKRD36CQ5JPF3 1778 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 PI4KAP2A4QPH2 592 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 NTSR2O95665 410 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 YBX3P16989 372 aaKnown RBP eCLIP10.07□□□□□ -0.84e-9■□□□□ 11.3
SSR1-210ENST00000489567 ERFEQ4G0M1 354 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 PI4KAP1Q8N8J0 262 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 SSH1Q8WYL5 1049 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 ISCA1Q9BUE6 129 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 BCL2L13Q9BXK5 485 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 MAP3K2Q9Y2U5 619 aa10.07□□□□□ -0.8
SSR1-210ENST00000489567 NPHP1O15259 732 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 KSR2Q6VAB6 950 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 TPTE2Q6XPS3 522 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
SSR1-210ENST00000489567 MYD88Q99836 296 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 BRIP1Q9BX63 1249 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 F6X3S4 739 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
SSR1-210ENST00000489567 ST5P78524 1137 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 FKBP5Q13451 457 aaPredicted RBP10.06□□□□□ -0.8
SSR1-210ENST00000489567 PARP10Q53GL7 1025 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 HSP90AB3PQ58FF7 597 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 METTL22Q9BUU2 404 aaPredicted RBP10.06□□□□□ -0.8
SSR1-210ENST00000489567 TNRC6CQ9HCJ0 1690 aaKnown RBP10.06□□□□□ -0.8
SSR1-210ENST00000489567 GTF3C3Q9Y5Q9 886 aa10.06□□□□□ -0.8
SSR1-210ENST00000489567 COL11A2P13942 1736 aaPredicted RBP10.05□□□□□ -0.8
SSR1-210ENST00000489567 IBTKQ9P2D0 1353 aaPredicted RBP10.05□□□□□ -0.8
SSR1-210ENST00000489567 IGKV5-2P06315 115 aa10.05□□□□□ -0.8
SSR1-210ENST00000489567 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
SSR1-210ENST00000489567 PPP1R42Q7Z4L9 355 aa10.05□□□□□ -0.8
SSR1-210ENST00000489567 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
SSR1-210ENST00000489567 UTP14AQ9BVJ6 771 aaKnown RBP10.05□□□□□ -0.8
SSR1-210ENST00000489567 NYXQ9GZU5 481 aa10.05□□□□□ -0.8
SSR1-210ENST00000489567 GTF2E1P29083 439 aaPredicted RBP10.04□□□□□ -0.8
SSR1-210ENST00000489567 TRIM28Q13263 835 aaKnown RBP10.04□□□□□ -0.8
SSR1-210ENST00000489567 GPR162Q16538 588 aa10.04□□□□□ -0.8
SSR1-210ENST00000489567 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
SSR1-210ENST00000489567 BRCA1P38398 1863 aaKnown RBP10.04□□□□□ -0.8
SSR1-210ENST00000489567 KLRG2A4D1S0 409 aaPredicted RBP10.04□□□□□ -0.8
SSR1-210ENST00000489567 PDE6BP35913 854 aa10.04□□□□□ -0.8
SSR1-210ENST00000489567 RTL5Q5HYW3 569 aaPredicted RBP10.04□□□□□ -0.8
SSR1-210ENST00000489567 JARID2Q92833 1246 aaPredicted RBP10.04□□□□□ -0.8
SSR1-210ENST00000489567 FAM89AQ96GI7 184 aa10.04□□□□□ -0.8
SSR1-210ENST00000489567 TRMT112Q9UI30 125 aaKnown RBP10.04□□□□□ -0.8
SSR1-210ENST00000489567 CACNA1FO60840 1977 aa10.03□□□□□ -0.8
SSR1-210ENST00000489567 H0YIN7 160 aa10.03□□□□□ -0.8
SSR1-210ENST00000489567 CT47B1P0C2W7 299 aaPredicted RBP10.03□□□□□ -0.8
SSR1-210ENST00000489567 SRGNP10124 158 aa10.03□□□□□ -0.8
SSR1-210ENST00000489567 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
SSR1-210ENST00000489567 RARSP54136 660 aaKnown RBP10.03□□□□□ -0.8
SSR1-210ENST00000489567 ALDH1L2Q3SY69 923 aa10.03□□□□□ -0.8
SSR1-210ENST00000489567 DNAAF4Q8WXU2 420 aa10.03□□□□□ -0.8
SSR1-210ENST00000489567 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
SSR1-210ENST00000489567 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
SSR1-210ENST00000489567 BCS1LQ9Y276 419 aa10.03□□□□□ -0.8
SSR1-210ENST00000489567 SH3TC1Q8TE82 1336 aa10.02□□□□□ -0.8
SSR1-210ENST00000489567 NEURL1BA8MQ27 555 aa10.02□□□□□ -0.8
SSR1-210ENST00000489567 SLC10A5Q5PT55 438 aa10.02□□□□□ -0.8
SSR1-210ENST00000489567 CCDC191Q8NCU4 936 aa10.02□□□□□ -0.8
SSR1-210ENST00000489567 DLEC1Q9Y238 1755 aa10.02□□□□□ -0.8
SSR1-210ENST00000489567 CAPN15O75808 1086 aa10.02□□□□□ -0.81
SSR1-210ENST00000489567 CRY2Q49AN0 593 aa10.02□□□□□ -0.81
SSR1-210ENST00000489567 BEND3Q5T5X7 828 aa10.02□□□□□ -0.81
SSR1-210ENST00000489567 ZNF622Q969S3 477 aaKnown RBP eCLIP10.02□□□□□ -0.811e-9■■■□□ 15.3
SSR1-210ENST00000489567 CWC25Q9NXE8 425 aaPredicted RBP10.02□□□□□ -0.81
SSR1-210ENST00000489567 RIC1Q4ADV7 1423 aa10.01□□□□□ -0.81
SSR1-210ENST00000489567 RNF123Q5XPI4 1314 aa10.01□□□□□ -0.81
SSR1-210ENST00000489567 BCAR3O75815 825 aa10.01□□□□□ -0.81
SSR1-210ENST00000489567 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
SSR1-210ENST00000489567 DALRD3Q5D0E6 543 aaKnown RBP10.01□□□□□ -0.81
SSR1-210ENST00000489567 SLC51AQ86UW1 340 aa10.01□□□□□ -0.81
SSR1-210ENST00000489567 ZBTB38Q8NAP3 1195 aaPredicted RBP10.01□□□□□ -0.81
SSR1-210ENST00000489567 YTHDC1Q96MU7 727 aaKnown RBP10.01□□□□□ -0.81
SSR1-210ENST00000489567 STYK1Q6J9G0 422 aa10□□□□□ -0.81
SSR1-210ENST00000489567 SLC4A10Q6U841 1118 aa10□□□□□ -0.81
SSR1-210ENST00000489567 TTLL6Q8N841 843 aa10□□□□□ -0.81
SSR1-210ENST00000489567 LINS1Q8NG48 757 aa10□□□□□ -0.81
SSR1-210ENST00000489567 MASTLQ96GX5 879 aa10□□□□□ -0.81
SSR1-210ENST00000489567 BCL11AQ9H165 835 aa10□□□□□ -0.81
SSR1-210ENST00000489567 NOB1Q9ULX3 412 aaKnown RBP10□□□□□ -0.81
SSR1-210ENST00000489567 DDX60Q8IY21 1712 aaKnown RBP10□□□□□ -0.81
SSR1-210ENST00000489567 PTPRCP08575 1304 aa10□□□□□ -0.81
SSR1-210ENST00000489567 IRS4O14654 1257 aaPredicted RBP10□□□□□ -0.81
SSR1-210ENST00000489567 PCCAP05165 728 aaPredicted RBP10□□□□□ -0.81
SSR1-210ENST00000489567 NPR1P16066 1061 aa10□□□□□ -0.81
SSR1-210ENST00000489567 BRPF1P55201 1214 aaPredicted RBP10□□□□□ -0.81
SSR1-210ENST00000489567 GCKRQ14397 625 aa10□□□□□ -0.81
SSR1-210ENST00000489567 NLRP3Q96P20 1036 aa10□□□□□ -0.81
SSR1-210ENST00000489567 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
SSR1-210ENST00000489567 PDZRN3Q9UPQ7 1066 aa10□□□□□ -0.81
SSR1-210ENST00000489567 LAMB2P55268 1798 aa9.99□□□□□ -0.81
SSR1-210ENST00000489567 SLX4Q8IY92 1834 aa9.99□□□□□ -0.81
SSR1-210ENST00000489567 CASP7P55210 303 aa9.99□□□□□ -0.81
SSR1-210ENST00000489567 PRPF40BQ6NWY9 871 aaKnown RBP9.99□□□□□ -0.81
SSR1-210ENST00000489567 OLFM4Q6UX06 510 aa9.99□□□□□ -0.81
SSR1-210ENST00000489567 TNNQ9UQP3 1299 aa9.99□□□□□ -0.81
SSR1-210ENST00000489567 COL4A1P02462 1669 aa9.98□□□□□ -0.81
SSR1-210ENST00000489567 H7C1W4 665 aa9.98□□□□□ -0.81
SSR1-210ENST00000489567 C21orf2O43822 256 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms