RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 PDGFAP04085 211 aa6.09□□□□□ -1.43
AC055855.1-201ENST00000489563 TYRO3Q06418 890 aa6.09□□□□□ -1.43
AC055855.1-201ENST00000489563 C8orf34Q49A92 452 aa6.09□□□□□ -1.43
AC055855.1-201ENST00000489563 FOXR1Q6PIV2 292 aa6.09□□□□□ -1.43
AC055855.1-201ENST00000489563 RBCK1Q9BYM8 510 aa6.09□□□□□ -1.43
AC055855.1-201ENST00000489563 USP20Q9Y2K6 914 aa6.09□□□□□ -1.43
AC055855.1-201ENST00000489563 ANKRD33BA6NCL7 494 aa6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 RPLP1P05386 114 aaKnown RBP6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 THBS1P07996 1170 aa6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 ERCC3P19447 782 aa6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 PDE3BQ13370 1112 aa6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 VWA5B2Q8N398 1253 aa6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 GTPBP3Q969Y2 492 aaKnown RBP6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 ZNF837Q96EG3 531 aaPredicted RBP6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 ASB16Q96NS5 453 aa6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 FNDC3AQ9Y2H6 1198 aaKnown RBP6.08□□□□□ -1.44
AC055855.1-201ENST00000489563 BNIP3LO60238 219 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 FAM157BP0CG42 384 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 MAPTP10636 758 aaKnown RBP6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 TNP2Q05952 138 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 SFSWAPQ12872 951 aaKnown RBP6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 ZNF787Q6DD87 383 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 DNAJC14Q6Y2X3 702 aaPredicted RBP6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 SV2AQ7L0J3 742 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 TMC7Q7Z402 723 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 RGS22Q8NE09 1264 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 TRERF1Q96PN7 1200 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 PHF24Q9UPV7 400 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 KCNH4Q9UQ05 1017 aa6.07□□□□□ -1.44
AC055855.1-201ENST00000489563 UBAP1LF5GYI3 381 aa6.06□□□□□ -1.44
AC055855.1-201ENST00000489563 EHHADHQ08426 723 aa6.06□□□□□ -1.44
AC055855.1-201ENST00000489563 UBAP2LQ14157 1087 aaKnown RBP6.06□□□□□ -1.44
AC055855.1-201ENST00000489563 ABHD17AQ96GS6 310 aa6.06□□□□□ -1.44
AC055855.1-201ENST00000489563 DMRTB1Q96MA1 342 aa6.06□□□□□ -1.44
AC055855.1-201ENST00000489563 GGNBP2Q9H3C7 697 aa6.06□□□□□ -1.44
AC055855.1-201ENST00000489563 MARK1Q9P0L2 795 aa6.06□□□□□ -1.44
AC055855.1-201ENST00000489563 NXF1Q9UBU9 619 aaKnown RBP6.06□□□□□ -1.44
AC055855.1-201ENST00000489563 A6NHS1 94 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 GPR25O00155 361 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 EFSO43281 561 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 XYLBO75191 536 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 VEGFBP49765 207 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 PLCB3Q01970 1234 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 LAMC2Q13753 1193 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 GJD3Q8N144 294 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 FOXD4L4Q8WXT5 416 aaPredicted RBP6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 NIF3L1Q9GZT8 377 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 ATXN7L1Q9ULK2 861 aaPredicted RBP6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 KCNMB2Q9Y691 235 aa6.05□□□□□ -1.44
AC055855.1-201ENST00000489563 CD33P20138 364 aa6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 GRNP28799 593 aaKnown RBP6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 KCNQ4P56696 695 aa6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 ZNF438Q7Z4V0 828 aa6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 NANOS1Q8WY41 292 aaKnown RBP6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 PNMA5Q96PV4 448 aa6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 FAM129BQ96TA1 746 aa6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 CFHR5Q9BXR6 569 aa6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 STRN4Q9NRL3 753 aa6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 NDFIP2Q9NV92 336 aa6.04□□□□□ -1.44
AC055855.1-201ENST00000489563 NEFLP07196 543 aa6.03□□□□□ -1.44
AC055855.1-201ENST00000489563 FGFR3P22607 806 aa6.03□□□□□ -1.44
AC055855.1-201ENST00000489563 CCINQ13939 588 aa6.03□□□□□ -1.44
AC055855.1-201ENST00000489563 TRIP4Q15650 581 aaPredicted RBP6.03□□□□□ -1.44
AC055855.1-201ENST00000489563 PDE12Q6L8Q7 609 aaKnown RBP6.03□□□□□ -1.44
AC055855.1-201ENST00000489563 KRT25Q7Z3Z0 450 aa6.03□□□□□ -1.44
AC055855.1-201ENST00000489563 C11orf16Q9NQ32 467 aa6.03□□□□□ -1.44
AC055855.1-201ENST00000489563 GPR182O15218 404 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 TREHO43280 583 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 SASH3O75995 380 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 EGFRP00533 1210 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 TARSP26639 723 aaKnown RBP6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 MAPK8P45983 427 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 SPEM2Q0P670 501 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 GRIN2CQ14957 1233 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 TTC39BQ5VTQ0 682 aaPredicted RBP6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 NLRP13Q86W25 1043 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 NPAS4Q8IUM7 802 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 NPAS3Q8IXF0 933 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 BCL2L13Q9BXK5 485 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 GSX2Q9BZM3 304 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 ELP3Q9H9T3 547 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 PRR12Q9ULL5 1215 aa6.02□□□□□ -1.45
AC055855.1-201ENST00000489563 IGHA2P01877 340 aa6.01□□□□□ -1.45
AC055855.1-201ENST00000489563 CTBSQ01459 385 aa6.01□□□□□ -1.45
AC055855.1-201ENST00000489563 NEUROD1Q13562 356 aa6.01□□□□□ -1.45
AC055855.1-201ENST00000489563 EAPPQ56P03 285 aaPredicted RBP6.01□□□□□ -1.45
AC055855.1-201ENST00000489563 XKR5Q6UX68 686 aa6.01□□□□□ -1.45
AC055855.1-201ENST00000489563 SLC16A10Q8TF71 515 aa6.01□□□□□ -1.45
AC055855.1-201ENST00000489563 ALKBH8Q96BT7 664 aaKnown RBP6.01□□□□□ -1.45
AC055855.1-201ENST00000489563 AMOTL2Q9Y2J4 779 aa6.01□□□□□ -1.45
AC055855.1-201ENST00000489563 H3BM21 787 aa6□□□□□ -1.45
AC055855.1-201ENST00000489563 TNFRSF21O75509 655 aa6□□□□□ -1.45
AC055855.1-201ENST00000489563 P4HBP07237 508 aaKnown RBP6□□□□□ -1.45
AC055855.1-201ENST00000489563 RARAP10276 462 aa6□□□□□ -1.45
AC055855.1-201ENST00000489563 BMP4P12644 408 aa6□□□□□ -1.45
AC055855.1-201ENST00000489563 MX2P20592 715 aa6□□□□□ -1.45
AC055855.1-201ENST00000489563 DSC3Q14574 896 aa6□□□□□ -1.45
AC055855.1-201ENST00000489563 COL19A1Q14993 1142 aa6□□□□□ -1.45
AC055855.1-201ENST00000489563 FAM182BQ5T319 152 aa6□□□□□ -1.45
AC055855.1-201ENST00000489563 RAB44Q7Z6P3 723 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms