RNA–Protein interactions for RNA: ENST00000489548.1

PHACTR1-210, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 5

Gene PHACTR1, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-210ENST00000489548 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
PHACTR1-210ENST00000489548 RBM19Q9Y4C8 960 aaKnown RBP12.09□□□□□ -0.47
PHACTR1-210ENST00000489548 ZNF541Q9H0D2 1346 aa12.09□□□□□ -0.47
PHACTR1-210ENST00000489548 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.47
PHACTR1-210ENST00000489548 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 TCERG1O14776 1098 aaKnown RBP12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 EPHX2P34913 555 aa12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 LBX1P52954 281 aa12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 OLFM4Q6UX06 510 aa12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 RTKN2Q8IZC4 609 aa12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 EXOC6Q8TAG9 804 aa12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 SCN4AP35499 1836 aa12.08□□□□□ -0.48
PHACTR1-210ENST00000489548 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 RASSF10A6NK89 507 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 CACNA1SQ13698 1873 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 DEFB115Q30KQ5 88 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 PNMA8AQ86V59 439 aaPredicted RBP12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 CNTROBQ8N137 903 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 FANCIQ9NVI1 1328 aa12.07□□□□□ -0.48
PHACTR1-210ENST00000489548 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
PHACTR1-210ENST00000489548 FZD9O00144 591 aa12.06□□□□□ -0.48
PHACTR1-210ENST00000489548 MAP1SQ66K74 1059 aaPredicted RBP12.06□□□□□ -0.48
PHACTR1-210ENST00000489548 SYNE4Q8N205 404 aa12.06□□□□□ -0.48
PHACTR1-210ENST00000489548 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
PHACTR1-210ENST00000489548 NIP7Q9Y221 180 aaKnown RBP eCLIP12.06□□□□□ -0.48
PHACTR1-210ENST00000489548 ARFGEF2Q9Y6D5 1785 aa12.05□□□□□ -0.48
PHACTR1-210ENST00000489548 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
PHACTR1-210ENST00000489548 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
PHACTR1-210ENST00000489548 IARSP41252 1262 aaKnown RBP12.05□□□□□ -0.48
PHACTR1-210ENST00000489548 GPC2Q8N158 579 aa12.05□□□□□ -0.48
PHACTR1-210ENST00000489548 FAM177BA6PVY3 158 aa12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 RGL2O15211 777 aa12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 HSPA8P11142 646 aaKnown RBP12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 PRKAR2BP31323 418 aa12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 TMPOP42166 694 aaKnown RBP12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 MAP2K1Q02750 393 aaPredicted RBP12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 NBPF10Q6P3W6 841 aaKnown RBP12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 NBPF15Q8N660 670 aa12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 BCORQ6W2J9 1755 aa12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 WDR33Q9C0J8 1336 aaKnown RBP12.04□□□□□ -0.48
PHACTR1-210ENST00000489548 ADAMTSL1Q8N6G6 1762 aa12.03□□□□□ -0.48
PHACTR1-210ENST00000489548 HLFQ16534 295 aa12.03□□□□□ -0.48
PHACTR1-210ENST00000489548 JDP2Q8WYK2 163 aa12.03□□□□□ -0.48
PHACTR1-210ENST00000489548 ABHD8Q96I13 439 aa12.03□□□□□ -0.48
PHACTR1-210ENST00000489548 CRBNQ96SW2 442 aa12.03□□□□□ -0.48
PHACTR1-210ENST00000489548 PSMD1Q99460 953 aa12.03□□□□□ -0.48
PHACTR1-210ENST00000489548 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
PHACTR1-210ENST00000489548 ABT1Q9ULW3 272 aaKnown RBP12.03□□□□□ -0.48
PHACTR1-210ENST00000489548 GTF2E1P29083 439 aaPredicted RBP12.02□□□□□ -0.49
PHACTR1-210ENST00000489548 MCM10Q7L590 875 aa12.02□□□□□ -0.49
PHACTR1-210ENST00000489548 RTF1Q92541 710 aaKnown RBP12.02□□□□□ -0.49
PHACTR1-210ENST00000489548 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
PHACTR1-210ENST00000489548 DDX21Q9NR30 783 aaKnown RBP eCLIP12.02□□□□□ -0.49
PHACTR1-210ENST00000489548 PLIN1O60240 522 aa12.01□□□□□ -0.49
PHACTR1-210ENST00000489548 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
PHACTR1-210ENST00000489548 EIF6P56537 245 aaKnown RBP12.01□□□□□ -0.49
PHACTR1-210ENST00000489548 CRY2Q49AN0 593 aa12.01□□□□□ -0.49
PHACTR1-210ENST00000489548 GJA3Q9Y6H8 435 aa12.01□□□□□ -0.49
PHACTR1-210ENST00000489548 SLC34A2O95436 690 aa12□□□□□ -0.49
PHACTR1-210ENST00000489548 RIPK4P57078 832 aa12□□□□□ -0.49
PHACTR1-210ENST00000489548 FMR1Q06787 632 aaKnown RBP eCLIP12□□□□□ -0.49
PHACTR1-210ENST00000489548 DCTN1Q14203 1278 aa12□□□□□ -0.49
PHACTR1-210ENST00000489548 NEUROD2Q15784 382 aa12□□□□□ -0.49
PHACTR1-210ENST00000489548 FAM161AQ3B820 660 aa12□□□□□ -0.49
PHACTR1-210ENST00000489548 CC2D2BQ6DHV5 1058 aa12□□□□□ -0.49
PHACTR1-210ENST00000489548 SNED1Q8TER0 1413 aa12□□□□□ -0.49
PHACTR1-210ENST00000489548 LMOD1P29536 600 aaPredicted RBP11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 EPS15P42566 896 aa11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 SCNN1DP51172 638 aa11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 NFE2L2Q16236 605 aa11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 CST9Q5W186 159 aa11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 NUTM1Q86Y26 1132 aa11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 CAPNS2Q96L46 248 aa11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 GPR101Q96P66 508 aaPredicted RBP11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 NYXQ9GZU5 481 aa11.99□□□□□ -0.49
PHACTR1-210ENST00000489548 ERVV-1B6SEH8 477 aa11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 IPO8O15397 1037 aaKnown RBP11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 HTATSF1O43719 755 aaKnown RBP11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 HOXA10P31260 410 aaPredicted RBP11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 ECE1P42892 770 aa11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 GRIPAP1Q4V328 841 aa11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 CYP4F22Q6NT55 531 aa11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 USP50Q70EL3 339 aaPredicted RBP11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 LARGE2Q8N3Y3 721 aa11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 CHMP4BQ9H444 224 aaKnown RBP11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 MIS18AQ9NYP9 233 aa11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
PHACTR1-210ENST00000489548 COL4A5P29400 1685 aa11.97□□□□□ -0.49
PHACTR1-210ENST00000489548 ABCC12Q96J65 1359 aa11.97□□□□□ -0.49
PHACTR1-210ENST00000489548 TRAF5O00463 557 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms