RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 ST5P78524 1137 aa19.73■□□□□ 0.75
SMIM11A-206ENST00000489469 UBN2Q6ZU65 1347 aa19.73■□□□□ 0.75
SMIM11A-206ENST00000489469 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
SMIM11A-206ENST00000489469 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
SMIM11A-206ENST00000489469 ISCA1Q9BUE6 129 aa19.72■□□□□ 0.75
SMIM11A-206ENST00000489469 BCL2L13Q9BXK5 485 aa19.72■□□□□ 0.75
SMIM11A-206ENST00000489469 FHDC1Q9C0D6 1143 aaPredicted RBP19.72■□□□□ 0.75
SMIM11A-206ENST00000489469 ANKRD31Q8N7Z5 1873 aa19.71■□□□□ 0.75
SMIM11A-206ENST00000489469 GTF2E1P29083 439 aaPredicted RBP19.71■□□□□ 0.75
SMIM11A-206ENST00000489469 PRR5LQ6MZQ0 368 aa19.71■□□□□ 0.75
SMIM11A-206ENST00000489469 NLRP10Q86W26 655 aa19.71■□□□□ 0.75
SMIM11A-206ENST00000489469 MYD88Q99836 296 aa19.71■□□□□ 0.75
SMIM11A-206ENST00000489469 TGFB2P61812 414 aa19.7■□□□□ 0.74
SMIM11A-206ENST00000489469 CCDC191Q8NCU4 936 aa19.7■□□□□ 0.74
SMIM11A-206ENST00000489469 SYT17Q9BSW7 474 aa19.7■□□□□ 0.74
SMIM11A-206ENST00000489469 UTP14AQ9BVJ6 771 aaKnown RBP19.7■□□□□ 0.74
SMIM11A-206ENST00000489469 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
SMIM11A-206ENST00000489469 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
SMIM11A-206ENST00000489469 BRIP1Q9BX63 1249 aa19.69■□□□□ 0.74
SMIM11A-206ENST00000489469 N4BP2Q86UW6 1770 aaPredicted RBP19.69■□□□□ 0.74
SMIM11A-206ENST00000489469 SRCAPQ6ZRS2 3230 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 RIC1Q4ADV7 1423 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 PXDNLA1KZ92 1463 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 ATP5J2-PTCD1G3V325 749 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 IPO8O15397 1037 aaKnown RBP19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 NTSR2O95665 410 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 PDE6BP35913 854 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 LINS1Q8NG48 757 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 ARHGAP45Q92619 1136 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 API5Q9BZZ5 524 aaKnown RBP19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 CWC25Q9NXE8 425 aaPredicted RBP19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 KIAA1551Q9HCM1 1747 aa19.68■□□□□ 0.74
SMIM11A-206ENST00000489469 DLEC1Q9Y238 1755 aa19.67■□□□□ 0.74
SMIM11A-206ENST00000489469 TRMT112Q9UI30 125 aaKnown RBP19.67■□□□□ 0.74
SMIM11A-206ENST00000489469 SH3TC1Q8TE82 1336 aa19.67■□□□□ 0.74
SMIM11A-206ENST00000489469 LAMB2P55268 1798 aa19.67■□□□□ 0.74
SMIM11A-206ENST00000489469 HSP90B1P14625 803 aaKnown RBP19.66■□□□□ 0.74
SMIM11A-206ENST00000489469 NOB1Q9ULX3 412 aaKnown RBP19.66■□□□□ 0.74
SMIM11A-206ENST00000489469 BRCA1P38398 1863 aaKnown RBP19.66■□□□□ 0.74
SMIM11A-206ENST00000489469 NEURL1BA8MQ27 555 aa19.65■□□□□ 0.74
SMIM11A-206ENST00000489469 F6X3S4 739 aa19.65■□□□□ 0.74
SMIM11A-206ENST00000489469 MYH3P11055 1940 aa19.64■□□□□ 0.74
SMIM11A-206ENST00000489469 BCAR3O75815 825 aa19.64■□□□□ 0.73
SMIM11A-206ENST00000489469 ALDH1L1O75891 902 aa19.64■□□□□ 0.73
SMIM11A-206ENST00000489469 IGKV5-2P06315 115 aa19.64■□□□□ 0.73
SMIM11A-206ENST00000489469 ERFEQ4G0M1 354 aa19.64■□□□□ 0.73
SMIM11A-206ENST00000489469 SLC10A5Q5PT55 438 aa19.64■□□□□ 0.73
SMIM11A-206ENST00000489469 BEND3Q5T5X7 828 aa19.64■□□□□ 0.73
SMIM11A-206ENST00000489469 NUTM1Q86Y26 1132 aa19.64■□□□□ 0.73
SMIM11A-206ENST00000489469 ZBTB38Q8NAP3 1195 aaPredicted RBP19.64■□□□□ 0.73
SMIM11A-206ENST00000489469 DDX60Q8IY21 1712 aaKnown RBP19.63■□□□□ 0.73
SMIM11A-206ENST00000489469 H0YIN7 160 aa19.63■□□□□ 0.73
SMIM11A-206ENST00000489469 PCCAP05165 728 aaPredicted RBP19.63■□□□□ 0.73
SMIM11A-206ENST00000489469 SLC4A10Q6U841 1118 aa19.63■□□□□ 0.73
SMIM11A-206ENST00000489469 SRCIN1Q9C0H9 1055 aa19.63■□□□□ 0.73
SMIM11A-206ENST00000489469 RCAN3Q9UKA8 241 aa19.63■□□□□ 0.73
SMIM11A-206ENST00000489469 COL11A2P13942 1736 aaPredicted RBP19.62■□□□□ 0.73
SMIM11A-206ENST00000489469 ABCC12Q96J65 1359 aa19.62■□□□□ 0.73
SMIM11A-206ENST00000489469 CWF19L2Q2TBE0 894 aaKnown RBP19.62■□□□□ 0.73
SMIM11A-206ENST00000489469 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
SMIM11A-206ENST00000489469 NLGN2Q8NFZ4 835 aa19.62■□□□□ 0.73
SMIM11A-206ENST00000489469 TNRC6CQ9HCJ0 1690 aaKnown RBP19.62■□□□□ 0.73
SMIM11A-206ENST00000489469 KLRG2A4D1S0 409 aaPredicted RBP19.61■□□□□ 0.73
SMIM11A-206ENST00000489469 GCKRQ14397 625 aa19.61■□□□□ 0.73
SMIM11A-206ENST00000489469 C2CD5Q86YS7 1000 aa19.61■□□□□ 0.73
SMIM11A-206ENST00000489469 CCDC24Q8N4L8 307 aa19.61■□□□□ 0.73
SMIM11A-206ENST00000489469 FRAT1Q92837 279 aaPredicted RBP19.61■□□□□ 0.73
SMIM11A-206ENST00000489469 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
SMIM11A-206ENST00000489469 CDHR2Q9BYE9 1310 aa19.6■□□□□ 0.73
SMIM11A-206ENST00000489469 DPEP1P16444 411 aa19.6■□□□□ 0.73
SMIM11A-206ENST00000489469 CCT4P50991 539 aaKnown RBP19.6■□□□□ 0.73
SMIM11A-206ENST00000489469 ATF7IPQ6VMQ6 1270 aa19.6■□□□□ 0.73
SMIM11A-206ENST00000489469 FAM89AQ96GI7 184 aa19.6■□□□□ 0.73
SMIM11A-206ENST00000489469 ARFGEF1Q9Y6D6 1849 aa19.6■□□□□ 0.73
SMIM11A-206ENST00000489469 A0A0G2JLW4 131 aa19.59■□□□□ 0.73
SMIM11A-206ENST00000489469 PIM2Q9P1W9 311 aa19.59■□□□□ 0.73
SMIM11A-206ENST00000489469 CACNA1SQ13698 1873 aa19.58■□□□□ 0.73
SMIM11A-206ENST00000489469 ABCC4O15439 1325 aa19.58■□□□□ 0.73
SMIM11A-206ENST00000489469 H7C1W4 665 aa19.58■□□□□ 0.72
SMIM11A-206ENST00000489469 IRS4O14654 1257 aaPredicted RBP19.58■□□□□ 0.72
SMIM11A-206ENST00000489469 SRGNP10124 158 aa19.58■□□□□ 0.72
SMIM11A-206ENST00000489469 NPR1P16066 1061 aa19.58■□□□□ 0.72
SMIM11A-206ENST00000489469 CRY2Q49AN0 593 aa19.58■□□□□ 0.72
SMIM11A-206ENST00000489469 STYK1Q6J9G0 422 aa19.58■□□□□ 0.72
SMIM11A-206ENST00000489469 MASTLQ96GX5 879 aa19.58■□□□□ 0.72
SMIM11A-206ENST00000489469 MS4A1P11836 297 aa19.57■□□□□ 0.72
SMIM11A-206ENST00000489469 TRIM27P14373 513 aa19.57■□□□□ 0.72
SMIM11A-206ENST00000489469 CHRNA5P30532 468 aa19.57■□□□□ 0.72
SMIM11A-206ENST00000489469 CNKSR1Q969H4 720 aa19.57■□□□□ 0.72
SMIM11A-206ENST00000489469 C9orf78Q9NZ63 289 aaPredicted RBP19.57■□□□□ 0.72
SMIM11A-206ENST00000489469 GRM8O00222 908 aa19.56■□□□□ 0.72
SMIM11A-206ENST00000489469 PDE8AO60658 829 aa19.56■□□□□ 0.72
SMIM11A-206ENST00000489469 HCLS1P14317 486 aaPredicted RBP19.56■□□□□ 0.72
SMIM11A-206ENST00000489469 KCNA3P22001 575 aa19.56■□□□□ 0.72
SMIM11A-206ENST00000489469 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
SMIM11A-206ENST00000489469 UBE3BQ7Z3V4 1068 aa19.56■□□□□ 0.72
SMIM11A-206ENST00000489469 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.56■□□□□ 0.72
SMIM11A-206ENST00000489469 RPGRQ92834 1020 aaKnown RBP19.56■□□□□ 0.72
SMIM11A-206ENST00000489469 SYNE4Q8N205 404 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms