RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 MASTLQ96GX5 879 aa20.22■□□□□ 0.83
LMX1A-204ENST00000489443 ZNF219Q9P2Y4 722 aaPredicted RBP20.22■□□□□ 0.83
LMX1A-204ENST00000489443 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
LMX1A-204ENST00000489443 KLRG2A4D1S0 409 aaPredicted RBP20.21■□□□□ 0.83
LMX1A-204ENST00000489443 E9PSI1 815 aa20.21■□□□□ 0.83
LMX1A-204ENST00000489443 STYK1Q6J9G0 422 aa20.21■□□□□ 0.83
LMX1A-204ENST00000489443 G2E3Q7L622 706 aa20.21■□□□□ 0.83
LMX1A-204ENST00000489443 TRMT112Q9UI30 125 aaKnown RBP20.21■□□□□ 0.83
LMX1A-204ENST00000489443 NPR1P16066 1061 aa20.2■□□□□ 0.82
LMX1A-204ENST00000489443 CNKSR1Q969H4 720 aa20.2■□□□□ 0.82
LMX1A-204ENST00000489443 ISCA1Q9BUE6 129 aa20.2■□□□□ 0.82
LMX1A-204ENST00000489443 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
LMX1A-204ENST00000489443 SLFN5Q08AF3 891 aa20.19■□□□□ 0.82
LMX1A-204ENST00000489443 SYNE4Q8N205 404 aa20.19■□□□□ 0.82
LMX1A-204ENST00000489443 CDCA7LQ96GN5 454 aa20.19■□□□□ 0.82
LMX1A-204ENST00000489443 MYD88Q99836 296 aa20.19■□□□□ 0.82
LMX1A-204ENST00000489443 CACNA1FO60840 1977 aa20.19■□□□□ 0.82
LMX1A-204ENST00000489443 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
LMX1A-204ENST00000489443 PI4KAP2A4QPH2 592 aa20.18■□□□□ 0.82
LMX1A-204ENST00000489443 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
LMX1A-204ENST00000489443 PI4KAP1Q8N8J0 262 aa20.18■□□□□ 0.82
LMX1A-204ENST00000489443 MAP3K2Q9Y2U5 619 aa20.18■□□□□ 0.82
LMX1A-204ENST00000489443 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
LMX1A-204ENST00000489443 C21orf2O43822 256 aa20.17■□□□□ 0.82
LMX1A-204ENST00000489443 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
LMX1A-204ENST00000489443 SLC10A5Q5PT55 438 aa20.17■□□□□ 0.82
LMX1A-204ENST00000489443 KSR2Q6VAB6 950 aa20.17■□□□□ 0.82
LMX1A-204ENST00000489443 RPGRQ92834 1020 aaKnown RBP20.17■□□□□ 0.82
LMX1A-204ENST00000489443 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
LMX1A-204ENST00000489443 RNF123Q5XPI4 1314 aa20.17■□□□□ 0.82
LMX1A-204ENST00000489443 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
LMX1A-204ENST00000489443 FLIIQ13045 1269 aa20.16■□□□□ 0.82
LMX1A-204ENST00000489443 TRIM28Q13263 835 aaKnown RBP20.16■□□□□ 0.82
LMX1A-204ENST00000489443 C3orf67Q6ZVT6 689 aa20.16■□□□□ 0.82
LMX1A-204ENST00000489443 METTL22Q9BUU2 404 aaPredicted RBP20.16■□□□□ 0.82
LMX1A-204ENST00000489443 ALDH1B1P30837 517 aa20.15■□□□□ 0.82
LMX1A-204ENST00000489443 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
LMX1A-204ENST00000489443 CRY2Q49AN0 593 aa20.15■□□□□ 0.82
LMX1A-204ENST00000489443 RTL5Q5HYW3 569 aaPredicted RBP20.15■□□□□ 0.82
LMX1A-204ENST00000489443 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
LMX1A-204ENST00000489443 RIC1Q4ADV7 1423 aa20.15■□□□□ 0.82
LMX1A-204ENST00000489443 ADCY9O60503 1353 aa20.14■□□□□ 0.81
LMX1A-204ENST00000489443 ZNF784Q8NCA9 323 aaPredicted RBP20.14■□□□□ 0.81
LMX1A-204ENST00000489443 HNRNPUQ00839 825 aaKnown RBP eCLIP20.13■□□□□ 0.81
LMX1A-204ENST00000489443 NEXNQ0ZGT2 675 aa20.13■□□□□ 0.81
LMX1A-204ENST00000489443 CCDC191Q8NCU4 936 aa20.13■□□□□ 0.81
LMX1A-204ENST00000489443 RBM17Q96I25 401 aaKnown RBP20.13■□□□□ 0.81
LMX1A-204ENST00000489443 HOXA10P31260 410 aaPredicted RBP20.12■□□□□ 0.81
LMX1A-204ENST00000489443 RASSF7Q02833 373 aa20.12■□□□□ 0.81
LMX1A-204ENST00000489443 C9orf131Q5VYM1 1079 aa20.12■□□□□ 0.81
LMX1A-204ENST00000489443 CWC25Q9NXE8 425 aaPredicted RBP20.12■□□□□ 0.81
LMX1A-204ENST00000489443 TRMT2AQ8IZ69 625 aaKnown RBP20.11■□□□□ 0.81
LMX1A-204ENST00000489443 JARID2Q92833 1246 aaPredicted RBP20.11■□□□□ 0.81
LMX1A-204ENST00000489443 SBF1O95248 1867 aa20.11■□□□□ 0.81
LMX1A-204ENST00000489443 LAMB2P55268 1798 aa20.11■□□□□ 0.81
LMX1A-204ENST00000489443 NFKBIEO00221 500 aa20.1■□□□□ 0.81
LMX1A-204ENST00000489443 IRS4O14654 1257 aaPredicted RBP20.1■□□□□ 0.81
LMX1A-204ENST00000489443 IGKV5-2P06315 115 aa20.1■□□□□ 0.81
LMX1A-204ENST00000489443 SOGA3Q5TF21 947 aa20.1■□□□□ 0.81
LMX1A-204ENST00000489443 ZBTB38Q8NAP3 1195 aaPredicted RBP20.1■□□□□ 0.81
LMX1A-204ENST00000489443 C7orf43Q8WVR3 580 aa20.1■□□□□ 0.81
LMX1A-204ENST00000489443 DNAAF4Q8WXU2 420 aa20.1■□□□□ 0.81
LMX1A-204ENST00000489443 CRAMP1Q96RY5 1269 aa20.1■□□□□ 0.81
LMX1A-204ENST00000489443 RNF181Q9P0P0 153 aa20.1■□□□□ 0.81
LMX1A-204ENST00000489443 CCDC88AQ3V6T2 1871 aa20.09■□□□□ 0.81
LMX1A-204ENST00000489443 CWF19L2Q2TBE0 894 aaKnown RBP20.09■□□□□ 0.81
LMX1A-204ENST00000489443 OLFM4Q6UX06 510 aa20.09■□□□□ 0.81
LMX1A-204ENST00000489443 DDX60Q8IY21 1712 aaKnown RBP20.09■□□□□ 0.81
LMX1A-204ENST00000489443 FER1L6Q2WGJ9 1857 aa20.08■□□□□ 0.81
LMX1A-204ENST00000489443 PCCAP05165 728 aaPredicted RBP20.08■□□□□ 0.81
LMX1A-204ENST00000489443 CCDC93Q567U6 631 aa20.08■□□□□ 0.81
LMX1A-204ENST00000489443 NEURL1BA8MQ27 555 aa20.07■□□□□ 0.8
LMX1A-204ENST00000489443 F6X3S4 739 aa20.07■□□□□ 0.8
LMX1A-204ENST00000489443 LMNB1P20700 586 aa20.07■□□□□ 0.8
LMX1A-204ENST00000489443 DDX46Q7L014 1031 aaKnown RBP20.07■□□□□ 0.8
LMX1A-204ENST00000489443 ZNF526Q8TF50 670 aaPredicted RBP20.07■□□□□ 0.8
LMX1A-204ENST00000489443 PRELPP51888 382 aa20.06■□□□□ 0.8
LMX1A-204ENST00000489443 MRPL50Q8N5N7 158 aaKnown RBP20.06■□□□□ 0.8
LMX1A-204ENST00000489443 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
LMX1A-204ENST00000489443 TAOK3Q9H2K8 898 aa20.06■□□□□ 0.8
LMX1A-204ENST00000489443 ABCC4O15439 1325 aa20.05■□□□□ 0.8
LMX1A-204ENST00000489443 TAF1P21675 1872 aa20.05■□□□□ 0.8
LMX1A-204ENST00000489443 PPEF1O14829 653 aaPredicted RBP20.05■□□□□ 0.8
LMX1A-204ENST00000489443 HSP90B1P14625 803 aaKnown RBP20.05■□□□□ 0.8
LMX1A-204ENST00000489443 LINS1Q8NG48 757 aa20.05■□□□□ 0.8
LMX1A-204ENST00000489443 BCL2L13Q9BXK5 485 aa20.05■□□□□ 0.8
LMX1A-204ENST00000489443 SF3B3Q15393 1217 aaKnown RBP20.04■□□□□ 0.8
LMX1A-204ENST00000489443 RTKN2Q8IZC4 609 aa20.04■□□□□ 0.8
LMX1A-204ENST00000489443 GCKRQ14397 625 aa20.03■□□□□ 0.8
LMX1A-204ENST00000489443 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
LMX1A-204ENST00000489443 SLC51AQ86UW1 340 aa20.03■□□□□ 0.8
LMX1A-204ENST00000489443 TMX4Q9H1E5 349 aaPredicted RBP20.03■□□□□ 0.8
LMX1A-204ENST00000489443 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.8
LMX1A-204ENST00000489443 PDE8AO60658 829 aa20.02■□□□□ 0.8
LMX1A-204ENST00000489443 BBOX1O75936 387 aa20.02■□□□□ 0.8
LMX1A-204ENST00000489443 GRAPQ13588 217 aa20.02■□□□□ 0.8
LMX1A-204ENST00000489443 ALDH1L2Q3SY69 923 aa20.02■□□□□ 0.8
LMX1A-204ENST00000489443 CC2D2BQ6DHV5 1058 aa20.02■□□□□ 0.8
LMX1A-204ENST00000489443 UBE3BQ7Z3V4 1068 aa20.02■□□□□ 0.8
LMX1A-204ENST00000489443 GRAPLQ8TC17 118 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms