RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 FCF1Q9Y324 198 aaKnown RBP9.52□□□□□ -0.89
SCMH1-216ENST00000489421 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
SCMH1-216ENST00000489421 CFAP53Q96M91 514 aa9.51□□□□□ -0.89
SCMH1-216ENST00000489421 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
SCMH1-216ENST00000489421 LY75O60449 1722 aa9.51□□□□□ -0.89
SCMH1-216ENST00000489421 TOGARAM1Q9Y4F4 1720 aa9.51□□□□□ -0.89
SCMH1-216ENST00000489421 USP46P62068 366 aa9.5□□□□□ -0.89
SCMH1-216ENST00000489421 HNRNPUQ00839 825 aaKnown RBP eCLIP9.5□□□□□ -0.89
SCMH1-216ENST00000489421 GUCA2AQ02747 115 aa9.5□□□□□ -0.89
SCMH1-216ENST00000489421 AMHR2Q16671 573 aa9.5□□□□□ -0.89
SCMH1-216ENST00000489421 ZNF697Q5TEC3 545 aa9.5□□□□□ -0.89
SCMH1-216ENST00000489421 USP35Q9P2H5 1018 aa9.5□□□□□ -0.89
SCMH1-216ENST00000489421 TAF1LQ8IZX4 1826 aa9.49□□□□□ -0.89
SCMH1-216ENST00000489421 SMG6Q86US8 1419 aaKnown RBP9.49□□□□□ -0.89
SCMH1-216ENST00000489421 PKD1L3Q7Z443 1732 aa9.49□□□□□ -0.89
SCMH1-216ENST00000489421 FBLN1P23142 703 aa9.49□□□□□ -0.89
SCMH1-216ENST00000489421 WDR43Q15061 677 aaKnown RBP eCLIP9.49□□□□□ -0.89
SCMH1-216ENST00000489421 Q3C1V9 767 aa9.49□□□□□ -0.89
SCMH1-216ENST00000489421 ARHGEF25Q86VW2 580 aa9.49□□□□□ -0.89
SCMH1-216ENST00000489421 PAPPAQ13219 1627 aa9.49□□□□□ -0.89
SCMH1-216ENST00000489421 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
SCMH1-216ENST00000489421 SSTR3P32745 418 aaPredicted RBP9.48□□□□□ -0.89
SCMH1-216ENST00000489421 ZBED9Q6R2W3 1325 aa9.48□□□□□ -0.89
SCMH1-216ENST00000489421 ZBTB7CA1YPR0 619 aa9.47□□□□□ -0.89
SCMH1-216ENST00000489421 TTLL12Q14166 644 aaPredicted RBP9.47□□□□□ -0.89
SCMH1-216ENST00000489421 GIGYF2Q6Y7W6 1299 aaKnown RBP9.47□□□□□ -0.89
SCMH1-216ENST00000489421 CCDC125Q86Z20 511 aa9.47□□□□□ -0.89
SCMH1-216ENST00000489421 EMILIN1Q9Y6C2 1016 aa9.47□□□□□ -0.89
SCMH1-216ENST00000489421 WDR17Q8IZU2 1322 aa9.47□□□□□ -0.89
SCMH1-216ENST00000489421 COL3A1P02461 1466 aaPredicted RBP9.47□□□□□ -0.89
SCMH1-216ENST00000489421 COL24A1Q17RW2 1714 aa9.46□□□□□ -0.89
SCMH1-216ENST00000489421 GDF9O60383 454 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 DIAPH1O60610 1272 aaKnown RBP9.46□□□□□ -0.9
SCMH1-216ENST00000489421 IL13P35225 146 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 PRR20EP86478 221 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 PRR20CP86479 221 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 PRR20DP86480 221 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 PRR20BP86481 221 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 PRR20AP86496 221 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 RRS1Q15050 365 aaKnown RBP9.46□□□□□ -0.9
SCMH1-216ENST00000489421 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 TCP11L2Q8N4U5 519 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 USB1Q9BQ65 265 aaKnown RBP9.46□□□□□ -0.9
SCMH1-216ENST00000489421 NUDCQ9Y266 331 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 TNS2Q63HR2 1409 aa9.46□□□□□ -0.9
SCMH1-216ENST00000489421 TNFRSF10AO00220 468 aa9.45□□□□□ -0.9
SCMH1-216ENST00000489421 TRIM66O15016 1216 aa9.45□□□□□ -0.9
SCMH1-216ENST00000489421 MMP16P51512 607 aa9.45□□□□□ -0.9
SCMH1-216ENST00000489421 PTF1AQ7RTS3 328 aa9.45□□□□□ -0.9
SCMH1-216ENST00000489421 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
SCMH1-216ENST00000489421 MAP3K19Q56UN5 1328 aa9.45□□□□□ -0.9
SCMH1-216ENST00000489421 KIF24Q5T7B8 1368 aa9.45□□□□□ -0.9
SCMH1-216ENST00000489421 TRIM37O94972 964 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 RPIAP49247 311 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 EVA1CP58658 441 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 EZH2Q15910 746 aaKnown RBP9.44□□□□□ -0.9
SCMH1-216ENST00000489421 NUTM1Q86Y26 1132 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 PARP9Q8IXQ6 854 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 KCNH5Q8NCM2 988 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 PKD2L1Q9P0L9 805 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 OVOS2A0A0G2JMS6 1433 aa9.44□□□□□ -0.9
SCMH1-216ENST00000489421 PPM1GO15355 546 aaPredicted RBP9.43□□□□□ -0.9
SCMH1-216ENST00000489421 DXOO77932 396 aaKnown RBP9.43□□□□□ -0.9
SCMH1-216ENST00000489421 U2AF1L5P0DN76 240 aaPredicted RBP9.43□□□□□ -0.9
SCMH1-216ENST00000489421 U2AF1Q01081 240 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCMH1-216ENST00000489421 SPIRE2Q8WWL2 714 aa9.43□□□□□ -0.9
SCMH1-216ENST00000489421 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
SCMH1-216ENST00000489421 PCDHGC3Q9UN70 934 aa9.43□□□□□ -0.9
SCMH1-216ENST00000489421 THRAP3Q9Y2W1 955 aaKnown RBP9.43□□□□□ -0.9
SCMH1-216ENST00000489421 C5P01031 1676 aa9.42□□□□□ -0.9
SCMH1-216ENST00000489421 MEGF6O75095 1541 aa9.42□□□□□ -0.9
SCMH1-216ENST00000489421 HSP90AB2PQ58FF8 381 aa9.42□□□□□ -0.9
SCMH1-216ENST00000489421 TOM1L2Q6ZVM7 507 aa9.42□□□□□ -0.9
SCMH1-216ENST00000489421 CAMKK2Q96RR4 588 aa9.42□□□□□ -0.9
SCMH1-216ENST00000489421 PLEKHF1Q96S99 279 aa9.42□□□□□ -0.9
SCMH1-216ENST00000489421 BCL9O00512 1426 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 FLT4P35916 1363 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 ZNF521Q96K83 1311 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 APAF1O14727 1248 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
SCMH1-216ENST00000489421 PDE3BQ13370 1112 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
SCMH1-216ENST00000489421 FAM196AQ6ZSG2 479 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 CCDC146Q8IYE0 955 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
SCMH1-216ENST00000489421 IP6K1Q92551 441 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 AK7Q96M32 723 aa9.41□□□□□ -0.9
SCMH1-216ENST00000489421 PNNQ9H307 717 aaKnown RBP9.41□□□□□ -0.9
SCMH1-216ENST00000489421 RTL1A6NKG5 1358 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 FDX1P10109 184 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 MS4A1P11836 297 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 NDUFV2P19404 249 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 HOXC9P31274 260 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 BAG6P46379 1132 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 AMPHP49418 695 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 FOXC1Q12948 553 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 CARD10Q9BWT7 1032 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
SCMH1-216ENST00000489421 UBR3Q6ZT12 1888 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms