RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 NUP98P52948 1817 aa22.34■■□□□ 1.17
CD40-206ENST00000489304 TRIM28Q13263 835 aaKnown RBP22.34■■□□□ 1.17
CD40-206ENST00000489304 HSP90AB4PQ58FF6 505 aa22.34■■□□□ 1.17
CD40-206ENST00000489304 RC3H1Q5TC82 1133 aaKnown RBP22.34■■□□□ 1.17
CD40-206ENST00000489304 AMIGO3Q86WK7 504 aa22.34■■□□□ 1.17
CD40-206ENST00000489304 SURF6O75683 361 aaKnown RBP22.33■■□□□ 1.17
CD40-206ENST00000489304 GNPATO15228 680 aa22.31■■□□□ 1.16
CD40-206ENST00000489304 RPS6KA4O75676 772 aa22.31■■□□□ 1.16
CD40-206ENST00000489304 NLRP10Q86W26 655 aa22.31■■□□□ 1.16
CD40-206ENST00000489304 PROM2Q8N271 834 aa22.31■■□□□ 1.16
CD40-206ENST00000489304 OTUD7AQ8TE49 926 aaPredicted RBP22.31■■□□□ 1.16
CD40-206ENST00000489304 BCL11AQ9H165 835 aa22.31■■□□□ 1.16
CD40-206ENST00000489304 SALL3Q9BXA9 1300 aa22.3■■□□□ 1.16
CD40-206ENST00000489304 RABL6Q3YEC7 729 aaPredicted RBP22.3■■□□□ 1.16
CD40-206ENST00000489304 HSP90AB3PQ58FF7 597 aa22.3■■□□□ 1.16
CD40-206ENST00000489304 ZNF34Q8IZ26 560 aa22.3■■□□□ 1.16
CD40-206ENST00000489304 OSBPL3Q9H4L5 887 aa22.3■■□□□ 1.16
CD40-206ENST00000489304 UBN2Q6ZU65 1347 aa22.3■■□□□ 1.16
CD40-206ENST00000489304 SYNE4Q8N205 404 aa22.29■■□□□ 1.16
CD40-206ENST00000489304 KIF1BPQ96EK5 621 aa22.29■■□□□ 1.16
CD40-206ENST00000489304 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
CD40-206ENST00000489304 FOXO4P98177 505 aa22.28■■□□□ 1.16
CD40-206ENST00000489304 TTC22Q5TAA0 569 aa22.28■■□□□ 1.16
CD40-206ENST00000489304 RHPN1Q8TCX5 695 aa22.28■■□□□ 1.16
CD40-206ENST00000489304 PA2G4Q9UQ80 394 aaKnown RBP22.28■■□□□ 1.16
CD40-206ENST00000489304 TUBGCP6Q96RT7 1819 aa22.28■■□□□ 1.16
CD40-206ENST00000489304 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
CD40-206ENST00000489304 APBA3O96018 575 aa22.28■■□□□ 1.16
CD40-206ENST00000489304 FAM89AQ96GI7 184 aa22.28■■□□□ 1.16
CD40-206ENST00000489304 SRP68Q9UHB9 627 aaKnown RBP22.28■■□□□ 1.16
CD40-206ENST00000489304 PCCAP05165 728 aaPredicted RBP22.27■■□□□ 1.16
CD40-206ENST00000489304 TXNRD1Q16881 649 aa22.27■■□□□ 1.16
CD40-206ENST00000489304 SEC24BO95487 1268 aa22.26■■□□□ 1.15
CD40-206ENST00000489304 ANP32AP39687 249 aaKnown RBP22.26■■□□□ 1.15
CD40-206ENST00000489304 PDE1AP54750 535 aa22.26■■□□□ 1.15
CD40-206ENST00000489304 ERC1Q8IUD2 1116 aa22.26■■□□□ 1.15
CD40-206ENST00000489304 BCL2L12Q9HB09 334 aa22.26■■□□□ 1.15
CD40-206ENST00000489304 RTCBQ9Y3I0 505 aaKnown RBP22.26■■□□□ 1.15
CD40-206ENST00000489304 GSPT1P15170 499 aaKnown RBP22.26■■□□□ 1.15
CD40-206ENST00000489304 SLC27A3Q5K4L6 730 aa22.26■■□□□ 1.15
CD40-206ENST00000489304 AK7Q96M32 723 aa22.26■■□□□ 1.15
CD40-206ENST00000489304 STAP2Q9UGK3 403 aa22.26■■□□□ 1.15
CD40-206ENST00000489304 FAM177BA6PVY3 158 aa22.25■■□□□ 1.15
CD40-206ENST00000489304 PHF14O94880 888 aa22.25■■□□□ 1.15
CD40-206ENST00000489304 SUSD4Q5VX71 490 aa22.25■■□□□ 1.15
CD40-206ENST00000489304 LMBR1LQ6UX01 489 aa22.25■■□□□ 1.15
CD40-206ENST00000489304 ZBTB38Q8NAP3 1195 aaPredicted RBP22.25■■□□□ 1.15
CD40-206ENST00000489304 ARHGEF1Q92888 912 aaKnown RBP22.25■■□□□ 1.15
CD40-206ENST00000489304 USPL1Q5W0Q7 1092 aa22.24■■□□□ 1.15
CD40-206ENST00000489304 KLHDC4Q8TBB5 520 aa22.24■■□□□ 1.15
CD40-206ENST00000489304 MX1P20591 662 aa22.23■■□□□ 1.15
CD40-206ENST00000489304 RFX5P48382 616 aaPredicted RBP22.23■■□□□ 1.15
CD40-206ENST00000489304 OS9Q13438 667 aaPredicted RBP22.23■■□□□ 1.15
CD40-206ENST00000489304 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
CD40-206ENST00000489304 COPRSQ9NQ92 184 aa22.23■■□□□ 1.15
CD40-206ENST00000489304 TRMT112Q9UI30 125 aaKnown RBP22.23■■□□□ 1.15
CD40-206ENST00000489304 BCORQ6W2J9 1755 aa22.23■■□□□ 1.15
CD40-206ENST00000489304 AOX1Q06278 1338 aa22.23■■□□□ 1.15
CD40-206ENST00000489304 PLSCR1O15162 318 aa22.23■■□□□ 1.15
CD40-206ENST00000489304 NARFQ9UHQ1 456 aa22.23■■□□□ 1.15
CD40-206ENST00000489304 NIP7Q9Y221 180 aaKnown RBP eCLIP22.23■■□□□ 1.15
CD40-206ENST00000489304 G3BP1Q13283 466 aaKnown RBP eCLIP22.22■■□□□ 1.15
CD40-206ENST00000489304 ILDR1Q86SU0 546 aaPredicted RBP22.22■■□□□ 1.15
CD40-206ENST00000489304 EP400Q96L91 3159 aa22.22■■□□□ 1.15
CD40-206ENST00000489304 MYH3P11055 1940 aa22.21■■□□□ 1.15
CD40-206ENST00000489304 TBC1D9BQ66K14 1250 aa22.2■■□□□ 1.14
CD40-206ENST00000489304 PLA2G12BQ9BX93 195 aa22.2■■□□□ 1.14
CD40-206ENST00000489304 CHMP3Q9Y3E7 222 aa22.2■■□□□ 1.14
CD40-206ENST00000489304 CDHR2Q9BYE9 1310 aa22.2■■□□□ 1.14
CD40-206ENST00000489304 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
CD40-206ENST00000489304 PTPN12Q05209 780 aaKnown RBP22.2■■□□□ 1.14
CD40-206ENST00000489304 TRAPPC3LQ5T215 181 aa22.2■■□□□ 1.14
CD40-206ENST00000489304 CLEC4GQ6UXB4 293 aa22.2■■□□□ 1.14
CD40-206ENST00000489304 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
CD40-206ENST00000489304 ZNF652Q9Y2D9 606 aa22.2■■□□□ 1.14
CD40-206ENST00000489304 CDC45O75419 566 aa22.19■■□□□ 1.14
CD40-206ENST00000489304 SASH1O94885 1247 aa22.19■■□□□ 1.14
CD40-206ENST00000489304 CCDC85AQ96PX6 553 aaPredicted RBP22.19■■□□□ 1.14
CD40-206ENST00000489304 SIL1Q9H173 461 aa22.19■■□□□ 1.14
CD40-206ENST00000489304 UPF2Q9HAU5 1272 aaKnown RBP22.19■■□□□ 1.14
CD40-206ENST00000489304 SCN7AQ01118 1682 aa22.18■■□□□ 1.14
CD40-206ENST00000489304 USP42Q9H9J4 1324 aaKnown RBP22.18■■□□□ 1.14
CD40-206ENST00000489304 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.18■■□□□ 1.14
CD40-206ENST00000489304 IRS4O14654 1257 aaPredicted RBP22.18■■□□□ 1.14
CD40-206ENST00000489304 ZPR1O75312 459 aa22.18■■□□□ 1.14
CD40-206ENST00000489304 SDSP20132 328 aa22.18■■□□□ 1.14
CD40-206ENST00000489304 PARP10Q53GL7 1025 aa22.18■■□□□ 1.14
CD40-206ENST00000489304 CLASRPQ8N2M8 674 aaKnown RBP22.18■■□□□ 1.14
CD40-206ENST00000489304 UTP14AQ9BVJ6 771 aaKnown RBP22.18■■□□□ 1.14
CD40-206ENST00000489304 NTSR2O95665 410 aa22.17■■□□□ 1.14
CD40-206ENST00000489304 ZNF827Q17R98 1081 aa22.17■■□□□ 1.14
CD40-206ENST00000489304 TBC1D9Q6ZT07 1266 aa22.17■■□□□ 1.14
CD40-206ENST00000489304 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
CD40-206ENST00000489304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.17■■□□□ 1.14
CD40-206ENST00000489304 RFC4P35249 363 aa22.17■■□□□ 1.14
CD40-206ENST00000489304 HCLS1P14317 486 aaPredicted RBP22.16■■□□□ 1.14
CD40-206ENST00000489304 ZNF594Q96JF6 807 aaPredicted RBP22.16■■□□□ 1.14
CD40-206ENST00000489304 AK9Q5TCS8 1911 aa22.16■■□□□ 1.14
CD40-206ENST00000489304 C4AP0C0L4 1744 aa22.15■■□□□ 1.14
CD40-206ENST00000489304 RGL2O15211 777 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms