RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 HSP90AB3PQ58FF7 597 aa17.47■□□□□ 0.39
LMO4-203ENST00000489303 WWC1Q8IX03 1113 aa17.47■□□□□ 0.39
LMO4-203ENST00000489303 SMC1BQ8NDV3 1235 aa17.47■□□□□ 0.39
LMO4-203ENST00000489303 XAGE3Q8WTP9 111 aa17.47■□□□□ 0.39
LMO4-203ENST00000489303 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
LMO4-203ENST00000489303 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
LMO4-203ENST00000489303 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
LMO4-203ENST00000489303 GPTP24298 496 aa17.46■□□□□ 0.39
LMO4-203ENST00000489303 PARP10Q53GL7 1025 aa17.46■□□□□ 0.39
LMO4-203ENST00000489303 LRP10Q7Z4F1 713 aa17.46■□□□□ 0.39
LMO4-203ENST00000489303 PPP1R42Q7Z4L9 355 aa17.46■□□□□ 0.39
LMO4-203ENST00000489303 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.39
LMO4-203ENST00000489303 KLRG1Q96E93 195 aa17.46■□□□□ 0.39
LMO4-203ENST00000489303 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
LMO4-203ENST00000489303 ABCC12Q96J65 1359 aa17.45■□□□□ 0.38
LMO4-203ENST00000489303 KLRG2A4D1S0 409 aaPredicted RBP17.45■□□□□ 0.38
LMO4-203ENST00000489303 ELL2O00472 640 aaPredicted RBP17.45■□□□□ 0.38
LMO4-203ENST00000489303 ZNF34Q8IZ26 560 aa17.45■□□□□ 0.38
LMO4-203ENST00000489303 IL16Q14005 1332 aa17.45■□□□□ 0.38
LMO4-203ENST00000489303 LTBP3Q9NS15 1303 aa17.45■□□□□ 0.38
LMO4-203ENST00000489303 NUP98P52948 1817 aa17.44■□□□□ 0.38
LMO4-203ENST00000489303 SALL2Q9Y467 1007 aaPredicted RBP17.44■□□□□ 0.38
LMO4-203ENST00000489303 IBTKQ9P2D0 1353 aaPredicted RBP17.43■□□□□ 0.38
LMO4-203ENST00000489303 NPR1P16066 1061 aa17.43■□□□□ 0.38
LMO4-203ENST00000489303 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
LMO4-203ENST00000489303 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
LMO4-203ENST00000489303 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
LMO4-203ENST00000489303 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
LMO4-203ENST00000489303 CCDC30Q5VVM6 783 aa17.42■□□□□ 0.38
LMO4-203ENST00000489303 SUSD4Q5VX71 490 aa17.42■□□□□ 0.38
LMO4-203ENST00000489303 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
LMO4-203ENST00000489303 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
LMO4-203ENST00000489303 UTP14AQ9BVJ6 771 aaKnown RBP17.42■□□□□ 0.38
LMO4-203ENST00000489303 ALDH1B1P30837 517 aa17.41■□□□□ 0.38
LMO4-203ENST00000489303 TCIRG1Q13488 830 aa17.41■□□□□ 0.38
LMO4-203ENST00000489303 C3orf67Q6ZVT6 689 aa17.41■□□□□ 0.38
LMO4-203ENST00000489303 JMYQ8N9B5 988 aa17.41■□□□□ 0.38
LMO4-203ENST00000489303 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
LMO4-203ENST00000489303 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
LMO4-203ENST00000489303 TSR2Q969E8 191 aaKnown RBP17.41■□□□□ 0.38
LMO4-203ENST00000489303 ZNF541Q9H0D2 1346 aa17.41■□□□□ 0.38
LMO4-203ENST00000489303 PCNTO95613 3336 aa17.41■□□□□ 0.38
LMO4-203ENST00000489303 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
LMO4-203ENST00000489303 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
LMO4-203ENST00000489303 RNF123Q5XPI4 1314 aa17.4■□□□□ 0.38
LMO4-203ENST00000489303 NTSR2O95665 410 aa17.39■□□□□ 0.37
LMO4-203ENST00000489303 RPGRQ92834 1020 aaKnown RBP17.39■□□□□ 0.37
LMO4-203ENST00000489303 STK31Q9BXU1 1019 aa17.39■□□□□ 0.37
LMO4-203ENST00000489303 COL4A5P29400 1685 aa17.39■□□□□ 0.37
LMO4-203ENST00000489303 SNED1Q8TER0 1413 aa17.38■□□□□ 0.37
LMO4-203ENST00000489303 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
LMO4-203ENST00000489303 FKBP4Q02790 459 aaKnown RBP eCLIP17.38■□□□□ 0.37
LMO4-203ENST00000489303 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
LMO4-203ENST00000489303 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
LMO4-203ENST00000489303 NLRP3Q96P20 1036 aa17.38■□□□□ 0.37
LMO4-203ENST00000489303 CRY2Q49AN0 593 aa17.37■□□□□ 0.37
LMO4-203ENST00000489303 COL13A1Q5TAT6 717 aaPredicted RBP17.37■□□□□ 0.37
LMO4-203ENST00000489303 NLRP10Q86W26 655 aa17.37■□□□□ 0.37
LMO4-203ENST00000489303 SYNE4Q8N205 404 aa17.37■□□□□ 0.37
LMO4-203ENST00000489303 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
LMO4-203ENST00000489303 TRMT112Q9UI30 125 aaKnown RBP17.37■□□□□ 0.37
LMO4-203ENST00000489303 TCERG1O14776 1098 aaKnown RBP17.36■□□□□ 0.37
LMO4-203ENST00000489303 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
LMO4-203ENST00000489303 RBM17Q96I25 401 aaKnown RBP17.36■□□□□ 0.37
LMO4-203ENST00000489303 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
LMO4-203ENST00000489303 RIC1Q4ADV7 1423 aa17.36■□□□□ 0.37
LMO4-203ENST00000489303 SLC10A5Q5PT55 438 aa17.35■□□□□ 0.37
LMO4-203ENST00000489303 CHADLQ6NUI6 762 aa17.35■□□□□ 0.37
LMO4-203ENST00000489303 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
LMO4-203ENST00000489303 SH3TC1Q8TE82 1336 aa17.35■□□□□ 0.37
LMO4-203ENST00000489303 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
LMO4-203ENST00000489303 CCER2I3L3R5 266 aa17.34■□□□□ 0.37
LMO4-203ENST00000489303 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
LMO4-203ENST00000489303 TMX4Q9H1E5 349 aaPredicted RBP17.34■□□□□ 0.37
LMO4-203ENST00000489303 TAF1DQ9H5J8 278 aaPredicted RBP17.34■□□□□ 0.37
LMO4-203ENST00000489303 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
LMO4-203ENST00000489303 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
LMO4-203ENST00000489303 RTKN2Q8IZC4 609 aa17.33■□□□□ 0.36
LMO4-203ENST00000489303 L3MBTL3Q96JM7 780 aaPredicted RBP17.33■□□□□ 0.36
LMO4-203ENST00000489303 ISCA1Q9BUE6 129 aa17.33■□□□□ 0.36
LMO4-203ENST00000489303 FZD9O00144 591 aa17.32■□□□□ 0.36
LMO4-203ENST00000489303 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
LMO4-203ENST00000489303 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
LMO4-203ENST00000489303 CC2D2BQ6DHV5 1058 aa17.32■□□□□ 0.36
LMO4-203ENST00000489303 CRAMP1Q96RY5 1269 aa17.32■□□□□ 0.36
LMO4-203ENST00000489303 MKRN1Q9UHC7 482 aaKnown RBP17.32■□□□□ 0.36
LMO4-203ENST00000489303 SCN4AP35499 1836 aa17.31■□□□□ 0.36
LMO4-203ENST00000489303 SLC4A2P04920 1241 aa17.31■□□□□ 0.36
LMO4-203ENST00000489303 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
LMO4-203ENST00000489303 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
LMO4-203ENST00000489303 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
LMO4-203ENST00000489303 MYD88Q99836 296 aa17.31■□□□□ 0.36
LMO4-203ENST00000489303 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
LMO4-203ENST00000489303 HSPA1AP0DMV8 641 aaKnown RBP17.3■□□□□ 0.36
LMO4-203ENST00000489303 HSPA1BP0DMV9 641 aaKnown RBP17.3■□□□□ 0.36
LMO4-203ENST00000489303 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
LMO4-203ENST00000489303 KSR2Q6VAB6 950 aa17.3■□□□□ 0.36
LMO4-203ENST00000489303 PASKQ96RG2 1323 aa17.29■□□□□ 0.36
LMO4-203ENST00000489303 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
LMO4-203ENST00000489303 ITGBL1O95965 494 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms