RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 STK31Q9BXU1 1019 aa30.92■■■□□ 2.54
PTPN18-213ENST00000489215 RNF181Q9P0P0 153 aa30.92■■■□□ 2.54
PTPN18-213ENST00000489215 ZC3H4Q9UPT8 1303 aaKnown RBP30.92■■■□□ 2.54
PTPN18-213ENST00000489215 DDX58O95786 925 aaKnown RBP30.91■■■□□ 2.54
PTPN18-213ENST00000489215 TWISTNBQ3B726 338 aaPredicted RBP30.91■■■□□ 2.54
PTPN18-213ENST00000489215 NLRP10Q86W26 655 aa30.91■■■□□ 2.54
PTPN18-213ENST00000489215 RPGRQ92834 1020 aaKnown RBP30.91■■■□□ 2.54
PTPN18-213ENST00000489215 CCER2I3L3R5 266 aa30.9■■■□□ 2.54
PTPN18-213ENST00000489215 RIC3Q7Z5B4 369 aa30.9■■■□□ 2.54
PTPN18-213ENST00000489215 SLX4Q8IY92 1834 aa30.89■■■□□ 2.54
PTPN18-213ENST00000489215 TSPYL6Q8N831 410 aa30.89■■■□□ 2.54
PTPN18-213ENST00000489215 MYH16Q9H6N6 1097 aa30.89■■■□□ 2.54
PTPN18-213ENST00000489215 ABCC12Q96J65 1359 aa30.89■■■□□ 2.54
PTPN18-213ENST00000489215 CACNA1SQ13698 1873 aa30.89■■■□□ 2.53
PTPN18-213ENST00000489215 HOXA10P31260 410 aaPredicted RBP30.88■■■□□ 2.53
PTPN18-213ENST00000489215 TRMT112Q9UI30 125 aaKnown RBP30.88■■■□□ 2.53
PTPN18-213ENST00000489215 LTBP3Q9NS15 1303 aa30.88■■■□□ 2.53
PTPN18-213ENST00000489215 TRIM28Q13263 835 aaKnown RBP30.87■■■□□ 2.53
PTPN18-213ENST00000489215 RBM17Q96I25 401 aaKnown RBP30.87■■■□□ 2.53
PTPN18-213ENST00000489215 ZNF219Q9P2Y4 722 aaPredicted RBP30.87■■■□□ 2.53
PTPN18-213ENST00000489215 SH3TC1Q8TE82 1336 aa30.87■■■□□ 2.53
PTPN18-213ENST00000489215 CCDC93Q567U6 631 aa30.86■■■□□ 2.53
PTPN18-213ENST00000489215 ISCA1Q9BUE6 129 aa30.86■■■□□ 2.53
PTPN18-213ENST00000489215 PHAXQ9H814 394 aaKnown RBP30.86■■■□□ 2.53
PTPN18-213ENST00000489215 FANCIQ9NVI1 1328 aa30.86■■■□□ 2.53
PTPN18-213ENST00000489215 FER1L6Q2WGJ9 1857 aa30.86■■■□□ 2.53
PTPN18-213ENST00000489215 NFKBIEO00221 500 aa30.85■■■□□ 2.53
PTPN18-213ENST00000489215 RASSF7Q02833 373 aa30.85■■■□□ 2.53
PTPN18-213ENST00000489215 GRIPAP1Q4V328 841 aa30.85■■■□□ 2.53
PTPN18-213ENST00000489215 CC2D2BQ6DHV5 1058 aa30.85■■■□□ 2.53
PTPN18-213ENST00000489215 RTKN2Q8IZC4 609 aa30.85■■■□□ 2.53
PTPN18-213ENST00000489215 ZNF526Q8TF50 670 aaPredicted RBP30.85■■■□□ 2.53
PTPN18-213ENST00000489215 C7orf43Q8WVR3 580 aa30.85■■■□□ 2.53
PTPN18-213ENST00000489215 CRAMP1Q96RY5 1269 aa30.85■■■□□ 2.53
PTPN18-213ENST00000489215 TAOK3Q9H2K8 898 aa30.85■■■□□ 2.53
PTPN18-213ENST00000489215 KDM2BQ8NHM5 1336 aa30.83■■■□□ 2.53
PTPN18-213ENST00000489215 HSP90B1P14625 803 aaKnown RBP30.83■■■□□ 2.53
PTPN18-213ENST00000489215 TNRC6CQ9HCJ0 1690 aaKnown RBP30.83■■■□□ 2.53
PTPN18-213ENST00000489215 CACNA1FO60840 1977 aa30.83■■■□□ 2.53
PTPN18-213ENST00000489215 CCDC88AQ3V6T2 1871 aa30.82■■■□□ 2.53
PTPN18-213ENST00000489215 TMX4Q9H1E5 349 aaPredicted RBP30.81■■■□□ 2.52
PTPN18-213ENST00000489215 ATP5J2-PTCD1G3V325 749 aa30.79■■■□□ 2.52
PTPN18-213ENST00000489215 SLC4A2P04920 1241 aa30.79■■■□□ 2.52
PTPN18-213ENST00000489215 C1QTNF8P60827 252 aa30.79■■■□□ 2.52
PTPN18-213ENST00000489215 CCDC191Q8NCU4 936 aa30.79■■■□□ 2.52
PTPN18-213ENST00000489215 VAMP4O75379 141 aa30.78■■■□□ 2.52
PTPN18-213ENST00000489215 EXOSC9Q06265 439 aaKnown RBP30.78■■■□□ 2.52
PTPN18-213ENST00000489215 KSR2Q6VAB6 950 aa30.78■■■□□ 2.52
PTPN18-213ENST00000489215 METTL22Q9BUU2 404 aaPredicted RBP30.78■■■□□ 2.52
PTPN18-213ENST00000489215 DICER1Q9UPY3 1922 aaKnown RBP30.77■■■□□ 2.52
PTPN18-213ENST00000489215 FKBP4Q02790 459 aaKnown RBP eCLIP30.77■■■□□ 2.52
PTPN18-213ENST00000489215 NEXNQ0ZGT2 675 aa30.76■■■□□ 2.51
PTPN18-213ENST00000489215 DPY19L2Q6NUT2 758 aa30.76■■■□□ 2.51
PTPN18-213ENST00000489215 MYD88Q99836 296 aa30.76■■■□□ 2.51
PTPN18-213ENST00000489215 ZNF521Q96K83 1311 aa30.75■■■□□ 2.51
PTPN18-213ENST00000489215 BBOX1O75936 387 aa30.75■■■□□ 2.51
PTPN18-213ENST00000489215 HCLS1P14317 486 aaPredicted RBP30.75■■■□□ 2.51
PTPN18-213ENST00000489215 DDX46Q7L014 1031 aaKnown RBP30.75■■■□□ 2.51
PTPN18-213ENST00000489215 ZBTB38Q8NAP3 1195 aaPredicted RBP30.75■■■□□ 2.51
PTPN18-213ENST00000489215 PRELPP51888 382 aa30.74■■■□□ 2.51
PTPN18-213ENST00000489215 FAM89AQ96GI7 184 aa30.74■■■□□ 2.51
PTPN18-213ENST00000489215 MAP3K2Q9Y2U5 619 aa30.74■■■□□ 2.51
PTPN18-213ENST00000489215 PI4KAP2A4QPH2 592 aa30.73■■■□□ 2.51
PTPN18-213ENST00000489215 PPEF1O14829 653 aaPredicted RBP30.73■■■□□ 2.51
PTPN18-213ENST00000489215 PI4KAP1Q8N8J0 262 aa30.73■■■□□ 2.51
PTPN18-213ENST00000489215 PSMD1Q99460 953 aa30.73■■■□□ 2.51
PTPN18-213ENST00000489215 CWC25Q9NXE8 425 aaPredicted RBP30.73■■■□□ 2.51
PTPN18-213ENST00000489215 GLTPD2A6NH11 291 aa30.72■■■□□ 2.51
PTPN18-213ENST00000489215 C3orf67Q6ZVT6 689 aa30.72■■■□□ 2.51
PTPN18-213ENST00000489215 TMC4Q7Z404 712 aa30.72■■■□□ 2.51
PTPN18-213ENST00000489215 SYNE4Q8N205 404 aa30.72■■■□□ 2.51
PTPN18-213ENST00000489215 SPINK5Q9NQ38 1064 aaPredicted RBP30.72■■■□□ 2.51
PTPN18-213ENST00000489215 TCERG1O14776 1098 aaKnown RBP30.71■■■□□ 2.51
PTPN18-213ENST00000489215 TIAM2Q8IVF5 1701 aa30.7■■■□□ 2.51
PTPN18-213ENST00000489215 LAMB2P55268 1798 aa30.7■■■□□ 2.51
PTPN18-213ENST00000489215 E9PSI1 815 aa30.7■■■□□ 2.51
PTPN18-213ENST00000489215 IRS4O14654 1257 aaPredicted RBP30.7■■■□□ 2.51
PTPN18-213ENST00000489215 KIF3CO14782 793 aa30.7■■■□□ 2.51
PTPN18-213ENST00000489215 FLIIQ13045 1269 aa30.7■■■□□ 2.51
PTPN18-213ENST00000489215 SF3B3Q15393 1217 aaKnown RBP30.7■■■□□ 2.51
PTPN18-213ENST00000489215 PCCAP05165 728 aaPredicted RBP30.69■■■□□ 2.5
PTPN18-213ENST00000489215 DIEXFQ68CQ4 756 aaKnown RBP30.69■■■□□ 2.5
PTPN18-213ENST00000489215 ATP6V0A2Q9Y487 856 aa30.69■■■□□ 2.5
PTPN18-213ENST00000489215 ABCC4O15439 1325 aa30.69■■■□□ 2.5
PTPN18-213ENST00000489215 C16orf71Q8IYS4 520 aaPredicted RBP30.68■■■□□ 2.5
PTPN18-213ENST00000489215 DDX60Q8IY21 1712 aaKnown RBP30.67■■■□□ 2.5
PTPN18-213ENST00000489215 FKBP5Q13451 457 aaPredicted RBP30.67■■■□□ 2.5
PTPN18-213ENST00000489215 GRAPQ13588 217 aa30.67■■■□□ 2.5
PTPN18-213ENST00000489215 SP8Q8IXZ3 490 aa30.67■■■□□ 2.5
PTPN18-213ENST00000489215 GRAPLQ8TC17 118 aaPredicted RBP30.67■■■□□ 2.5
PTPN18-213ENST00000489215 NMRK2Q9NPI5 230 aa30.67■■■□□ 2.5
PTPN18-213ENST00000489215 TOMM70O94826 608 aa30.66■■■□□ 2.5
PTPN18-213ENST00000489215 G2E3Q7L622 706 aa30.66■■■□□ 2.5
PTPN18-213ENST00000489215 VPS33BQ9H267 617 aa30.66■■■□□ 2.5
PTPN18-213ENST00000489215 IARSP41252 1262 aaKnown RBP30.65■■■□□ 2.5
PTPN18-213ENST00000489215 RTL5Q5HYW3 569 aaPredicted RBP30.65■■■□□ 2.5
PTPN18-213ENST00000489215 OLFM4Q6UX06 510 aa30.65■■■□□ 2.5
PTPN18-213ENST00000489215 SUPT20HQ8NEM7 779 aa30.64■■■□□ 2.5
PTPN18-213ENST00000489215 ZNF277Q9NRM2 450 aaPredicted RBP30.64■■■□□ 2.5
PTPN18-213ENST00000489215 PDE8AO60658 829 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms