RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 VWA5B2Q8N398 1253 aa10.35□□□□□ -0.75
PHF11-215ENST00000488958 TMC1Q8TDI8 760 aa10.35□□□□□ -0.75
PHF11-215ENST00000488958 NUDT16Q96DE0 195 aaKnown RBP10.35□□□□□ -0.75
PHF11-215ENST00000488958 DCDC2BA2VCK2 349 aa10.34□□□□□ -0.75
PHF11-215ENST00000488958 BNIP3LO60238 219 aa10.34□□□□□ -0.75
PHF11-215ENST00000488958 FAM157BP0CG42 384 aa10.34□□□□□ -0.75
PHF11-215ENST00000488958 EPB42P16452 691 aa10.34□□□□□ -0.75
PHF11-215ENST00000488958 DNAJC14Q6Y2X3 702 aaPredicted RBP10.34□□□□□ -0.75
PHF11-215ENST00000488958 RBCK1Q9BYM8 510 aa10.34□□□□□ -0.75
PHF11-215ENST00000488958 USP5P45974 858 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 TNP2Q05952 138 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 ZSCAN29Q8IWY8 852 aaPredicted RBP10.33□□□□□ -0.76
PHF11-215ENST00000488958 ABHD17AQ96GS6 310 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 CITED4Q96RK1 184 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 NXF1Q9UBU9 619 aaKnown RBP10.33□□□□□ -0.76
PHF11-215ENST00000488958 EFSO43281 561 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 MAPTP10636 758 aaKnown RBP10.33□□□□□ -0.76
PHF11-215ENST00000488958 VEGFBP49765 207 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 SFSWAPQ12872 951 aaKnown RBP10.33□□□□□ -0.76
PHF11-215ENST00000488958 C8orf34Q49A92 452 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 FOXR1Q6PIV2 292 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 SV2AQ7L0J3 742 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 RGS22Q8NE09 1264 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 TTC16Q8NEE8 873 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 ASB16Q96NS5 453 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 NDFIP2Q9NV92 336 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 KCNH4Q9UQ05 1017 aa10.33□□□□□ -0.76
PHF11-215ENST00000488958 ANKRD33BA6NCL7 494 aa10.32□□□□□ -0.76
PHF11-215ENST00000488958 RPLP1P05386 114 aaKnown RBP10.32□□□□□ -0.76
PHF11-215ENST00000488958 GRNP28799 593 aaKnown RBP10.32□□□□□ -0.76
PHF11-215ENST00000488958 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
PHF11-215ENST00000488958 TMC7Q7Z402 723 aa10.32□□□□□ -0.76
PHF11-215ENST00000488958 GJD3Q8N144 294 aa10.32□□□□□ -0.76
PHF11-215ENST00000488958 GGNBP2Q9H3C7 697 aa10.32□□□□□ -0.76
PHF11-215ENST00000488958 GPR25O00155 361 aa10.31□□□□□ -0.76
PHF11-215ENST00000488958 NANOS1Q8WY41 292 aaKnown RBP10.31□□□□□ -0.76
PHF11-215ENST00000488958 TRERF1Q96PN7 1200 aa10.31□□□□□ -0.76
PHF11-215ENST00000488958 STRN4Q9NRL3 753 aa10.31□□□□□ -0.76
PHF11-215ENST00000488958 FNDC3AQ9Y2H6 1198 aaKnown RBP10.31□□□□□ -0.76
PHF11-215ENST00000488958 KCNMB2Q9Y691 235 aa10.31□□□□□ -0.76
PHF11-215ENST00000488958 UBAP1LF5GYI3 381 aa10.3□□□□□ -0.76
PHF11-215ENST00000488958 KCNQ4P56696 695 aa10.3□□□□□ -0.76
PHF11-215ENST00000488958 LAMC2Q13753 1193 aa10.3□□□□□ -0.76
PHF11-215ENST00000488958 MARK1Q9P0L2 795 aa10.3□□□□□ -0.76
PHF11-215ENST00000488958 ATXN7L1Q9ULK2 861 aaPredicted RBP10.3□□□□□ -0.76
PHF11-215ENST00000488958 PHF24Q9UPV7 400 aa10.3□□□□□ -0.76
PHF11-215ENST00000488958 A6NHS1 94 aa10.29□□□□□ -0.76
PHF11-215ENST00000488958 XYLBO75191 536 aa10.29□□□□□ -0.76
PHF11-215ENST00000488958 ERCC3P19447 782 aa10.29□□□□□ -0.76
PHF11-215ENST00000488958 CD33P20138 364 aa10.29□□□□□ -0.76
PHF11-215ENST00000488958 TRIP4Q15650 581 aaPredicted RBP10.29□□□□□ -0.76
PHF11-215ENST00000488958 DMRTB1Q96MA1 342 aa10.29□□□□□ -0.76
PHF11-215ENST00000488958 FAM129BQ96TA1 746 aa10.29□□□□□ -0.76
PHF11-215ENST00000488958 CFHR5Q9BXR6 569 aa10.29□□□□□ -0.76
PHF11-215ENST00000488958 HCN2Q9UL51 889 aa10.29□□□□□ -0.76
PHF11-215ENST00000488958 EHHADHQ08426 723 aa10.28□□□□□ -0.76
PHF11-215ENST00000488958 FGFR3P22607 806 aa10.27□□□□□ -0.77
PHF11-215ENST00000488958 GRIN2CQ14957 1233 aa10.27□□□□□ -0.77
PHF11-215ENST00000488958 NPAS3Q8IXF0 933 aa10.27□□□□□ -0.77
PHF11-215ENST00000488958 FOXD4L4Q8WXT5 416 aaPredicted RBP10.27□□□□□ -0.77
PHF11-215ENST00000488958 H3BM21 787 aa10.26□□□□□ -0.77
PHF11-215ENST00000488958 GPR182O15218 404 aa10.26□□□□□ -0.77
PHF11-215ENST00000488958 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
PHF11-215ENST00000488958 CCINQ13939 588 aa10.26□□□□□ -0.77
PHF11-215ENST00000488958 NIF3L1Q9GZT8 377 aa10.26□□□□□ -0.77
PHF11-215ENST00000488958 C11orf16Q9NQ32 467 aa10.26□□□□□ -0.77
PHF11-215ENST00000488958 TREHO43280 583 aa10.25□□□□□ -0.77
PHF11-215ENST00000488958 EGFRP00533 1210 aa10.25□□□□□ -0.77
PHF11-215ENST00000488958 IGHA2P01877 340 aa10.25□□□□□ -0.77
PHF11-215ENST00000488958 CTBSQ01459 385 aa10.25□□□□□ -0.77
PHF11-215ENST00000488958 ZNF438Q7Z4V0 828 aa10.25□□□□□ -0.77
PHF11-215ENST00000488958 NPAS4Q8IUM7 802 aa10.25□□□□□ -0.77
PHF11-215ENST00000488958 GSX2Q9BZM3 304 aa10.25□□□□□ -0.77
PHF11-215ENST00000488958 SASH3O75995 380 aa10.24□□□□□ -0.77
PHF11-215ENST00000488958 SPEM2Q0P670 501 aa10.24□□□□□ -0.77
PHF11-215ENST00000488958 PDE12Q6L8Q7 609 aaKnown RBP10.24□□□□□ -0.77
PHF11-215ENST00000488958 KRT25Q7Z3Z0 450 aa10.24□□□□□ -0.77
PHF11-215ENST00000488958 GPR161Q8N6U8 529 aaKnown RBP10.24□□□□□ -0.77
PHF11-215ENST00000488958 SLC30A3Q99726 388 aa10.24□□□□□ -0.77
PHF11-215ENST00000488958 ELP3Q9H9T3 547 aa10.24□□□□□ -0.77
PHF11-215ENST00000488958 TERTO14746 1132 aaKnown RBP10.23□□□□□ -0.77
PHF11-215ENST00000488958 DSC3Q14574 896 aa10.23□□□□□ -0.77
PHF11-215ENST00000488958 XKR5Q6UX68 686 aa10.23□□□□□ -0.77
PHF11-215ENST00000488958 NLRP13Q86W25 1043 aa10.23□□□□□ -0.77
PHF11-215ENST00000488958 ALKBH8Q96BT7 664 aaKnown RBP10.23□□□□□ -0.77
PHF11-215ENST00000488958 PNMA5Q96PV4 448 aa10.23□□□□□ -0.77
PHF11-215ENST00000488958 TARSP26639 723 aaKnown RBP10.22□□□□□ -0.77
PHF11-215ENST00000488958 FAM182BQ5T319 152 aa10.22□□□□□ -0.77
PHF11-215ENST00000488958 SLC16A10Q8TF71 515 aa10.22□□□□□ -0.77
PHF11-215ENST00000488958 TMEM63CQ9P1W3 806 aa10.22□□□□□ -0.77
PHF11-215ENST00000488958 RAB44Q7Z6P3 723 aaPredicted RBP10.21□□□□□ -0.78
PHF11-215ENST00000488958 BHMTQ93088 406 aa10.21□□□□□ -0.78
PHF11-215ENST00000488958 PRR12Q9ULL5 1215 aa10.21□□□□□ -0.78
PHF11-215ENST00000488958 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.21□□□□□ -0.78
PHF11-215ENST00000488958 TNFRSF21O75509 655 aa10.2□□□□□ -0.78
PHF11-215ENST00000488958 NEFLP07196 543 aa10.2□□□□□ -0.78
PHF11-215ENST00000488958 P4HBP07237 508 aaKnown RBP10.2□□□□□ -0.78
PHF11-215ENST00000488958 MX2P20592 715 aa10.2□□□□□ -0.78
PHF11-215ENST00000488958 MAPK8P45983 427 aa10.2□□□□□ -0.78
PHF11-215ENST00000488958 FMR1Q06787 632 aaKnown RBP eCLIP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms