RNA–Protein interactions for RNA: ENST00000488836.3

RN7SL28P-201, Transcript of RNA, 7SL, cytoplasmic 28, pseudogene, humanhuman

BASIC

Gene RN7SL28P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL28P-201ENST00000488836 RIC1Q4ADV7 1423 aa11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 LMOD1P29536 600 aaPredicted RBP11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 EIF6P56537 245 aaKnown RBP11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 DCTN1Q14203 1278 aa11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 SYNE4Q8N205 404 aa11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 MAP3K15Q6ZN16 1313 aa11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 ZNF541Q9H0D2 1346 aa11.29□□□□□ -0.6
RN7SL28P-201ENST00000488836 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
RN7SL28P-201ENST00000488836 HLFQ16534 295 aa11.28□□□□□ -0.6
RN7SL28P-201ENST00000488836 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
RN7SL28P-201ENST00000488836 ERBB4Q15303 1308 aa11.28□□□□□ -0.6
RN7SL28P-201ENST00000488836 RNF123Q5XPI4 1314 aa11.28□□□□□ -0.6
RN7SL28P-201ENST00000488836 ADAMTSL1Q8N6G6 1762 aa11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 RASSF10A6NK89 507 aa11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 FOXN1O15353 648 aa11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 VEGFBP49765 207 aa11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 MAP2K1Q02750 393 aaPredicted RBP11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 PPP1R42Q7Z4L9 355 aa11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 NUP98P52948 1817 aa11.27□□□□□ -0.61
RN7SL28P-201ENST00000488836 KDM3BQ7LBC6 1761 aa11.26□□□□□ -0.61
RN7SL28P-201ENST00000488836 PARP10Q53GL7 1025 aa11.26□□□□□ -0.61
RN7SL28P-201ENST00000488836 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
RN7SL28P-201ENST00000488836 NGEFQ8N5V2 710 aa11.26□□□□□ -0.61
RN7SL28P-201ENST00000488836 CRAMP1Q96RY5 1269 aa11.26□□□□□ -0.61
RN7SL28P-201ENST00000488836 VPS33BQ9H267 617 aa11.26□□□□□ -0.61
RN7SL28P-201ENST00000488836 RRP7AQ9Y3A4 280 aaKnown RBP11.26□□□□□ -0.61
RN7SL28P-201ENST00000488836 MAPK8IP3Q9UPT6 1336 aa11.26□□□□□ -0.61
RN7SL28P-201ENST00000488836 ECE1P42892 770 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 EIF4A1P60842 406 aaKnown RBP11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 MAP1SQ66K74 1059 aaPredicted RBP11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 OLFM4Q6UX06 510 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 USP50Q70EL3 339 aaPredicted RBP11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 NLRP3Q96P20 1036 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 ABCC12Q96J65 1359 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
RN7SL28P-201ENST00000488836 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 MYL6BP14649 208 aa11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 NFE2L2Q16236 605 aa11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 GIGYF2Q6Y7W6 1299 aaKnown RBP11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 NIM1KQ8IY84 436 aa11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 SUPT20HQ8NEM7 779 aa11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 ZBTB3Q9H5J0 574 aa11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 DDX21Q9NR30 783 aaKnown RBP eCLIP11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 DLG5Q8TDM6 1919 aa11.24□□□□□ -0.61
RN7SL28P-201ENST00000488836 GPTP24298 496 aa11.23□□□□□ -0.61
RN7SL28P-201ENST00000488836 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
RN7SL28P-201ENST00000488836 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
RN7SL28P-201ENST00000488836 ZNF34Q8IZ26 560 aa11.23□□□□□ -0.61
RN7SL28P-201ENST00000488836 BABAM1Q9NWV8 329 aa11.23□□□□□ -0.61
RN7SL28P-201ENST00000488836 WDR33Q9C0J8 1336 aaKnown RBP11.23□□□□□ -0.61
RN7SL28P-201ENST00000488836 PPIP5K2O43314 1243 aa11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 NTSR2O95665 410 aa11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 SCNN1DP51172 638 aa11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 LBX1P52954 281 aa11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 SUSD4Q5VX71 490 aa11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 UBN2Q6ZU65 1347 aa11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 UTP14AQ9BVJ6 771 aaKnown RBP11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 TSPYL4Q9UJ04 414 aa11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
RN7SL28P-201ENST00000488836 CDHR2Q9BYE9 1310 aa11.21□□□□□ -0.61
RN7SL28P-201ENST00000488836 BBOX1O75936 387 aa11.21□□□□□ -0.61
RN7SL28P-201ENST00000488836 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
RN7SL28P-201ENST00000488836 SLC10A5Q5PT55 438 aa11.21□□□□□ -0.61
RN7SL28P-201ENST00000488836 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
RN7SL28P-201ENST00000488836 ADARB2Q9NS39 739 aaKnown RBP11.21□□□□□ -0.61
RN7SL28P-201ENST00000488836 ZNRF3Q9ULT6 936 aa11.21□□□□□ -0.61
RN7SL28P-201ENST00000488836 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
RN7SL28P-201ENST00000488836 TMC4Q7Z404 712 aa11.2□□□□□ -0.62
RN7SL28P-201ENST00000488836 CAPNS2Q96L46 248 aa11.2□□□□□ -0.62
RN7SL28P-201ENST00000488836 GPRC5DQ9NZD1 345 aa11.2□□□□□ -0.62
RN7SL28P-201ENST00000488836 TRPM7Q96QT4 1865 aa11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 TCERG1O14776 1098 aaKnown RBP11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 CA12O43570 354 aa11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 HSPA8P11142 646 aaKnown RBP11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 MAP2K2P36507 400 aa11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 EPS15P42566 896 aa11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 TNIP1Q15025 636 aa11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 SP8Q8IXZ3 490 aa11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 GPR101Q96P66 508 aaPredicted RBP11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 THSD7BQ9C0I4 1608 aa11.19□□□□□ -0.62
RN7SL28P-201ENST00000488836 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
RN7SL28P-201ENST00000488836 COL4A5P29400 1685 aa11.18□□□□□ -0.62
RN7SL28P-201ENST00000488836 EIF2S2P20042 333 aaKnown RBP11.18□□□□□ -0.62
RN7SL28P-201ENST00000488836 AOC3Q16853 763 aa11.18□□□□□ -0.62
RN7SL28P-201ENST00000488836 DDX46Q7L014 1031 aaKnown RBP11.18□□□□□ -0.62
RN7SL28P-201ENST00000488836 ZC3H15Q8WU90 426 aaKnown RBP11.18□□□□□ -0.62
RN7SL28P-201ENST00000488836 HHIPL1Q96JK4 782 aa11.18□□□□□ -0.62
RN7SL28P-201ENST00000488836 THUMPD2Q9BTF0 503 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms