RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
PHF1-210ENST00000488767 SH3TC1Q8TE82 1336 aa16.48■□□□□ 0.23
PHF1-210ENST00000488767 RIC1Q4ADV7 1423 aa16.48■□□□□ 0.23
PHF1-210ENST00000488767 ALDH1B1P30837 517 aa16.48■□□□□ 0.23
PHF1-210ENST00000488767 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
PHF1-210ENST00000488767 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
PHF1-210ENST00000488767 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
PHF1-210ENST00000488767 FLIIQ13045 1269 aa16.47■□□□□ 0.23
PHF1-210ENST00000488767 FKBP5Q13451 457 aaPredicted RBP16.47■□□□□ 0.23
PHF1-210ENST00000488767 KSR2Q6VAB6 950 aa16.47■□□□□ 0.23
PHF1-210ENST00000488767 MYD88Q99836 296 aa16.47■□□□□ 0.23
PHF1-210ENST00000488767 ABCC12Q96J65 1359 aa16.47■□□□□ 0.23
PHF1-210ENST00000488767 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.23
PHF1-210ENST00000488767 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.23
PHF1-210ENST00000488767 ANKRD31Q8N7Z5 1873 aa16.46■□□□□ 0.23
PHF1-210ENST00000488767 KLRG2A4D1S0 409 aaPredicted RBP16.46■□□□□ 0.23
PHF1-210ENST00000488767 PI4KAP2A4QPH2 592 aa16.46■□□□□ 0.23
PHF1-210ENST00000488767 ATP5J2-PTCD1G3V325 749 aa16.46■□□□□ 0.23
PHF1-210ENST00000488767 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
PHF1-210ENST00000488767 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
PHF1-210ENST00000488767 PI4KAP1Q8N8J0 262 aa16.46■□□□□ 0.23
PHF1-210ENST00000488767 RBM17Q96I25 401 aaKnown RBP16.46■□□□□ 0.23
PHF1-210ENST00000488767 ISCA1Q9BUE6 129 aa16.46■□□□□ 0.23
PHF1-210ENST00000488767 METTL22Q9BUU2 404 aaPredicted RBP16.46■□□□□ 0.23
PHF1-210ENST00000488767 TMX4Q9H1E5 349 aaPredicted RBP16.46■□□□□ 0.23
PHF1-210ENST00000488767 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
PHF1-210ENST00000488767 CHD4Q14839 1912 aa16.45■□□□□ 0.22
PHF1-210ENST00000488767 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
PHF1-210ENST00000488767 TRMT2AQ8IZ69 625 aaKnown RBP16.45■□□□□ 0.22
PHF1-210ENST00000488767 CCDC191Q8NCU4 936 aa16.45■□□□□ 0.22
PHF1-210ENST00000488767 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
PHF1-210ENST00000488767 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
PHF1-210ENST00000488767 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
PHF1-210ENST00000488767 CRY2Q49AN0 593 aa16.44■□□□□ 0.22
PHF1-210ENST00000488767 SLC10A5Q5PT55 438 aa16.44■□□□□ 0.22
PHF1-210ENST00000488767 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
PHF1-210ENST00000488767 ARFGEF1Q9Y6D6 1849 aa16.44■□□□□ 0.22
PHF1-210ENST00000488767 CACNA1FO60840 1977 aa16.44■□□□□ 0.22
PHF1-210ENST00000488767 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
PHF1-210ENST00000488767 C21orf2O43822 256 aa16.43■□□□□ 0.22
PHF1-210ENST00000488767 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
PHF1-210ENST00000488767 HCLS1P14317 486 aaPredicted RBP16.42■□□□□ 0.22
PHF1-210ENST00000488767 G2E3Q7L622 706 aa16.42■□□□□ 0.22
PHF1-210ENST00000488767 ZBTB38Q8NAP3 1195 aaPredicted RBP16.42■□□□□ 0.22
PHF1-210ENST00000488767 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
PHF1-210ENST00000488767 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
PHF1-210ENST00000488767 HOXA10P31260 410 aaPredicted RBP16.41■□□□□ 0.22
PHF1-210ENST00000488767 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
PHF1-210ENST00000488767 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
PHF1-210ENST00000488767 DNAAF4Q8WXU2 420 aa16.41■□□□□ 0.22
PHF1-210ENST00000488767 ADCY9O60503 1353 aa16.4■□□□□ 0.22
PHF1-210ENST00000488767 IRS4O14654 1257 aaPredicted RBP16.4■□□□□ 0.22
PHF1-210ENST00000488767 RTL5Q5HYW3 569 aaPredicted RBP16.4■□□□□ 0.22
PHF1-210ENST00000488767 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
PHF1-210ENST00000488767 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
PHF1-210ENST00000488767 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
PHF1-210ENST00000488767 PCCAP05165 728 aaPredicted RBP16.39■□□□□ 0.21
PHF1-210ENST00000488767 LMNB1P20700 586 aa16.39■□□□□ 0.21
PHF1-210ENST00000488767 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
PHF1-210ENST00000488767 CC2D2BQ6DHV5 1058 aa16.39■□□□□ 0.21
PHF1-210ENST00000488767 TAOK3Q9H2K8 898 aa16.39■□□□□ 0.21
PHF1-210ENST00000488767 RNF181Q9P0P0 153 aa16.39■□□□□ 0.21
PHF1-210ENST00000488767 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
PHF1-210ENST00000488767 ALDH1L2Q3SY69 923 aa16.38■□□□□ 0.21
PHF1-210ENST00000488767 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
PHF1-210ENST00000488767 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
PHF1-210ENST00000488767 SMC4Q9NTJ3 1288 aa16.38■□□□□ 0.21
PHF1-210ENST00000488767 NEURL1BA8MQ27 555 aa16.37■□□□□ 0.21
PHF1-210ENST00000488767 BBOX1O75936 387 aa16.37■□□□□ 0.21
PHF1-210ENST00000488767 ZNF784Q8NCA9 323 aaPredicted RBP16.37■□□□□ 0.21
PHF1-210ENST00000488767 PTPRCP08575 1304 aa16.37■□□□□ 0.21
PHF1-210ENST00000488767 PDE8AO60658 829 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 RASSF7Q02833 373 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
PHF1-210ENST00000488767 CCDC152Q4G0S7 254 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 SLC4A10Q6U841 1118 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 SYNE4Q8N205 404 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 LTBP3Q9NS15 1303 aa16.36■□□□□ 0.21
PHF1-210ENST00000488767 ZC3H4Q9UPT8 1303 aaKnown RBP16.36■□□□□ 0.21
PHF1-210ENST00000488767 NFKBIEO00221 500 aa16.35■□□□□ 0.21
PHF1-210ENST00000488767 GRAPQ13588 217 aa16.35■□□□□ 0.21
PHF1-210ENST00000488767 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
PHF1-210ENST00000488767 MRPL50Q8N5N7 158 aaKnown RBP16.35■□□□□ 0.21
PHF1-210ENST00000488767 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
PHF1-210ENST00000488767 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
PHF1-210ENST00000488767 SSH1Q8WYL5 1049 aa16.35■□□□□ 0.21
PHF1-210ENST00000488767 ABCC4O15439 1325 aa16.35■□□□□ 0.21
PHF1-210ENST00000488767 CDHR2Q9BYE9 1310 aa16.35■□□□□ 0.21
PHF1-210ENST00000488767 CACNA1SQ13698 1873 aa16.35■□□□□ 0.21
PHF1-210ENST00000488767 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
PHF1-210ENST00000488767 F6X3S4 739 aa16.34■□□□□ 0.21
PHF1-210ENST00000488767 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
PHF1-210ENST00000488767 GCKRQ14397 625 aa16.34■□□□□ 0.21
PHF1-210ENST00000488767 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
PHF1-210ENST00000488767 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
PHF1-210ENST00000488767 SRCIN1Q9C0H9 1055 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms