RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ATP5J2-PTCD1G3V325 749 aa19.26■□□□□ 0.67
CXCL12-207ENST00000488591 SRGNP10124 158 aa19.26■□□□□ 0.67
CXCL12-207ENST00000488591 TRIM28Q13263 835 aaKnown RBP19.26■□□□□ 0.67
CXCL12-207ENST00000488591 CNKSR1Q969H4 720 aa19.26■□□□□ 0.67
CXCL12-207ENST00000488591 ISCA1Q9BUE6 129 aa19.26■□□□□ 0.67
CXCL12-207ENST00000488591 DLEC1Q9Y238 1755 aa19.26■□□□□ 0.67
CXCL12-207ENST00000488591 ARFGEF2Q9Y6D5 1785 aa19.26■□□□□ 0.67
CXCL12-207ENST00000488591 KLRG2A4D1S0 409 aaPredicted RBP19.25■□□□□ 0.67
CXCL12-207ENST00000488591 PI4KAP2A4QPH2 592 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 NPR1P16066 1061 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 NEXNQ0ZGT2 675 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 FLIIQ13045 1269 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 ARHGAP27Q6ZUM4 889 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 PI4KAP1Q8N8J0 262 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 MYD88Q99836 296 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 METTL22Q9BUU2 404 aaPredicted RBP19.25■□□□□ 0.67
CXCL12-207ENST00000488591 MAP3K2Q9Y2U5 619 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 SH3TC1Q8TE82 1336 aa19.25■□□□□ 0.67
CXCL12-207ENST00000488591 YY1P25490 414 aa19.24■□□□□ 0.67
CXCL12-207ENST00000488591 FKBP5Q13451 457 aaPredicted RBP19.24■□□□□ 0.67
CXCL12-207ENST00000488591 SLC10A5Q5PT55 438 aa19.24■□□□□ 0.67
CXCL12-207ENST00000488591 G2E3Q7L622 706 aa19.24■□□□□ 0.67
CXCL12-207ENST00000488591 TRMT2AQ8IZ69 625 aaKnown RBP19.24■□□□□ 0.67
CXCL12-207ENST00000488591 ZNF428Q96B54 188 aa19.24■□□□□ 0.67
CXCL12-207ENST00000488591 NLRP3Q96P20 1036 aa19.24■□□□□ 0.67
CXCL12-207ENST00000488591 CHD4Q14839 1912 aa19.23■□□□□ 0.67
CXCL12-207ENST00000488591 ARFGEF1Q9Y6D6 1849 aa19.23■□□□□ 0.67
CXCL12-207ENST00000488591 ABCC12Q96J65 1359 aa19.23■□□□□ 0.67
CXCL12-207ENST00000488591 RIC1Q4ADV7 1423 aa19.23■□□□□ 0.67
CXCL12-207ENST00000488591 ALDH1B1P30837 517 aa19.22■□□□□ 0.67
CXCL12-207ENST00000488591 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
CXCL12-207ENST00000488591 RPGRQ92834 1020 aaKnown RBP19.22■□□□□ 0.67
CXCL12-207ENST00000488591 CT47B1P0C2W7 299 aaPredicted RBP19.21■□□□□ 0.67
CXCL12-207ENST00000488591 COL11A2P13942 1736 aaPredicted RBP19.21■□□□□ 0.67
CXCL12-207ENST00000488591 HSP90B1P14625 803 aaKnown RBP19.21■□□□□ 0.67
CXCL12-207ENST00000488591 CRY2Q49AN0 593 aa19.21■□□□□ 0.67
CXCL12-207ENST00000488591 CWC25Q9NXE8 425 aaPredicted RBP19.21■□□□□ 0.67
CXCL12-207ENST00000488591 ADCY9O60503 1353 aa19.2■□□□□ 0.66
CXCL12-207ENST00000488591 RBM17Q96I25 401 aaKnown RBP19.2■□□□□ 0.66
CXCL12-207ENST00000488591 HCLS1P14317 486 aaPredicted RBP19.19■□□□□ 0.66
CXCL12-207ENST00000488591 PRPF40BQ6NWY9 871 aaKnown RBP19.19■□□□□ 0.66
CXCL12-207ENST00000488591 ZBTB38Q8NAP3 1195 aaPredicted RBP19.19■□□□□ 0.66
CXCL12-207ENST00000488591 DNAAF4Q8WXU2 420 aa19.19■□□□□ 0.66
CXCL12-207ENST00000488591 FAM89AQ96GI7 184 aa19.19■□□□□ 0.66
CXCL12-207ENST00000488591 C21orf2O43822 256 aa19.18■□□□□ 0.66
CXCL12-207ENST00000488591 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
CXCL12-207ENST00000488591 SOGA3Q5TF21 947 aa19.18■□□□□ 0.66
CXCL12-207ENST00000488591 SYNE4Q8N205 404 aa19.18■□□□□ 0.66
CXCL12-207ENST00000488591 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-207ENST00000488591 TNRC6CQ9HCJ0 1690 aaKnown RBP19.17■□□□□ 0.66
CXCL12-207ENST00000488591 IRS4O14654 1257 aaPredicted RBP19.17■□□□□ 0.66
CXCL12-207ENST00000488591 HOXA10P31260 410 aaPredicted RBP19.17■□□□□ 0.66
CXCL12-207ENST00000488591 RTL5Q5HYW3 569 aaPredicted RBP19.17■□□□□ 0.66
CXCL12-207ENST00000488591 GOLGB1Q14789 3259 aaKnown RBP19.16■□□□□ 0.66
CXCL12-207ENST00000488591 PCCAP05165 728 aaPredicted RBP19.16■□□□□ 0.66
CXCL12-207ENST00000488591 IGKV5-2P06315 115 aa19.16■□□□□ 0.66
CXCL12-207ENST00000488591 MRPL50Q8N5N7 158 aaKnown RBP19.16■□□□□ 0.66
CXCL12-207ENST00000488591 SSH1Q8WYL5 1049 aa19.16■□□□□ 0.66
CXCL12-207ENST00000488591 CRAMP1Q96RY5 1269 aa19.16■□□□□ 0.66
CXCL12-207ENST00000488591 ZBED9Q6R2W3 1325 aa19.16■□□□□ 0.66
CXCL12-207ENST00000488591 CACNA1SQ13698 1873 aa19.16■□□□□ 0.66
CXCL12-207ENST00000488591 NEURL1BA8MQ27 555 aa19.15■□□□□ 0.66
CXCL12-207ENST00000488591 C3orf67Q6ZVT6 689 aa19.15■□□□□ 0.66
CXCL12-207ENST00000488591 LINS1Q8NG48 757 aa19.15■□□□□ 0.66
CXCL12-207ENST00000488591 SLX4Q8IY92 1834 aa19.15■□□□□ 0.66
CXCL12-207ENST00000488591 CWF19L2Q2TBE0 894 aaKnown RBP19.14■□□□□ 0.65
CXCL12-207ENST00000488591 DDX46Q7L014 1031 aaKnown RBP19.14■□□□□ 0.65
CXCL12-207ENST00000488591 TMX4Q9H1E5 349 aaPredicted RBP19.14■□□□□ 0.65
CXCL12-207ENST00000488591 SMC4Q9NTJ3 1288 aa19.14■□□□□ 0.65
CXCL12-207ENST00000488591 PTPRCP08575 1304 aa19.14■□□□□ 0.65
CXCL12-207ENST00000488591 F6X3S4 739 aa19.13■□□□□ 0.65
CXCL12-207ENST00000488591 BCL2L13Q9BXK5 485 aa19.13■□□□□ 0.65
CXCL12-207ENST00000488591 CDHR2Q9BYE9 1310 aa19.12■□□□□ 0.65
CXCL12-207ENST00000488591 PDE8AO60658 829 aa19.12■□□□□ 0.65
CXCL12-207ENST00000488591 GCKRQ14397 625 aa19.12■□□□□ 0.65
CXCL12-207ENST00000488591 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
CXCL12-207ENST00000488591 CCDC93Q567U6 631 aa19.12■□□□□ 0.65
CXCL12-207ENST00000488591 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
CXCL12-207ENST00000488591 C7orf43Q8WVR3 580 aa19.12■□□□□ 0.65
CXCL12-207ENST00000488591 UTRNP46939 3433 aa19.11■□□□□ 0.65
CXCL12-207ENST00000488591 BBOX1O75936 387 aa19.11■□□□□ 0.65
CXCL12-207ENST00000488591 CC2D2BQ6DHV5 1058 aa19.11■□□□□ 0.65
CXCL12-207ENST00000488591 RTKN2Q8IZC4 609 aa19.11■□□□□ 0.65
CXCL12-207ENST00000488591 JARID2Q92833 1246 aaPredicted RBP19.11■□□□□ 0.65
CXCL12-207ENST00000488591 LAMB2P55268 1798 aa19.11■□□□□ 0.65
CXCL12-207ENST00000488591 DDX60Q8IY21 1712 aaKnown RBP19.11■□□□□ 0.65
CXCL12-207ENST00000488591 H7C1W4 665 aa19.1■□□□□ 0.65
CXCL12-207ENST00000488591 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
CXCL12-207ENST00000488591 GRIPAP1Q4V328 841 aa19.1■□□□□ 0.65
CXCL12-207ENST00000488591 BEND3Q5T5X7 828 aa19.1■□□□□ 0.65
CXCL12-207ENST00000488591 C9orf131Q5VYM1 1079 aa19.1■□□□□ 0.65
CXCL12-207ENST00000488591 ABCC4O15439 1325 aa19.09■□□□□ 0.65
CXCL12-207ENST00000488591 LMNB1P20700 586 aa19.09■□□□□ 0.65
CXCL12-207ENST00000488591 RASSF7Q02833 373 aa19.09■□□□□ 0.65
CXCL12-207ENST00000488591 GRAPQ13588 217 aa19.09■□□□□ 0.65
CXCL12-207ENST00000488591 CCDC152Q4G0S7 254 aa19.09■□□□□ 0.65
CXCL12-207ENST00000488591 UBE3BQ7Z3V4 1068 aa19.09■□□□□ 0.65
CXCL12-207ENST00000488591 GRAPLQ8TC17 118 aaPredicted RBP19.09■□□□□ 0.65
CXCL12-207ENST00000488591 SRCIN1Q9C0H9 1055 aa19.09■□□□□ 0.65
CXCL12-207ENST00000488591 TAOK3Q9H2K8 898 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms