RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 NPR1P16066 1061 aa18.36■□□□□ 0.53
COL9A2-208ENST00000488463 LAMB2P55268 1798 aa18.36■□□□□ 0.53
COL9A2-208ENST00000488463 TWISTNBQ3B726 338 aaPredicted RBP18.36■□□□□ 0.53
COL9A2-208ENST00000488463 CCDC88AQ3V6T2 1871 aa18.36■□□□□ 0.53
COL9A2-208ENST00000488463 SLC10A5Q5PT55 438 aa18.36■□□□□ 0.53
COL9A2-208ENST00000488463 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
COL9A2-208ENST00000488463 PRPF40BQ6NWY9 871 aaKnown RBP18.36■□□□□ 0.53
COL9A2-208ENST00000488463 C3orf67Q6ZVT6 689 aa18.36■□□□□ 0.53
COL9A2-208ENST00000488463 PPP1R42Q7Z4L9 355 aa18.35■□□□□ 0.53
COL9A2-208ENST00000488463 SYNE4Q8N205 404 aa18.35■□□□□ 0.53
COL9A2-208ENST00000488463 CNKSR1Q969H4 720 aa18.35■□□□□ 0.53
COL9A2-208ENST00000488463 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
COL9A2-208ENST00000488463 RNF123Q5XPI4 1314 aa18.34■□□□□ 0.53
COL9A2-208ENST00000488463 RASSF7Q02833 373 aa18.34■□□□□ 0.53
COL9A2-208ENST00000488463 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
COL9A2-208ENST00000488463 UTP14AQ9BVJ6 771 aaKnown RBP18.34■□□□□ 0.53
COL9A2-208ENST00000488463 DDX60Q8IY21 1712 aaKnown RBP18.34■□□□□ 0.53
COL9A2-208ENST00000488463 SNED1Q8TER0 1413 aa18.33■□□□□ 0.53
COL9A2-208ENST00000488463 C21orf2O43822 256 aa18.33■□□□□ 0.52
COL9A2-208ENST00000488463 VAMP4O75379 141 aa18.33■□□□□ 0.52
COL9A2-208ENST00000488463 GTF2E1P29083 439 aaPredicted RBP18.33■□□□□ 0.52
COL9A2-208ENST00000488463 HOXA10P31260 410 aaPredicted RBP18.33■□□□□ 0.52
COL9A2-208ENST00000488463 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.52
COL9A2-208ENST00000488463 C9orf131Q5VYM1 1079 aa18.33■□□□□ 0.52
COL9A2-208ENST00000488463 DICER1Q9UPY3 1922 aaKnown RBP18.32■□□□□ 0.52
COL9A2-208ENST00000488463 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
COL9A2-208ENST00000488463 G2E3Q7L622 706 aa18.32■□□□□ 0.52
COL9A2-208ENST00000488463 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
COL9A2-208ENST00000488463 ATP5J2-PTCD1G3V325 749 aa18.31■□□□□ 0.52
COL9A2-208ENST00000488463 LTBP3Q9NS15 1303 aa18.3■□□□□ 0.52
COL9A2-208ENST00000488463 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
COL9A2-208ENST00000488463 OLFM4Q6UX06 510 aa18.3■□□□□ 0.52
COL9A2-208ENST00000488463 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
COL9A2-208ENST00000488463 TRMT112Q9UI30 125 aaKnown RBP18.3■□□□□ 0.52
COL9A2-208ENST00000488463 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
COL9A2-208ENST00000488463 LMNB1P20700 586 aa18.29■□□□□ 0.52
COL9A2-208ENST00000488463 ALDH1B1P30837 517 aa18.29■□□□□ 0.52
COL9A2-208ENST00000488463 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
COL9A2-208ENST00000488463 SLC51AQ86UW1 340 aa18.29■□□□□ 0.52
COL9A2-208ENST00000488463 ZNF428Q96B54 188 aa18.29■□□□□ 0.52
COL9A2-208ENST00000488463 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
COL9A2-208ENST00000488463 RNF181Q9P0P0 153 aa18.29■□□□□ 0.52
COL9A2-208ENST00000488463 TIAM2Q8IVF5 1701 aa18.29■□□□□ 0.52
COL9A2-208ENST00000488463 SH3TC1Q8TE82 1336 aa18.28■□□□□ 0.52
COL9A2-208ENST00000488463 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
COL9A2-208ENST00000488463 RIC3Q7Z5B4 369 aa18.28■□□□□ 0.52
COL9A2-208ENST00000488463 CRAMP1Q96RY5 1269 aa18.28■□□□□ 0.52
COL9A2-208ENST00000488463 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
COL9A2-208ENST00000488463 TAF1P21675 1872 aa18.28■□□□□ 0.52
COL9A2-208ENST00000488463 KSR2Q6VAB6 950 aa18.27■□□□□ 0.52
COL9A2-208ENST00000488463 MIER1Q8N108 512 aa18.27■□□□□ 0.52
COL9A2-208ENST00000488463 FAM89AQ96GI7 184 aa18.27■□□□□ 0.52
COL9A2-208ENST00000488463 NLRP3Q96P20 1036 aa18.27■□□□□ 0.52
COL9A2-208ENST00000488463 STK31Q9BXU1 1019 aa18.27■□□□□ 0.52
COL9A2-208ENST00000488463 GPBP1L1Q9HC44 474 aaPredicted RBP18.27■□□□□ 0.52
COL9A2-208ENST00000488463 COL4A1P02462 1669 aa18.27■□□□□ 0.52
COL9A2-208ENST00000488463 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
COL9A2-208ENST00000488463 IGKV5-2P06315 115 aa18.26■□□□□ 0.51
COL9A2-208ENST00000488463 SOGA3Q5TF21 947 aa18.26■□□□□ 0.51
COL9A2-208ENST00000488463 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
COL9A2-208ENST00000488463 MYD88Q99836 296 aa18.26■□□□□ 0.51
COL9A2-208ENST00000488463 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
COL9A2-208ENST00000488463 ZC3H4Q9UPT8 1303 aaKnown RBP18.25■□□□□ 0.51
COL9A2-208ENST00000488463 DDX58O95786 925 aaKnown RBP18.25■□□□□ 0.51
COL9A2-208ENST00000488463 SLFN5Q08AF3 891 aa18.25■□□□□ 0.51
COL9A2-208ENST00000488463 FLIIQ13045 1269 aa18.25■□□□□ 0.51
COL9A2-208ENST00000488463 CCDC93Q567U6 631 aa18.25■□□□□ 0.51
COL9A2-208ENST00000488463 CCDC191Q8NCU4 936 aa18.25■□□□□ 0.51
COL9A2-208ENST00000488463 ZNF526Q8TF50 670 aaPredicted RBP18.25■□□□□ 0.51
COL9A2-208ENST00000488463 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
COL9A2-208ENST00000488463 TAOK3Q9H2K8 898 aa18.25■□□□□ 0.51
COL9A2-208ENST00000488463 ABCC4O15439 1325 aa18.24■□□□□ 0.51
COL9A2-208ENST00000488463 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
COL9A2-208ENST00000488463 RBM17Q96I25 401 aaKnown RBP18.24■□□□□ 0.51
COL9A2-208ENST00000488463 KIF3CO14782 793 aa18.23■□□□□ 0.51
COL9A2-208ENST00000488463 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
COL9A2-208ENST00000488463 CDCA7LQ96GN5 454 aa18.23■□□□□ 0.51
COL9A2-208ENST00000488463 E9PSI1 815 aa18.22■□□□□ 0.51
COL9A2-208ENST00000488463 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
COL9A2-208ENST00000488463 FKBP4Q02790 459 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL9A2-208ENST00000488463 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
COL9A2-208ENST00000488463 LRRC37AA6NMS7 1700 aa18.21■□□□□ 0.51
COL9A2-208ENST00000488463 IRS4O14654 1257 aaPredicted RBP18.21■□□□□ 0.51
COL9A2-208ENST00000488463 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
COL9A2-208ENST00000488463 RTKN2Q8IZC4 609 aa18.21■□□□□ 0.51
COL9A2-208ENST00000488463 CWC25Q9NXE8 425 aaPredicted RBP18.21■□□□□ 0.51
COL9A2-208ENST00000488463 COL4A5P29400 1685 aa18.21■□□□□ 0.51
COL9A2-208ENST00000488463 NEURL1BA8MQ27 555 aa18.2■□□□□ 0.5
COL9A2-208ENST00000488463 PPEF1O14829 653 aaPredicted RBP18.2■□□□□ 0.5
COL9A2-208ENST00000488463 CWF19L2Q2TBE0 894 aaKnown RBP18.2■□□□□ 0.5
COL9A2-208ENST00000488463 CC2D2BQ6DHV5 1058 aa18.2■□□□□ 0.5
COL9A2-208ENST00000488463 PSMD1Q99460 953 aa18.2■□□□□ 0.5
COL9A2-208ENST00000488463 NMRK2Q9NPI5 230 aa18.2■□□□□ 0.5
COL9A2-208ENST00000488463 JARID2Q92833 1246 aaPredicted RBP18.19■□□□□ 0.5
COL9A2-208ENST00000488463 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
COL9A2-208ENST00000488463 ATP6V0A2Q9Y487 856 aa18.19■□□□□ 0.5
COL9A2-208ENST00000488463 GLTPD2A6NH11 291 aa18.18■□□□□ 0.5
COL9A2-208ENST00000488463 BBOX1O75936 387 aa18.18■□□□□ 0.5
COL9A2-208ENST00000488463 HSPA6P17066 643 aa18.18■□□□□ 0.5
COL9A2-208ENST00000488463 FKBP5Q13451 457 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms