RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
ERGIC3-216ENST00000488384 KLRG2A4D1S0 409 aaPredicted RBP20.54■□□□□ 0.88
ERGIC3-216ENST00000488384 GTF2E1P29083 439 aaPredicted RBP20.54■□□□□ 0.88
ERGIC3-216ENST00000488384 PPP1R42Q7Z4L9 355 aa20.54■□□□□ 0.88
ERGIC3-216ENST00000488384 TRMT2AQ8IZ69 625 aaKnown RBP20.54■□□□□ 0.88
ERGIC3-216ENST00000488384 UTP14AQ9BVJ6 771 aaKnown RBP20.54■□□□□ 0.88
ERGIC3-216ENST00000488384 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
ERGIC3-216ENST00000488384 DDX58O95786 925 aaKnown RBP20.53■□□□□ 0.88
ERGIC3-216ENST00000488384 SRGNP10124 158 aa20.53■□□□□ 0.88
ERGIC3-216ENST00000488384 HNRNPUQ00839 825 aaKnown RBP eCLIP20.53■□□□□ 0.88
ERGIC3-216ENST00000488384 CACNA1SQ13698 1873 aa20.52■□□□□ 0.88
ERGIC3-216ENST00000488384 ATP5J2-PTCD1G3V325 749 aa20.52■□□□□ 0.88
ERGIC3-216ENST00000488384 FLIIQ13045 1269 aa20.52■□□□□ 0.88
ERGIC3-216ENST00000488384 MAP3K2Q9Y2U5 619 aa20.52■□□□□ 0.88
ERGIC3-216ENST00000488384 PI4KAP2A4QPH2 592 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 C1QTNF8P60827 252 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 STYK1Q6J9G0 422 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 KSR2Q6VAB6 950 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 TTLL6Q8N841 843 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 PI4KAP1Q8N8J0 262 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 ZNF428Q96B54 188 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 MYD88Q99836 296 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 METTL22Q9BUU2 404 aaPredicted RBP20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 LAMB2P55268 1798 aa20.51■□□□□ 0.87
ERGIC3-216ENST00000488384 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
ERGIC3-216ENST00000488384 SBF1O95248 1867 aa20.5■□□□□ 0.87
ERGIC3-216ENST00000488384 TRIM28Q13263 835 aaKnown RBP20.5■□□□□ 0.87
ERGIC3-216ENST00000488384 CRY2Q49AN0 593 aa20.5■□□□□ 0.87
ERGIC3-216ENST00000488384 C3orf67Q6ZVT6 689 aa20.5■□□□□ 0.87
ERGIC3-216ENST00000488384 MASTLQ96GX5 879 aa20.5■□□□□ 0.87
ERGIC3-216ENST00000488384 TRMT112Q9UI30 125 aaKnown RBP20.5■□□□□ 0.87
ERGIC3-216ENST00000488384 SLX4Q8IY92 1834 aa20.49■□□□□ 0.87
ERGIC3-216ENST00000488384 SYNE4Q8N205 404 aa20.49■□□□□ 0.87
ERGIC3-216ENST00000488384 SH3TC1Q8TE82 1336 aa20.49■□□□□ 0.87
ERGIC3-216ENST00000488384 NPR1P16066 1061 aa20.48■□□□□ 0.87
ERGIC3-216ENST00000488384 FKBP5Q13451 457 aaPredicted RBP20.48■□□□□ 0.87
ERGIC3-216ENST00000488384 SLC10A5Q5PT55 438 aa20.48■□□□□ 0.87
ERGIC3-216ENST00000488384 CNKSR1Q969H4 720 aa20.47■□□□□ 0.87
ERGIC3-216ENST00000488384 IGKV5-2P06315 115 aa20.46■□□□□ 0.87
ERGIC3-216ENST00000488384 PRPF40BQ6NWY9 871 aaKnown RBP20.46■□□□□ 0.87
ERGIC3-216ENST00000488384 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
ERGIC3-216ENST00000488384 ARHGAP27Q6ZUM4 889 aa20.45■□□□□ 0.86
ERGIC3-216ENST00000488384 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
ERGIC3-216ENST00000488384 FAM89AQ96GI7 184 aa20.45■□□□□ 0.86
ERGIC3-216ENST00000488384 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
ERGIC3-216ENST00000488384 HOXA10P31260 410 aaPredicted RBP20.44■□□□□ 0.86
ERGIC3-216ENST00000488384 MRPL50Q8N5N7 158 aaKnown RBP20.44■□□□□ 0.86
ERGIC3-216ENST00000488384 DNAAF4Q8WXU2 420 aa20.44■□□□□ 0.86
ERGIC3-216ENST00000488384 SSH1Q8WYL5 1049 aa20.44■□□□□ 0.86
ERGIC3-216ENST00000488384 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
ERGIC3-216ENST00000488384 CWC25Q9NXE8 425 aaPredicted RBP20.44■□□□□ 0.86
ERGIC3-216ENST00000488384 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
ERGIC3-216ENST00000488384 CWF19L2Q2TBE0 894 aaKnown RBP20.43■□□□□ 0.86
ERGIC3-216ENST00000488384 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
ERGIC3-216ENST00000488384 RPGRQ92834 1020 aaKnown RBP20.43■□□□□ 0.86
ERGIC3-216ENST00000488384 FER1L6Q2WGJ9 1857 aa20.42■□□□□ 0.86
ERGIC3-216ENST00000488384 NEURL1BA8MQ27 555 aa20.42■□□□□ 0.86
ERGIC3-216ENST00000488384 F6X3S4 739 aa20.42■□□□□ 0.86
ERGIC3-216ENST00000488384 C21orf2O43822 256 aa20.42■□□□□ 0.86
ERGIC3-216ENST00000488384 CT47B1P0C2W7 299 aaPredicted RBP20.42■□□□□ 0.86
ERGIC3-216ENST00000488384 ZBTB38Q8NAP3 1195 aaPredicted RBP20.42■□□□□ 0.86
ERGIC3-216ENST00000488384 BCL2L13Q9BXK5 485 aa20.42■□□□□ 0.86
ERGIC3-216ENST00000488384 ZNF219Q9P2Y4 722 aaPredicted RBP20.42■□□□□ 0.86
ERGIC3-216ENST00000488384 IRS4O14654 1257 aaPredicted RBP20.41■□□□□ 0.86
ERGIC3-216ENST00000488384 PCCAP05165 728 aaPredicted RBP20.41■□□□□ 0.86
ERGIC3-216ENST00000488384 ALDH1L2Q3SY69 923 aa20.41■□□□□ 0.86
ERGIC3-216ENST00000488384 C7orf43Q8WVR3 580 aa20.41■□□□□ 0.86
ERGIC3-216ENST00000488384 NFKBIEO00221 500 aa20.4■□□□□ 0.86
ERGIC3-216ENST00000488384 ALDH1B1P30837 517 aa20.4■□□□□ 0.86
ERGIC3-216ENST00000488384 RASSF7Q02833 373 aa20.4■□□□□ 0.86
ERGIC3-216ENST00000488384 CCDC88AQ3V6T2 1871 aa20.4■□□□□ 0.86
ERGIC3-216ENST00000488384 ZNF526Q8TF50 670 aaPredicted RBP20.4■□□□□ 0.86
ERGIC3-216ENST00000488384 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
ERGIC3-216ENST00000488384 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.86
ERGIC3-216ENST00000488384 SNED1Q8TER0 1413 aa20.39■□□□□ 0.85
ERGIC3-216ENST00000488384 ABCC4O15439 1325 aa20.39■□□□□ 0.85
ERGIC3-216ENST00000488384 LINS1Q8NG48 757 aa20.39■□□□□ 0.85
ERGIC3-216ENST00000488384 JARID2Q92833 1246 aaPredicted RBP20.39■□□□□ 0.85
ERGIC3-216ENST00000488384 RBM17Q96I25 401 aaKnown RBP20.39■□□□□ 0.85
ERGIC3-216ENST00000488384 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.85
ERGIC3-216ENST00000488384 COL4A1P02462 1669 aa20.38■□□□□ 0.85
ERGIC3-216ENST00000488384 CDHR2Q9BYE9 1310 aa20.38■□□□□ 0.85
ERGIC3-216ENST00000488384 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
ERGIC3-216ENST00000488384 OLFM4Q6UX06 510 aa20.38■□□□□ 0.85
ERGIC3-216ENST00000488384 GPBP1L1Q9HC44 474 aaPredicted RBP20.38■□□□□ 0.85
ERGIC3-216ENST00000488384 PTPRCP08575 1304 aa20.37■□□□□ 0.85
ERGIC3-216ENST00000488384 KIF3CO14782 793 aa20.37■□□□□ 0.85
ERGIC3-216ENST00000488384 PRELPP51888 382 aa20.37■□□□□ 0.85
ERGIC3-216ENST00000488384 GCKRQ14397 625 aa20.37■□□□□ 0.85
ERGIC3-216ENST00000488384 SF3B3Q15393 1217 aaKnown RBP20.37■□□□□ 0.85
ERGIC3-216ENST00000488384 SOGA3Q5TF21 947 aa20.37■□□□□ 0.85
ERGIC3-216ENST00000488384 SLC51AQ86UW1 340 aa20.37■□□□□ 0.85
ERGIC3-216ENST00000488384 TAF1P21675 1872 aa20.37■□□□□ 0.85
ERGIC3-216ENST00000488384 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
ERGIC3-216ENST00000488384 LTBP3Q9NS15 1303 aa20.35■□□□□ 0.85
ERGIC3-216ENST00000488384 H7C1W4 665 aa20.35■□□□□ 0.85
ERGIC3-216ENST00000488384 PPEF1O14829 653 aaPredicted RBP20.35■□□□□ 0.85
ERGIC3-216ENST00000488384 C9orf131Q5VYM1 1079 aa20.35■□□□□ 0.85
ERGIC3-216ENST00000488384 UBE3BQ7Z3V4 1068 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms