RNA–Protein interactions for RNA: ENST00000488253.5

PLSCR1-215, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-215ENST00000488253 PROSER3Q2NL68 480 aa17.27■□□□□ 0.36
PLSCR1-215ENST00000488253 SUSD4Q5VX71 490 aa17.27■□□□□ 0.36
PLSCR1-215ENST00000488253 COPS6Q7L5N1 327 aa17.27■□□□□ 0.36
PLSCR1-215ENST00000488253 ZNF34Q8IZ26 560 aa17.27■□□□□ 0.36
PLSCR1-215ENST00000488253 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
PLSCR1-215ENST00000488253 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
PLSCR1-215ENST00000488253 GNAI1P63096 354 aa17.26■□□□□ 0.35
PLSCR1-215ENST00000488253 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
PLSCR1-215ENST00000488253 XAGE3Q8WTP9 111 aa17.26■□□□□ 0.35
PLSCR1-215ENST00000488253 ABCC12Q96J65 1359 aa17.26■□□□□ 0.35
PLSCR1-215ENST00000488253 PRELPP51888 382 aa17.25■□□□□ 0.35
PLSCR1-215ENST00000488253 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
PLSCR1-215ENST00000488253 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
PLSCR1-215ENST00000488253 UTP14AQ9BVJ6 771 aaKnown RBP17.25■□□□□ 0.35
PLSCR1-215ENST00000488253 TMX4Q9H1E5 349 aaPredicted RBP17.25■□□□□ 0.35
PLSCR1-215ENST00000488253 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
PLSCR1-215ENST00000488253 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
PLSCR1-215ENST00000488253 DICER1Q9UPY3 1922 aaKnown RBP17.24■□□□□ 0.35
PLSCR1-215ENST00000488253 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
PLSCR1-215ENST00000488253 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
PLSCR1-215ENST00000488253 MBIPQ9NS73 344 aa17.24■□□□□ 0.35
PLSCR1-215ENST00000488253 IFT57Q9NWB7 429 aa17.24■□□□□ 0.35
PLSCR1-215ENST00000488253 RIC1Q4ADV7 1423 aa17.23■□□□□ 0.35
PLSCR1-215ENST00000488253 NTSR2O95665 410 aa17.23■□□□□ 0.35
PLSCR1-215ENST00000488253 VEGFAP15692 232 aaPredicted RBP17.23■□□□□ 0.35
PLSCR1-215ENST00000488253 FKBP4Q02790 459 aaKnown RBP eCLIP17.23■□□□□ 0.35
PLSCR1-215ENST00000488253 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
PLSCR1-215ENST00000488253 LRP10Q7Z4F1 713 aa17.23■□□□□ 0.35
PLSCR1-215ENST00000488253 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
PLSCR1-215ENST00000488253 RNF123Q5XPI4 1314 aa17.22■□□□□ 0.35
PLSCR1-215ENST00000488253 CRY2Q49AN0 593 aa17.22■□□□□ 0.35
PLSCR1-215ENST00000488253 CHMP4AQ9BY43 222 aa17.22■□□□□ 0.35
PLSCR1-215ENST00000488253 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
PLSCR1-215ENST00000488253 HYPKQ9NX55 129 aa17.22■□□□□ 0.35
PLSCR1-215ENST00000488253 APLP1P51693 650 aa17.21■□□□□ 0.35
PLSCR1-215ENST00000488253 FSTL1Q12841 308 aa17.21■□□□□ 0.35
PLSCR1-215ENST00000488253 TCIRG1Q13488 830 aa17.21■□□□□ 0.35
PLSCR1-215ENST00000488253 CC2D2BQ6DHV5 1058 aa17.21■□□□□ 0.35
PLSCR1-215ENST00000488253 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
PLSCR1-215ENST00000488253 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
PLSCR1-215ENST00000488253 SMC1BQ8NDV3 1235 aa17.2■□□□□ 0.34
PLSCR1-215ENST00000488253 PLBD2Q8NHP8 589 aa17.2■□□□□ 0.34
PLSCR1-215ENST00000488253 TRMT112Q9UI30 125 aaKnown RBP17.2■□□□□ 0.34
PLSCR1-215ENST00000488253 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 PPEF1O14829 653 aaPredicted RBP17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 ZNF853P0CG23 659 aa17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 HOXA10P31260 410 aaPredicted RBP17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 NLRP10Q86W26 655 aa17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 CRAMP1Q96RY5 1269 aa17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 ZNF277Q9NRM2 450 aaPredicted RBP17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 SH3TC1Q8TE82 1336 aa17.19■□□□□ 0.34
PLSCR1-215ENST00000488253 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
PLSCR1-215ENST00000488253 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
PLSCR1-215ENST00000488253 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
PLSCR1-215ENST00000488253 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
PLSCR1-215ENST00000488253 SYNE4Q8N205 404 aa17.18■□□□□ 0.34
PLSCR1-215ENST00000488253 IARSP41252 1262 aaKnown RBP17.17■□□□□ 0.34
PLSCR1-215ENST00000488253 SLC10A5Q5PT55 438 aa17.17■□□□□ 0.34
PLSCR1-215ENST00000488253 RIC3Q7Z5B4 369 aa17.17■□□□□ 0.34
PLSCR1-215ENST00000488253 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
PLSCR1-215ENST00000488253 WDR90Q96KV7 1748 aa17.17■□□□□ 0.34
PLSCR1-215ENST00000488253 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
PLSCR1-215ENST00000488253 CCDC30Q5VVM6 783 aa17.16■□□□□ 0.34
PLSCR1-215ENST00000488253 PSMD1Q99460 953 aa17.16■□□□□ 0.34
PLSCR1-215ENST00000488253 IQCA1LA6NCM1 817 aa17.15■□□□□ 0.34
PLSCR1-215ENST00000488253 HCLS1P14317 486 aaPredicted RBP17.15■□□□□ 0.34
PLSCR1-215ENST00000488253 DDX46Q7L014 1031 aaKnown RBP17.15■□□□□ 0.34
PLSCR1-215ENST00000488253 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
PLSCR1-215ENST00000488253 DDX58O95786 925 aaKnown RBP17.14■□□□□ 0.33
PLSCR1-215ENST00000488253 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
PLSCR1-215ENST00000488253 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
PLSCR1-215ENST00000488253 ABCC4O15439 1325 aa17.14■□□□□ 0.33
PLSCR1-215ENST00000488253 EIF6P56537 245 aaKnown RBP17.13■□□□□ 0.33
PLSCR1-215ENST00000488253 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
PLSCR1-215ENST00000488253 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
PLSCR1-215ENST00000488253 STK31Q9BXU1 1019 aa17.13■□□□□ 0.33
PLSCR1-215ENST00000488253 BBOX1O75936 387 aa17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 HSP90B1P14625 803 aaKnown RBP17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 ISCA1Q9BUE6 129 aa17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 PHAXQ9H814 394 aaKnown RBP17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 ATP6V0A2Q9Y487 856 aa17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 LAMB2P55268 1798 aa17.12■□□□□ 0.33
PLSCR1-215ENST00000488253 FAM89AQ96GI7 184 aa17.11■□□□□ 0.33
PLSCR1-215ENST00000488253 POTECB2RU33 542 aa17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 GRAPQ13588 217 aa17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 DPP8Q6V1X1 898 aaPredicted RBP17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 TMC4Q7Z404 712 aa17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 NIM1KQ8IY84 436 aa17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 MYD88Q99836 296 aa17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 ZNF541Q9H0D2 1346 aa17.1■□□□□ 0.33
PLSCR1-215ENST00000488253 SCN4AP35499 1836 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms