RNA–Protein interactions for RNA: ENST00000488215.5

RERE-214, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-214ENST00000488215 ELL2O00472 640 aaPredicted RBP12.67□□□□□ -0.38
RERE-214ENST00000488215 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
RERE-214ENST00000488215 ZNF428Q96B54 188 aa12.67□□□□□ -0.38
RERE-214ENST00000488215 UTP14AQ9BVJ6 771 aaKnown RBP12.67□□□□□ -0.38
RERE-214ENST00000488215 LTBP3Q9NS15 1303 aa12.66□□□□□ -0.38
RERE-214ENST00000488215 CRY2Q49AN0 593 aa12.66□□□□□ -0.38
RERE-214ENST00000488215 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
RERE-214ENST00000488215 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
RERE-214ENST00000488215 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
RERE-214ENST00000488215 ALDH1B1P30837 517 aa12.65□□□□□ -0.38
RERE-214ENST00000488215 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
RERE-214ENST00000488215 NLRP10Q86W26 655 aa12.65□□□□□ -0.38
RERE-214ENST00000488215 PLBD2Q8NHP8 589 aa12.65□□□□□ -0.38
RERE-214ENST00000488215 HYPKQ9NX55 129 aa12.65□□□□□ -0.38
RERE-214ENST00000488215 SALL2Q9Y467 1007 aaPredicted RBP12.65□□□□□ -0.38
RERE-214ENST00000488215 RNF123Q5XPI4 1314 aa12.64□□□□□ -0.39
RERE-214ENST00000488215 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
RERE-214ENST00000488215 TCIRG1Q13488 830 aa12.64□□□□□ -0.39
RERE-214ENST00000488215 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
RERE-214ENST00000488215 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
RERE-214ENST00000488215 C8orf58Q8NAV2 365 aa12.64□□□□□ -0.39
RERE-214ENST00000488215 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
RERE-214ENST00000488215 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
RERE-214ENST00000488215 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
RERE-214ENST00000488215 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
RERE-214ENST00000488215 WDR90Q96KV7 1748 aa12.63□□□□□ -0.39
RERE-214ENST00000488215 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
RERE-214ENST00000488215 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
RERE-214ENST00000488215 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
RERE-214ENST00000488215 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
RERE-214ENST00000488215 TOMM70O94826 608 aa12.63□□□□□ -0.39
RERE-214ENST00000488215 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
RERE-214ENST00000488215 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
RERE-214ENST00000488215 FAM9BQ8IZU0 186 aa12.63□□□□□ -0.39
RERE-214ENST00000488215 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
RERE-214ENST00000488215 RBM17Q96I25 401 aaKnown RBP12.63□□□□□ -0.39
RERE-214ENST00000488215 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
RERE-214ENST00000488215 HSPA6P17066 643 aa12.62□□□□□ -0.39
RERE-214ENST00000488215 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
RERE-214ENST00000488215 SLC51AQ86UW1 340 aa12.62□□□□□ -0.39
RERE-214ENST00000488215 SYNE4Q8N205 404 aa12.62□□□□□ -0.39
RERE-214ENST00000488215 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
RERE-214ENST00000488215 PHAXQ9H814 394 aaKnown RBP12.62□□□□□ -0.39
RERE-214ENST00000488215 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
RERE-214ENST00000488215 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
RERE-214ENST00000488215 HOXA10P31260 410 aaPredicted RBP12.61□□□□□ -0.39
RERE-214ENST00000488215 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
RERE-214ENST00000488215 CCDC30Q5VVM6 783 aa12.61□□□□□ -0.39
RERE-214ENST00000488215 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
RERE-214ENST00000488215 RTKN2Q8IZC4 609 aa12.61□□□□□ -0.39
RERE-214ENST00000488215 CRAMP1Q96RY5 1269 aa12.61□□□□□ -0.39
RERE-214ENST00000488215 ABCC4O15439 1325 aa12.61□□□□□ -0.39
RERE-214ENST00000488215 IL16Q14005 1332 aa12.61□□□□□ -0.39
RERE-214ENST00000488215 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
RERE-214ENST00000488215 TWISTNBQ3B726 338 aaPredicted RBP12.6□□□□□ -0.39
RERE-214ENST00000488215 ISCA1Q9BUE6 129 aa12.6□□□□□ -0.39
RERE-214ENST00000488215 STK31Q9BXU1 1019 aa12.6□□□□□ -0.39
RERE-214ENST00000488215 TMX4Q9H1E5 349 aaPredicted RBP12.6□□□□□ -0.39
RERE-214ENST00000488215 TAF1P21675 1872 aa12.59□□□□□ -0.39
RERE-214ENST00000488215 DDX58O95786 925 aaKnown RBP12.59□□□□□ -0.39
RERE-214ENST00000488215 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
RERE-214ENST00000488215 SLC10A5Q5PT55 438 aa12.59□□□□□ -0.39
RERE-214ENST00000488215 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
RERE-214ENST00000488215 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
RERE-214ENST00000488215 FAM89AQ96GI7 184 aa12.59□□□□□ -0.39
RERE-214ENST00000488215 MYD88Q99836 296 aa12.59□□□□□ -0.39
RERE-214ENST00000488215 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
RERE-214ENST00000488215 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
RERE-214ENST00000488215 ZNF541Q9H0D2 1346 aa12.59□□□□□ -0.39
RERE-214ENST00000488215 COL4A5P29400 1685 aa12.58□□□□□ -0.4
RERE-214ENST00000488215 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
RERE-214ENST00000488215 VEGFAP15692 232 aaPredicted RBP12.58□□□□□ -0.4
RERE-214ENST00000488215 DDX46Q7L014 1031 aaKnown RBP12.58□□□□□ -0.4
RERE-214ENST00000488215 PSMD1Q99460 953 aa12.58□□□□□ -0.4
RERE-214ENST00000488215 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
RERE-214ENST00000488215 SMC1BQ8NDV3 1235 aa12.57□□□□□ -0.4
RERE-214ENST00000488215 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
RERE-214ENST00000488215 COL4A1P02462 1669 aa12.57□□□□□ -0.4
RERE-214ENST00000488215 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
RERE-214ENST00000488215 FSTL1Q12841 308 aa12.56□□□□□ -0.4
RERE-214ENST00000488215 GRAPQ13588 217 aa12.56□□□□□ -0.4
RERE-214ENST00000488215 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
RERE-214ENST00000488215 LARGE2Q8N3Y3 721 aa12.56□□□□□ -0.4
RERE-214ENST00000488215 GRAPLQ8TC17 118 aaPredicted RBP12.56□□□□□ -0.4
RERE-214ENST00000488215 MAP3K2Q9Y2U5 619 aa12.56□□□□□ -0.4
RERE-214ENST00000488215 ATP6V0A2Q9Y487 856 aa12.56□□□□□ -0.4
RERE-214ENST00000488215 DUOX1Q9NRD9 1551 aa12.56□□□□□ -0.4
RERE-214ENST00000488215 SCN4AP35499 1836 aa12.55□□□□□ -0.4
RERE-214ENST00000488215 PPIP5K2O43314 1243 aa12.55□□□□□ -0.4
RERE-214ENST00000488215 APLP1P51693 650 aa12.55□□□□□ -0.4
RERE-214ENST00000488215 GRIPAP1Q4V328 841 aa12.55□□□□□ -0.4
RERE-214ENST00000488215 METTL22Q9BUU2 404 aaPredicted RBP12.55□□□□□ -0.4
RERE-214ENST00000488215 CWC25Q9NXE8 425 aaPredicted RBP12.55□□□□□ -0.4
RERE-214ENST00000488215 SPEF2Q9C093 1822 aa12.54□□□□□ -0.4
RERE-214ENST00000488215 PI4KAP2A4QPH2 592 aa12.54□□□□□ -0.4
RERE-214ENST00000488215 IQCA1LA6NCM1 817 aa12.54□□□□□ -0.4
RERE-214ENST00000488215 POTECB2RU33 542 aa12.54□□□□□ -0.4
RERE-214ENST00000488215 SLC4A2P04920 1241 aa12.54□□□□□ -0.4
RERE-214ENST00000488215 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
RERE-214ENST00000488215 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms