RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 SLC27A2O14975 620 aa19.49■□□□□ 0.71
GCOM1-210ENST00000488175 LRRC59Q96AG4 307 aaKnown RBP19.49■□□□□ 0.71
GCOM1-210ENST00000488175 TLR7Q9NYK1 1049 aaKnown RBP19.49■□□□□ 0.71
GCOM1-210ENST00000488175 TBX22Q9Y458 520 aa19.49■□□□□ 0.71
GCOM1-210ENST00000488175 GTF2F1P35269 517 aaKnown RBP eCLIP19.49■□□□□ 0.71
GCOM1-210ENST00000488175 STK3Q13188 491 aa19.49■□□□□ 0.71
GCOM1-210ENST00000488175 MAP4K1Q92918 833 aa19.49■□□□□ 0.71
GCOM1-210ENST00000488175 BOLA2Q9H3K6 86 aa19.49■□□□□ 0.71
GCOM1-210ENST00000488175 DBF4Q9UBU7 674 aaPredicted RBP19.49■□□□□ 0.71
GCOM1-210ENST00000488175 SASH1O94885 1247 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 HOXB7P09629 217 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 MAP3K11Q16584 847 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 ZNF530Q6P9A1 599 aaPredicted RBP19.48■□□□□ 0.71
GCOM1-210ENST00000488175 SIL1Q9H173 461 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 NUP62CLQ9H1M0 184 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 PRDM4Q9UKN5 801 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 A0A0D9SFI3 127 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 MRVI1Q9Y6F6 885 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 DIP2AQ14689 1571 aa19.48■□□□□ 0.71
GCOM1-210ENST00000488175 PTGS1P23219 599 aa19.47■□□□□ 0.71
GCOM1-210ENST00000488175 TYRO3Q06418 890 aa19.47■□□□□ 0.71
GCOM1-210ENST00000488175 FAM200AQ8TCP9 573 aa19.47■□□□□ 0.71
GCOM1-210ENST00000488175 DACT1Q9NYF0 836 aa19.47■□□□□ 0.71
GCOM1-210ENST00000488175 RGPD8O14715 1765 aaPredicted RBP19.47■□□□□ 0.71
GCOM1-210ENST00000488175 KCNA6P17658 529 aa19.47■□□□□ 0.71
GCOM1-210ENST00000488175 BCL2L12Q9HB09 334 aa19.47■□□□□ 0.71
GCOM1-210ENST00000488175 AIMP1Q12904 312 aaKnown RBP19.46■□□□□ 0.71
GCOM1-210ENST00000488175 LARP1Q6PKG0 1096 aaKnown RBP19.46■□□□□ 0.71
GCOM1-210ENST00000488175 ERC1Q8IUD2 1116 aa19.46■□□□□ 0.71
GCOM1-210ENST00000488175 KLHDC4Q8TBB5 520 aa19.46■□□□□ 0.71
GCOM1-210ENST00000488175 SUCLG2Q96I99 432 aa19.46■□□□□ 0.71
GCOM1-210ENST00000488175 BLOC1S2Q6QNY1 142 aa19.46■□□□□ 0.71
GCOM1-210ENST00000488175 KSR2Q6VAB6 950 aa19.46■□□□□ 0.71
GCOM1-210ENST00000488175 IP6K1Q92551 441 aa19.46■□□□□ 0.71
GCOM1-210ENST00000488175 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
GCOM1-210ENST00000488175 FSD1Q9BTV5 496 aa19.46■□□□□ 0.71
GCOM1-210ENST00000488175 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
GCOM1-210ENST00000488175 RIOK3O14730 519 aaKnown RBP19.45■□□□□ 0.7
GCOM1-210ENST00000488175 RBM33Q96EV2 1170 aaKnown RBP19.45■□□□□ 0.7
GCOM1-210ENST00000488175 TNMDQ9H2S6 317 aa19.45■□□□□ 0.7
GCOM1-210ENST00000488175 BICC1Q9H694 974 aaKnown RBP19.45■□□□□ 0.7
GCOM1-210ENST00000488175 PSMA5P28066 241 aa19.45■□□□□ 0.7
GCOM1-210ENST00000488175 G3BP1Q13283 466 aaKnown RBP eCLIP19.45■□□□□ 0.7
GCOM1-210ENST00000488175 ANO6Q4KMQ2 910 aa19.45■□□□□ 0.7
GCOM1-210ENST00000488175 CACNA1FO60840 1977 aa19.45■□□□□ 0.7
GCOM1-210ENST00000488175 GOLGA6L6A8MZA4 724 aa19.44■□□□□ 0.7
GCOM1-210ENST00000488175 ALDH1L1O75891 902 aa19.44■□□□□ 0.7
GCOM1-210ENST00000488175 CBX1P83916 185 aa19.44■□□□□ 0.7
GCOM1-210ENST00000488175 EDC3Q96F86 508 aaKnown RBP19.44■□□□□ 0.7
GCOM1-210ENST00000488175 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
GCOM1-210ENST00000488175 ZNF589Q86UQ0 364 aaPredicted RBP19.44■□□□□ 0.7
GCOM1-210ENST00000488175 SMAP1Q8IYB5 467 aaPredicted RBP19.44■□□□□ 0.7
GCOM1-210ENST00000488175 SPATA32Q96LK8 384 aa19.44■□□□□ 0.7
GCOM1-210ENST00000488175 GIGYF1O75420 1035 aaPredicted RBP19.43■□□□□ 0.7
GCOM1-210ENST00000488175 LRMPQ12912 555 aa19.43■□□□□ 0.7
GCOM1-210ENST00000488175 TOB2Q14106 344 aaPredicted RBP19.43■□□□□ 0.7
GCOM1-210ENST00000488175 CCDC186Q7Z3E2 898 aa19.43■□□□□ 0.7
GCOM1-210ENST00000488175 CBX8Q9HC52 389 aa19.43■□□□□ 0.7
GCOM1-210ENST00000488175 NRBP1Q9UHY1 535 aa19.43■□□□□ 0.7
GCOM1-210ENST00000488175 AKAP4Q5JQC9 854 aa19.43■□□□□ 0.7
GCOM1-210ENST00000488175 DRC7Q8IY82 874 aa19.43■□□□□ 0.7
GCOM1-210ENST00000488175 N4BP2Q86UW6 1770 aaPredicted RBP19.43■□□□□ 0.7
GCOM1-210ENST00000488175 GRM8O00222 908 aa19.42■□□□□ 0.7
GCOM1-210ENST00000488175 TPM3P06753 285 aa19.42■□□□□ 0.7
GCOM1-210ENST00000488175 PDCP20941 246 aa19.42■□□□□ 0.7
GCOM1-210ENST00000488175 RPS6KB1P23443 525 aa19.42■□□□□ 0.7
GCOM1-210ENST00000488175 CHMP4AQ9BY43 222 aa19.42■□□□□ 0.7
GCOM1-210ENST00000488175 CHAF1AQ13111 956 aaPredicted RBP19.42■□□□□ 0.7
GCOM1-210ENST00000488175 ELP1O95163 1332 aa19.42■□□□□ 0.7
GCOM1-210ENST00000488175 JAK2O60674 1132 aa19.41■□□□□ 0.7
GCOM1-210ENST00000488175 ATP2B3Q16720 1220 aa19.41■□□□□ 0.7
GCOM1-210ENST00000488175 LEO1Q8WVC0 666 aaPredicted RBP19.41■□□□□ 0.7
GCOM1-210ENST00000488175 DDX11Q96FC9 970 aa19.41■□□□□ 0.7
GCOM1-210ENST00000488175 HIP1O00291 1037 aa19.41■□□□□ 0.7
GCOM1-210ENST00000488175 NR1I2O75469 434 aa19.41■□□□□ 0.7
GCOM1-210ENST00000488175 RNF20Q5VTR2 975 aa19.41■□□□□ 0.7
GCOM1-210ENST00000488175 RNMTO43148 476 aaKnown RBP19.4■□□□□ 0.7
GCOM1-210ENST00000488175 TRIM5Q9C035 493 aa19.4■□□□□ 0.7
GCOM1-210ENST00000488175 SCAND2PQ9GZW5 306 aaPredicted RBP19.4■□□□□ 0.7
GCOM1-210ENST00000488175 NDUFB9Q9Y6M9 179 aa19.4■□□□□ 0.7
GCOM1-210ENST00000488175 CRYBG1Q9Y4K1 1723 aa19.4■□□□□ 0.7
GCOM1-210ENST00000488175 CHGBP05060 677 aa19.4■□□□□ 0.7
GCOM1-210ENST00000488175 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
GCOM1-210ENST00000488175 ANKRD1Q15327 319 aa19.39■□□□□ 0.7
GCOM1-210ENST00000488175 LINS1Q8NG48 757 aa19.39■□□□□ 0.7
GCOM1-210ENST00000488175 BICD2Q8TD16 824 aa19.39■□□□□ 0.7
GCOM1-210ENST00000488175 PHF8Q9UPP1 1060 aa19.39■□□□□ 0.7
GCOM1-210ENST00000488175 NPHP4O75161 1426 aaPredicted RBP19.39■□□□□ 0.69
GCOM1-210ENST00000488175 C1orf141Q5JVX7 400 aa19.39■□□□□ 0.69
GCOM1-210ENST00000488175 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
GCOM1-210ENST00000488175 PGBD1Q96JS3 809 aa19.39■□□□□ 0.69
GCOM1-210ENST00000488175 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.38■□□□□ 0.69
GCOM1-210ENST00000488175 DNAJC25Q9H1X3 360 aa19.38■□□□□ 0.69
GCOM1-210ENST00000488175 SPDYE4A6NLX3 237 aa19.38■□□□□ 0.69
GCOM1-210ENST00000488175 C16orf45Q96MC5 204 aaPredicted RBP19.38■□□□□ 0.69
GCOM1-210ENST00000488175 NPHP3Q7Z494 1330 aa19.38■□□□□ 0.69
GCOM1-210ENST00000488175 CEBPZQ03701 1054 aaKnown RBP19.38■□□□□ 0.69
GCOM1-210ENST00000488175 PDCL2Q8N4E4 241 aa19.38■□□□□ 0.69
GCOM1-210ENST00000488175 CLSTN2Q9H4D0 955 aa19.37■□□□□ 0.69
GCOM1-210ENST00000488175 SNRKQ9NRH2 765 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms