RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 RIMBP3CA6NJZ7 1639 aa13.71□□□□□ -0.21
LDLRAP1-207ENST00000488127 RIMBP3BA6NNM3 1639 aa13.71□□□□□ -0.21
LDLRAP1-207ENST00000488127 RIMBP3Q9UFD9 1639 aa13.71□□□□□ -0.21
LDLRAP1-207ENST00000488127 HAND2P61296 217 aa13.71□□□□□ -0.21
LDLRAP1-207ENST00000488127 ATP8B2P98198 1209 aa13.71□□□□□ -0.21
LDLRAP1-207ENST00000488127 F8W031 263 aaPredicted RBP13.71□□□□□ -0.22
LDLRAP1-207ENST00000488127 TRIM22Q8IYM9 498 aa13.71□□□□□ -0.22
LDLRAP1-207ENST00000488127 PDCP20941 246 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 BRINP3Q76B58 766 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 A2ML1A8K2U0 1454 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 RANBP6O60518 1105 aaKnown RBP13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 JAG2Q9Y219 1238 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 SYCE3A1L190 88 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 CLCN1P35523 988 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 KLHDC4Q8TBB5 520 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 LARP1BQ659C4 914 aaKnown RBP13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
LDLRAP1-207ENST00000488127 ANKRD1Q15327 319 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 NAT10Q9H0A0 1025 aaKnown RBP13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 PHKG2P15735 406 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 RUFY1Q96T51 708 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 CCDC192P0DO97 292 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 KRT32Q14532 448 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 BICC1Q9H694 974 aaKnown RBP13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 ARHGAP31Q2M1Z3 1444 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 PPFIA3O75145 1194 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 APBA3O96018 575 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 MYOM2P54296 1465 aa13.69□□□□□ -0.22
LDLRAP1-207ENST00000488127 TBC1D9Q6ZT07 1266 aa13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 PDILTQ8N807 584 aa13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 EVI5LQ96CN4 794 aa13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 USP19O94966 1318 aa13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 CEP85Q6P2H3 762 aa13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 SKIDA1Q1XH10 827 aa13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 TAF3Q5VWG9 929 aa13.68□□□□□ -0.22
LDLRAP1-207ENST00000488127 INSRP06213 1382 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 USP6P35125 1406 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 ZNF213O14771 459 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 SMC2O95347 1197 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 KCNQ4P56696 695 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 HDAC1Q13547 482 aaPredicted RBP13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 FERMT3Q86UX7 667 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 CGNQ9P2M7 1197 aaKnown RBP13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 IL15P40933 162 aaPredicted RBP13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 PDE1AP54750 535 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 STK38Q15208 465 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 NBPF14Q5TI25 921 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 CCDC83Q8IWF9 413 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
LDLRAP1-207ENST00000488127 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 SDSP20132 328 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 KINO60870 393 aaKnown RBP13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 NUCB1Q02818 461 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 CCDC47Q96A33 483 aaKnown RBP13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 PANK2Q9BZ23 570 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 CDC42BPBQ9Y5S2 1711 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 KIF1BO60333 1816 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 RIMBP2O15034 1052 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 TTC22Q5TAA0 569 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 RAB11FIP4Q86YS3 637 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 PLBD2Q8NHP8 589 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 CCDC87Q9NVE4 849 aa13.66□□□□□ -0.22
LDLRAP1-207ENST00000488127 NBPF7P0C2Y1 421 aaPredicted RBP13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 MAP3K4Q9Y6R4 1608 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 TIMM10P62072 90 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 CNBD1Q8NA66 436 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 ZNF594Q96JF6 807 aaPredicted RBP13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 NYXQ9GZU5 481 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 HOOK1Q9UJC3 728 aaKnown RBP13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 TFCP2Q12800 502 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 SOGA3Q5TF21 947 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 TTLL5Q6EMB2 1281 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 ZNF444Q8N0Y2 327 aaPredicted RBP13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 TNPO1Q92973 898 aaKnown RBP13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 CEP89Q96ST8 783 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 SH3TC1Q8TE82 1336 aa13.65□□□□□ -0.22
LDLRAP1-207ENST00000488127 METTL22Q9BUU2 404 aaPredicted RBP13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 TET3O43151 1660 aa13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 RDXP35241 583 aaKnown RBP13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 ZBTB7BO15156 539 aaPredicted RBP13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 ERCC4Q92889 916 aaPredicted RBP13.64□□□□□ -0.23
LDLRAP1-207ENST00000488127 TTLL12Q14166 644 aaPredicted RBP13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms