RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 WDR17Q8IZU2 1322 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 CD2BP2O95400 341 aaKnown RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 NMIQ13287 307 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 ZSCAN25Q6NSZ9 544 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 CLEC17AQ6ZS10 378 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 UBE3BQ7Z3V4 1068 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 PI4K2BQ8TCG2 481 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 UPF3BQ9BZI7 483 aaKnown RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 AXIN2Q9Y2T1 843 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 SNX14Q9Y5W7 946 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 N4BP2Q86UW6 1770 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 TRPM3Q9HCF6 1732 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 CCDC171Q6TFL3 1326 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 SALL3Q9BXA9 1300 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 VPS37CA5D8V6 355 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 IL15P40933 162 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 PROSER3Q2NL68 480 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 ZNF496Q96IT1 587 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 NAP1L5Q96NT1 182 aaPredicted RBP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 TM6SF1Q9BZW5 370 aa3.16□□□□□ -1.9
C9orf72-205ENST00000488117 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.16□□□□□ -1.9
C9orf72-205ENST00000488117 RFX7Q2KHR2 1363 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 ZSCAN22P10073 491 aaPredicted RBP3.15□□□□□ -1.9
C9orf72-205ENST00000488117 ZRSR1Q15695 479 aaKnown RBP3.15□□□□□ -1.9
C9orf72-205ENST00000488117 ZSCAN23Q3MJ62 389 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 TNNI3KQ59H18 835 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 RUFY3Q7L099 469 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 ZGPATQ8N5A5 531 aaKnown RBP3.15□□□□□ -1.9
C9orf72-205ENST00000488117 LSG1Q9H089 658 aaKnown RBP3.15□□□□□ -1.9
C9orf72-205ENST00000488117 CEP126Q9P2H0 1117 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 CCDC39Q9UFE4 941 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 CTNNA3Q9UI47 895 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 CCDC9Q9Y3X0 531 aaKnown RBP3.15□□□□□ -1.9
C9orf72-205ENST00000488117 RBM8AQ9Y5S9 174 aaKnown RBP3.15□□□□□ -1.9
C9orf72-205ENST00000488117 FPGT-TNNI3KV9GXZ4 949 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 CAMTA1Q9Y6Y1 1673 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 HEG1Q9ULI3 1381 aa3.15□□□□□ -1.9
C9orf72-205ENST00000488117 FSD2A1L4K1 749 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 ATP5J2-PTCD1G3V325 749 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 STX6O43752 255 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 PTCD1O75127 700 aaKnown RBP3.15□□□□□ -1.91
C9orf72-205ENST00000488117 XRCC6P12956 609 aaKnown RBP eCLIP3.15□□□□□ -1.91
C9orf72-205ENST00000488117 AK2P54819 239 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 TFCP2Q12800 502 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 CUL4AQ13619 759 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 TPRNQ4KMQ1 711 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 CREB3L3Q68CJ9 461 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 TICAM2Q86XR7 235 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC83Q8IWF9 413 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC191Q8NCU4 936 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 DDX17Q92841 729 aaKnown RBP3.15□□□□□ -1.91
C9orf72-205ENST00000488117 SETD1BQ9UPS6 1966 aaKnown RBP3.15□□□□□ -1.91
C9orf72-205ENST00000488117 PARP4Q9UKK3 1724 aaKnown RBP3.15□□□□□ -1.91
C9orf72-205ENST00000488117 CACNA1FO60840 1977 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 GOLGA6L6A8MZA4 724 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 ATP5JP18859 108 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 GJB2P29033 226 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 MCMDC2Q4G0Z9 681 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 CCDC183Q5T5S1 534 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 CARD10Q9BWT7 1032 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 COPRSQ9NQ92 184 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 HELLSQ9NRZ9 838 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 SLAIN2Q9P270 581 aa3.15□□□□□ -1.91
C9orf72-205ENST00000488117 PRAMEF22A3QJZ6 481 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 KDM6AO15550 1401 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 IFIT1P09914 478 aaKnown RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 ZNF445P59923 1031 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 KRT85P78386 507 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 WASHC4Q2M389 1173 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 LARP1BQ659C4 914 aaKnown RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 LRSAM1Q6UWE0 723 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 LMBR1LQ6UX01 489 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 PPP4R3CPQ6ZMV5 832 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 BRINP3Q76B58 766 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 UNC5CLQ8IV45 518 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 ZBTB3Q9H5J0 574 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 GPR108Q9NPR9 543 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 PALD1Q9ULE6 856 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 MEGF6O75095 1541 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 SLC27A2O14975 620 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 DHX16O60231 1041 aaKnown RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 BRD1O95696 1058 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 ZFYP08048 801 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 HSPA2P54652 639 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 KIAA2012Q0VF49 1180 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 IFIT5Q13325 482 aaKnown RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 FOXD4L6Q3SYB3 417 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 FOXD4L3Q6VB84 417 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 SYTL4Q96C24 671 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 CNNM1Q9NRU3 951 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 LMBRD1Q9NUN5 540 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 TBC1D2BQ9UPU7 963 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 ALS2Q96Q42 1657 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 ANKRD18BA2A2Z9 1011 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 CIAO1O76071 339 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 F13A1P00488 732 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 UBE2HP62256 183 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 TRDNQ13061 729 aa3.14□□□□□ -1.91
C9orf72-205ENST00000488117 TTF1Q15361 905 aaPredicted RBP3.14□□□□□ -1.91
C9orf72-205ENST00000488117 RALYLQ86SE5 291 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms