RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 VAMP4O75379 141 aa18.21■□□□□ 0.51
PFKFB3-213ENST00000487989 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
PFKFB3-213ENST00000487989 ATP5J2-PTCD1G3V325 749 aa18.2■□□□□ 0.5
PFKFB3-213ENST00000487989 C21orf2O43822 256 aa18.2■□□□□ 0.5
PFKFB3-213ENST00000487989 DDX58O95786 925 aaKnown RBP18.2■□□□□ 0.5
PFKFB3-213ENST00000487989 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
PFKFB3-213ENST00000487989 PRPF40BQ6NWY9 871 aaKnown RBP18.2■□□□□ 0.5
PFKFB3-213ENST00000487989 ZNF428Q96B54 188 aa18.2■□□□□ 0.5
PFKFB3-213ENST00000487989 ISCA1Q9BUE6 129 aa18.2■□□□□ 0.5
PFKFB3-213ENST00000487989 TRMT112Q9UI30 125 aaKnown RBP18.2■□□□□ 0.5
PFKFB3-213ENST00000487989 SLC10A5Q5PT55 438 aa18.19■□□□□ 0.5
PFKFB3-213ENST00000487989 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
PFKFB3-213ENST00000487989 ALDH1B1P30837 517 aa18.18■□□□□ 0.5
PFKFB3-213ENST00000487989 CRY2Q49AN0 593 aa18.18■□□□□ 0.5
PFKFB3-213ENST00000487989 RPGRQ92834 1020 aaKnown RBP18.18■□□□□ 0.5
PFKFB3-213ENST00000487989 NLRP3Q96P20 1036 aa18.18■□□□□ 0.5
PFKFB3-213ENST00000487989 ANKRD36CQ5JPF3 1778 aa18.17■□□□□ 0.5
PFKFB3-213ENST00000487989 RIC1Q4ADV7 1423 aa18.17■□□□□ 0.5
PFKFB3-213ENST00000487989 TRIM28Q13263 835 aaKnown RBP18.17■□□□□ 0.5
PFKFB3-213ENST00000487989 C9orf131Q5VYM1 1079 aa18.17■□□□□ 0.5
PFKFB3-213ENST00000487989 G2E3Q7L622 706 aa18.17■□□□□ 0.5
PFKFB3-213ENST00000487989 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
PFKFB3-213ENST00000487989 MYD88Q99836 296 aa18.17■□□□□ 0.5
PFKFB3-213ENST00000487989 SH3TC1Q8TE82 1336 aa18.17■□□□□ 0.5
PFKFB3-213ENST00000487989 TNRC6CQ9HCJ0 1690 aaKnown RBP18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 E9PSI1 815 aa18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 HCLS1P14317 486 aaPredicted RBP18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 RASSF7Q02833 373 aa18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 KSR2Q6VAB6 950 aa18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 C3orf67Q6ZVT6 689 aa18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 METTL22Q9BUU2 404 aaPredicted RBP18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 MAP3K2Q9Y2U5 619 aa18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 ADCY9O60503 1353 aa18.16■□□□□ 0.5
PFKFB3-213ENST00000487989 PI4KAP2A4QPH2 592 aa18.15■□□□□ 0.5
PFKFB3-213ENST00000487989 HOXA10P31260 410 aaPredicted RBP18.15■□□□□ 0.5
PFKFB3-213ENST00000487989 SOGA3Q5TF21 947 aa18.15■□□□□ 0.5
PFKFB3-213ENST00000487989 PI4KAP1Q8N8J0 262 aa18.15■□□□□ 0.5
PFKFB3-213ENST00000487989 FAM89AQ96GI7 184 aa18.15■□□□□ 0.5
PFKFB3-213ENST00000487989 RNF181Q9P0P0 153 aa18.15■□□□□ 0.5
PFKFB3-213ENST00000487989 ARFGEF2Q9Y6D5 1785 aa18.14■□□□□ 0.5
PFKFB3-213ENST00000487989 NFKBIEO00221 500 aa18.14■□□□□ 0.49
PFKFB3-213ENST00000487989 FLIIQ13045 1269 aa18.14■□□□□ 0.49
PFKFB3-213ENST00000487989 C7orf43Q8WVR3 580 aa18.14■□□□□ 0.49
PFKFB3-213ENST00000487989 RBM17Q96I25 401 aaKnown RBP18.14■□□□□ 0.49
PFKFB3-213ENST00000487989 SLX4Q8IY92 1834 aa18.14■□□□□ 0.49
PFKFB3-213ENST00000487989 LMNB1P20700 586 aa18.13■□□□□ 0.49
PFKFB3-213ENST00000487989 SLFN5Q08AF3 891 aa18.13■□□□□ 0.49
PFKFB3-213ENST00000487989 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
PFKFB3-213ENST00000487989 CCDC191Q8NCU4 936 aa18.13■□□□□ 0.49
PFKFB3-213ENST00000487989 ZNF526Q8TF50 670 aaPredicted RBP18.13■□□□□ 0.49
PFKFB3-213ENST00000487989 CRAMP1Q96RY5 1269 aa18.13■□□□□ 0.49
PFKFB3-213ENST00000487989 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
PFKFB3-213ENST00000487989 FKBP5Q13451 457 aaPredicted RBP18.12■□□□□ 0.49
PFKFB3-213ENST00000487989 CDCA7LQ96GN5 454 aa18.12■□□□□ 0.49
PFKFB3-213ENST00000487989 PRELPP51888 382 aa18.11■□□□□ 0.49
PFKFB3-213ENST00000487989 CCDC93Q567U6 631 aa18.11■□□□□ 0.49
PFKFB3-213ENST00000487989 OLFM4Q6UX06 510 aa18.11■□□□□ 0.49
PFKFB3-213ENST00000487989 ZBTB38Q8NAP3 1195 aaPredicted RBP18.11■□□□□ 0.49
PFKFB3-213ENST00000487989 CWC25Q9NXE8 425 aaPredicted RBP18.11■□□□□ 0.49
PFKFB3-213ENST00000487989 CACNA1SQ13698 1873 aa18.1■□□□□ 0.49
PFKFB3-213ENST00000487989 IRS4O14654 1257 aaPredicted RBP18.1■□□□□ 0.49
PFKFB3-213ENST00000487989 IGKV5-2P06315 115 aa18.1■□□□□ 0.49
PFKFB3-213ENST00000487989 TAOK3Q9H2K8 898 aa18.1■□□□□ 0.49
PFKFB3-213ENST00000487989 GPBP1L1Q9HC44 474 aaPredicted RBP18.1■□□□□ 0.49
PFKFB3-213ENST00000487989 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
PFKFB3-213ENST00000487989 PCCAP05165 728 aaPredicted RBP18.09■□□□□ 0.49
PFKFB3-213ENST00000487989 DDX46Q7L014 1031 aaKnown RBP18.09■□□□□ 0.49
PFKFB3-213ENST00000487989 RTKN2Q8IZC4 609 aa18.09■□□□□ 0.49
PFKFB3-213ENST00000487989 PPEF1O14829 653 aaPredicted RBP18.08■□□□□ 0.48
PFKFB3-213ENST00000487989 HSP90B1P14625 803 aaKnown RBP18.08■□□□□ 0.48
PFKFB3-213ENST00000487989 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.48
PFKFB3-213ENST00000487989 DNAAF4Q8WXU2 420 aa18.08■□□□□ 0.48
PFKFB3-213ENST00000487989 JARID2Q92833 1246 aaPredicted RBP18.08■□□□□ 0.48
PFKFB3-213ENST00000487989 ABCC4O15439 1325 aa18.07■□□□□ 0.48
PFKFB3-213ENST00000487989 NEURL1BA8MQ27 555 aa18.07■□□□□ 0.48
PFKFB3-213ENST00000487989 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
PFKFB3-213ENST00000487989 SF3B3Q15393 1217 aaKnown RBP18.07■□□□□ 0.48
PFKFB3-213ENST00000487989 CC2D2BQ6DHV5 1058 aa18.07■□□□□ 0.48
PFKFB3-213ENST00000487989 TRMT2AQ8IZ69 625 aaKnown RBP18.07■□□□□ 0.48
PFKFB3-213ENST00000487989 SBF1O95248 1867 aa18.06■□□□□ 0.48
PFKFB3-213ENST00000487989 FER1L6Q2WGJ9 1857 aa18.06■□□□□ 0.48
PFKFB3-213ENST00000487989 BBOX1O75936 387 aa18.06■□□□□ 0.48
PFKFB3-213ENST00000487989 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
PFKFB3-213ENST00000487989 F6X3S4 739 aa18.05■□□□□ 0.48
PFKFB3-213ENST00000487989 GRAPQ13588 217 aa18.05■□□□□ 0.48
PFKFB3-213ENST00000487989 GRAPLQ8TC17 118 aaPredicted RBP18.05■□□□□ 0.48
PFKFB3-213ENST00000487989 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
PFKFB3-213ENST00000487989 ZC3H4Q9UPT8 1303 aaKnown RBP18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 DDX60Q8IY21 1712 aaKnown RBP18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 PDE8AO60658 829 aa18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 HNRNPUQ00839 825 aaKnown RBP eCLIP18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 GRIPAP1Q4V328 841 aa18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 SLC51AQ86UW1 340 aa18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 LINS1Q8NG48 757 aa18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 ZNF277Q9NRM2 450 aaPredicted RBP18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 LAMB2P55268 1798 aa18.04■□□□□ 0.48
PFKFB3-213ENST00000487989 CDHR2Q9BYE9 1310 aa18.03■□□□□ 0.48
PFKFB3-213ENST00000487989 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
PFKFB3-213ENST00000487989 GCKRQ14397 625 aa18.03■□□□□ 0.48
PFKFB3-213ENST00000487989 MRPL50Q8N5N7 158 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms