RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 DNAJC5GQ8N7S2 189 aa14.67□□□□□ -0.06
RAB11FIP3-210ENST00000487899 NECTIN2Q92692 538 aa14.67□□□□□ -0.06
RAB11FIP3-210ENST00000487899 CHPF2Q9P2E5 772 aa14.67□□□□□ -0.06
RAB11FIP3-210ENST00000487899 POTECB2RU33 542 aa14.66□□□□□ -0.06
RAB11FIP3-210ENST00000487899 HOXB7P09629 217 aa14.66□□□□□ -0.06
RAB11FIP3-210ENST00000487899 ZNF853P0CG23 659 aa14.66□□□□□ -0.06
RAB11FIP3-210ENST00000487899 XAGE3Q8WTP9 111 aa14.66□□□□□ -0.06
RAB11FIP3-210ENST00000487899 CFAP44Q96MT7 982 aa14.66□□□□□ -0.06
RAB11FIP3-210ENST00000487899 RRAGCQ9HB90 399 aa14.66□□□□□ -0.06
RAB11FIP3-210ENST00000487899 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
RAB11FIP3-210ENST00000487899 MBIPQ9NS73 344 aa14.66□□□□□ -0.06
RAB11FIP3-210ENST00000487899 APAF1O14727 1248 aa14.65□□□□□ -0.06
RAB11FIP3-210ENST00000487899 LAS1LQ9Y4W2 734 aaKnown RBP14.65□□□□□ -0.06
RAB11FIP3-210ENST00000487899 GTF2E1P29083 439 aaPredicted RBP14.64□□□□□ -0.07
RAB11FIP3-210ENST00000487899 HOXA10P31260 410 aaPredicted RBP14.64□□□□□ -0.07
RAB11FIP3-210ENST00000487899 FKBP4Q02790 459 aaKnown RBP eCLIP14.64□□□□□ -0.07
RAB11FIP3-210ENST00000487899 PARP10Q53GL7 1025 aa14.64□□□□□ -0.07
RAB11FIP3-210ENST00000487899 HDGFL1Q5TGJ6 251 aa14.64□□□□□ -0.07
RAB11FIP3-210ENST00000487899 COPS6Q7L5N1 327 aa14.64□□□□□ -0.07
RAB11FIP3-210ENST00000487899 RNF123Q5XPI4 1314 aa14.64□□□□□ -0.07
RAB11FIP3-210ENST00000487899 APLP1P51693 650 aa14.63□□□□□ -0.07
RAB11FIP3-210ENST00000487899 FSTL1Q12841 308 aa14.63□□□□□ -0.07
RAB11FIP3-210ENST00000487899 C16orf71Q8IYS4 520 aaPredicted RBP14.63□□□□□ -0.07
RAB11FIP3-210ENST00000487899 PSME4Q14997 1843 aa14.63□□□□□ -0.07
RAB11FIP3-210ENST00000487899 ZNF541Q9H0D2 1346 aa14.63□□□□□ -0.07
RAB11FIP3-210ENST00000487899 VEGFAP15692 232 aaPredicted RBP14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 ZEB1P37275 1124 aaPredicted RBP14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 AIMP1Q12904 312 aaKnown RBP14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 PPP1R42Q7Z4L9 355 aa14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 NLRP10Q86W26 655 aa14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 ZNF277Q9NRM2 450 aaPredicted RBP14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 IFT57Q9NWB7 429 aa14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 A0A1B0GUL6 1792 aa14.62□□□□□ -0.07
RAB11FIP3-210ENST00000487899 ALDH1B1P30837 517 aa14.61□□□□□ -0.07
RAB11FIP3-210ENST00000487899 DUSP27Q5VZP5 1158 aa14.61□□□□□ -0.07
RAB11FIP3-210ENST00000487899 ZNF646O15015 1829 aaPredicted RBP14.61□□□□□ -0.07
RAB11FIP3-210ENST00000487899 ABCC4O15439 1325 aa14.61□□□□□ -0.07
RAB11FIP3-210ENST00000487899 PPEF1O14829 653 aaPredicted RBP14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 TCIRG1Q13488 830 aa14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 HSP90AB3PQ58FF7 597 aa14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 SLC10A5Q5PT55 438 aa14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 RTKN2Q8IZC4 609 aa14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 SYNE4Q8N205 404 aa14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 SMC1BQ8NDV3 1235 aa14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 PSMD1Q99460 953 aa14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 UTP14AQ9BVJ6 771 aaKnown RBP14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 DBF4Q9UBU7 674 aaPredicted RBP14.6□□□□□ -0.07
RAB11FIP3-210ENST00000487899 TRPM7Q96QT4 1865 aa14.59□□□□□ -0.07
RAB11FIP3-210ENST00000487899 DDNO94850 711 aaPredicted RBP14.59□□□□□ -0.07
RAB11FIP3-210ENST00000487899 IARSP41252 1262 aaKnown RBP14.59□□□□□ -0.07
RAB11FIP3-210ENST00000487899 HTRA3P83110 453 aa14.59□□□□□ -0.07
RAB11FIP3-210ENST00000487899 L3MBTL3Q96JM7 780 aaPredicted RBP14.59□□□□□ -0.07
RAB11FIP3-210ENST00000487899 CRAMP1Q96RY5 1269 aa14.59□□□□□ -0.07
RAB11FIP3-210ENST00000487899 SCN9AQ15858 1988 aa14.58□□□□□ -0.07
RAB11FIP3-210ENST00000487899 POTEIP0CG38 1075 aa14.58□□□□□ -0.08
RAB11FIP3-210ENST00000487899 POTEJP0CG39 1038 aa14.58□□□□□ -0.08
RAB11FIP3-210ENST00000487899 GNAI1P63096 354 aa14.58□□□□□ -0.08
RAB11FIP3-210ENST00000487899 PLBD2Q8NHP8 589 aa14.58□□□□□ -0.08
RAB11FIP3-210ENST00000487899 SH3TC1Q8TE82 1336 aa14.58□□□□□ -0.08
RAB11FIP3-210ENST00000487899 FZD9O00144 591 aa14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 HCLS1P14317 486 aaPredicted RBP14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 C8orf58Q8NAV2 365 aa14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 ZNF428Q96B54 188 aa14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 RBM17Q96I25 401 aaKnown RBP14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 NLRP3Q96P20 1036 aa14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 ISCA1Q9BUE6 129 aa14.57□□□□□ -0.08
RAB11FIP3-210ENST00000487899 ZNF316A6NFI3 1004 aaPredicted RBP14.56□□□□□ -0.08
RAB11FIP3-210ENST00000487899 CC2D2BQ6DHV5 1058 aa14.56□□□□□ -0.08
RAB11FIP3-210ENST00000487899 HYPKQ9NX55 129 aa14.56□□□□□ -0.08
RAB11FIP3-210ENST00000487899 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
RAB11FIP3-210ENST00000487899 THSD7BQ9C0I4 1608 aa14.55□□□□□ -0.08
RAB11FIP3-210ENST00000487899 CCDC27Q2M243 656 aa14.55□□□□□ -0.08
RAB11FIP3-210ENST00000487899 ANKRD13DQ6ZTN6 518 aa14.55□□□□□ -0.08
RAB11FIP3-210ENST00000487899 TSPYL6Q8N831 410 aa14.55□□□□□ -0.08
RAB11FIP3-210ENST00000487899 JMYQ8N9B5 988 aa14.55□□□□□ -0.08
RAB11FIP3-210ENST00000487899 TSR2Q969E8 191 aaKnown RBP14.55□□□□□ -0.08
RAB11FIP3-210ENST00000487899 PHAXQ9H814 394 aaKnown RBP14.55□□□□□ -0.08
RAB11FIP3-210ENST00000487899 ATP6V0A2Q9Y487 856 aa14.55□□□□□ -0.08
RAB11FIP3-210ENST00000487899 ATP5J2-PTCD1G3V325 749 aa14.54□□□□□ -0.08
RAB11FIP3-210ENST00000487899 ELL2O00472 640 aaPredicted RBP14.54□□□□□ -0.08
RAB11FIP3-210ENST00000487899 MRS2Q9HD23 443 aa14.54□□□□□ -0.08
RAB11FIP3-210ENST00000487899 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
RAB11FIP3-210ENST00000487899 GRIPAP1Q4V328 841 aa14.53□□□□□ -0.08
RAB11FIP3-210ENST00000487899 WWC1Q8IX03 1113 aa14.53□□□□□ -0.08
RAB11FIP3-210ENST00000487899 TAF1DQ9H5J8 278 aaPredicted RBP14.53□□□□□ -0.08
RAB11FIP3-210ENST00000487899 IQCA1LA6NCM1 817 aa14.52□□□□□ -0.09
RAB11FIP3-210ENST00000487899 TRIM28Q13263 835 aaKnown RBP14.52□□□□□ -0.09
RAB11FIP3-210ENST00000487899 GRAPQ13588 217 aa14.52□□□□□ -0.09
RAB11FIP3-210ENST00000487899 GPC2Q8N158 579 aa14.52□□□□□ -0.09
RAB11FIP3-210ENST00000487899 GRAPLQ8TC17 118 aaPredicted RBP14.52□□□□□ -0.09
RAB11FIP3-210ENST00000487899 KLRG1Q96E93 195 aa14.52□□□□□ -0.09
RAB11FIP3-210ENST00000487899 FAM89AQ96GI7 184 aa14.52□□□□□ -0.09
RAB11FIP3-210ENST00000487899 IL16Q14005 1332 aa14.51□□□□□ -0.09
RAB11FIP3-210ENST00000487899 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
RAB11FIP3-210ENST00000487899 CHADLQ6NUI6 762 aa14.51□□□□□ -0.09
RAB11FIP3-210ENST00000487899 RTFDC1Q9BY42 306 aaPredicted RBP14.51□□□□□ -0.09
RAB11FIP3-210ENST00000487899 PASKQ96RG2 1323 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms