RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 TANGO6Q9C0B7 1094 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 BCS1LQ9Y276 419 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 AK5Q9Y6K8 562 aa5.02□□□□□ -1.61
GPNMB-212ENST00000487890 MEN1O00255 615 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 WNT7AO00755 349 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 EIF1AYO14602 144 aaKnown RBP5.01□□□□□ -1.61
GPNMB-212ENST00000487890 TXLNAP40222 546 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 C8orf34Q49A92 452 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 DPH6Q7L8W6 267 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 PPARGC1BQ86YN6 1023 aaKnown RBP5.01□□□□□ -1.61
GPNMB-212ENST00000487890 NBPF15Q8N660 670 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 C7orf43Q8WVR3 580 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 DHX38Q92620 1227 aaKnown RBP5.01□□□□□ -1.61
GPNMB-212ENST00000487890 KLRG1Q96E93 195 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 SPATA32Q96LK8 384 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 CCSER2Q9H7U1 834 aa5.01□□□□□ -1.61
GPNMB-212ENST00000487890 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.01□□□□□ -1.61
GPNMB-212ENST00000487890 GRIN2AQ12879 1464 aa5□□□□□ -1.61
GPNMB-212ENST00000487890 OPLAHO14841 1288 aa5□□□□□ -1.61
GPNMB-212ENST00000487890 ITGAEP38570 1179 aa5□□□□□ -1.61
GPNMB-212ENST00000487890 RACK1P63244 317 aaKnown RBP5□□□□□ -1.61
GPNMB-212ENST00000487890 FBF1Q8TES7 1133 aa5□□□□□ -1.61
GPNMB-212ENST00000487890 ZSCAN10Q96SZ4 725 aaPredicted RBP5□□□□□ -1.61
GPNMB-212ENST00000487890 DNAJC2Q99543 621 aaKnown RBP5□□□□□ -1.61
GPNMB-212ENST00000487890 NIFKQ9BYG3 293 aaKnown RBP5□□□□□ -1.61
GPNMB-212ENST00000487890 PRKAG2Q9UGJ0 569 aa5□□□□□ -1.61
GPNMB-212ENST00000487890 CEP170Q5SW79 1584 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 FHAD1B1AJZ9 1412 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 ERICH3Q5RHP9 1530 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 MICAL2O94851 1124 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 ALDH1A1P00352 501 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 PCSK2P16519 638 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 NNTQ13423 1086 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.99□□□□□ -1.61
GPNMB-212ENST00000487890 ZNF394Q53GI3 561 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 C1orf53Q5VUE5 145 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 USPL1Q5W0Q7 1092 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 GIMAP6Q6P9H5 292 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 Q6ZVU0 165 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 ITPKCQ96DU7 683 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 NLRP3Q96P20 1036 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 KLF16Q9BXK1 252 aaPredicted RBP4.99□□□□□ -1.61
GPNMB-212ENST00000487890 ZNF395Q9H8N7 513 aaPredicted RBP4.99□□□□□ -1.61
GPNMB-212ENST00000487890 DDX41Q9UJV9 622 aaKnown RBP4.99□□□□□ -1.61
GPNMB-212ENST00000487890 ERCC6L2Q5T890 1561 aa4.99□□□□□ -1.61
GPNMB-212ENST00000487890 ATP2B1P20020 1258 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 EIF4BP23588 611 aaKnown RBP4.98□□□□□ -1.61
GPNMB-212ENST00000487890 GTF2F1P35269 517 aaKnown RBP eCLIP4.98□□□□□ -1.61
GPNMB-212ENST00000487890 RELBQ01201 579 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 TMEM214Q6NUQ4 689 aaKnown RBP4.98□□□□□ -1.61
GPNMB-212ENST00000487890 PI16Q6UXB8 463 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 ZNF280CQ8ND82 737 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 CRELD1Q96HD1 420 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 FRMD6Q96NE9 622 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 OSBPL7Q9BZF2 842 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 LNPKQ9C0E8 428 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 DNAJC25Q9H1X3 360 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 ZFAND3Q9H8U3 227 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 SRA1Q9HD15 236 aaKnown RBP4.98□□□□□ -1.61
GPNMB-212ENST00000487890 PCDHGB7Q9Y5F8 929 aa4.98□□□□□ -1.61
GPNMB-212ENST00000487890 CPNE3O75131 537 aaKnown RBP4.97□□□□□ -1.61
GPNMB-212ENST00000487890 ZIC2O95409 532 aaPredicted RBP4.97□□□□□ -1.61
GPNMB-212ENST00000487890 DNAJA1P31689 397 aaKnown RBP4.97□□□□□ -1.61
GPNMB-212ENST00000487890 IRS1P35568 1242 aa4.97□□□□□ -1.61
GPNMB-212ENST00000487890 SLC19A1P41440 591 aa4.97□□□□□ -1.61
GPNMB-212ENST00000487890 EPS8L3Q8TE67 593 aaKnown RBP4.97□□□□□ -1.61
GPNMB-212ENST00000487890 RHBDD1Q8TEB9 315 aa4.97□□□□□ -1.61
GPNMB-212ENST00000487890 GMLQ99445 158 aa4.97□□□□□ -1.61
GPNMB-212ENST00000487890 GRIP2Q9C0E4 1043 aa4.97□□□□□ -1.61
GPNMB-212ENST00000487890 NLRP2Q9NX02 1062 aa4.97□□□□□ -1.61
GPNMB-212ENST00000487890 DMGDHQ9UI17 866 aaKnown RBP4.97□□□□□ -1.61
GPNMB-212ENST00000487890 FOXD3Q9UJU5 478 aaPredicted RBP4.97□□□□□ -1.61
GPNMB-212ENST00000487890 USP20Q9Y2K6 914 aa4.97□□□□□ -1.61
GPNMB-212ENST00000487890 NUP160Q12769 1436 aa4.97□□□□□ -1.61
GPNMB-212ENST00000487890 CUL7Q14999 1698 aa4.96□□□□□ -1.61
GPNMB-212ENST00000487890 USP31Q70CQ4 1352 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 TNFRSF21O75509 655 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 NEFLP07196 543 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 CANXP27824 592 aaKnown RBP4.96□□□□□ -1.62
GPNMB-212ENST00000487890 PLA2G4AP47712 749 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 PTPN12Q05209 780 aaKnown RBP4.96□□□□□ -1.62
GPNMB-212ENST00000487890 C4orf17Q53FE4 359 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 ZNF654Q8IZM8 581 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 TTC16Q8NEE8 873 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 CCDC74AQ96AQ1 378 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 SUSD3Q96L08 255 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 FAM13BQ9NYF5 915 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 HCSTQ9UBK5 93 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 SPG7Q9UQ90 795 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 INPP5FQ9Y2H2 1132 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 WASF2Q9Y6W5 498 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 SHROOM2Q13796 1616 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 KIF27Q86VH2 1401 aa4.96□□□□□ -1.62
GPNMB-212ENST00000487890 TTBK1Q5TCY1 1321 aaPredicted RBP4.96□□□□□ -1.62
GPNMB-212ENST00000487890 TGFBR3LH3BV60 316 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 RPLP1P05386 114 aaKnown RBP4.95□□□□□ -1.62
GPNMB-212ENST00000487890 CDK11BP21127 795 aaKnown RBP4.95□□□□□ -1.62
GPNMB-212ENST00000487890 IDH3AP50213 366 aa4.95□□□□□ -1.62
GPNMB-212ENST00000487890 WDR4P57081 412 aaKnown RBP4.95□□□□□ -1.62
GPNMB-212ENST00000487890 FOXC1Q12948 553 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms