RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 NCOA1Q15788 1441 aa7.75□□□□□ -1.17
CNN3-206ENST00000487539 AKNAQ7Z591 1439 aa7.75□□□□□ -1.17
CNN3-206ENST00000487539 SETD1BQ9UPS6 1966 aaKnown RBP7.75□□□□□ -1.17
CNN3-206ENST00000487539 ELNP15502 786 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 PCBP4P57723 403 aaKnown RBP7.74□□□□□ -1.17
CNN3-206ENST00000487539 GRIK4Q16099 956 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 C4orf17Q53FE4 359 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 GNASQ5JWF2 1037 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 ESYT1Q9BSJ8 1104 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 ZCCHC2Q9C0B9 1178 aaKnown RBP7.74□□□□□ -1.17
CNN3-206ENST00000487539 OSBPL3Q9H4L5 887 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 COG6Q9Y2V7 657 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 PCDHGC4Q9Y5F7 938 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 FHOD3Q2V2M9 1422 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 KIF27Q86VH2 1401 aa7.74□□□□□ -1.17
CNN3-206ENST00000487539 DENND4BO75064 1496 aaPredicted RBP7.74□□□□□ -1.17
CNN3-206ENST00000487539 EIF4G2P78344 907 aaKnown RBP eCLIP7.73□□□□□ -1.17
CNN3-206ENST00000487539 TMEM214Q6NUQ4 689 aaKnown RBP7.73□□□□□ -1.17
CNN3-206ENST00000487539 CCDC125Q86Z20 511 aa7.73□□□□□ -1.17
CNN3-206ENST00000487539 ZFYVE16Q7Z3T8 1539 aa7.73□□□□□ -1.17
CNN3-206ENST00000487539 TRAK2O60296 914 aa7.72□□□□□ -1.17
CNN3-206ENST00000487539 IL2RAP01589 272 aa7.72□□□□□ -1.17
CNN3-206ENST00000487539 TRIM28Q13263 835 aaKnown RBP7.72□□□□□ -1.17
CNN3-206ENST00000487539 IRF5Q13568 498 aa7.72□□□□□ -1.17
CNN3-206ENST00000487539 FIGNL1Q6PIW4 674 aa7.72□□□□□ -1.17
CNN3-206ENST00000487539 CRISPLD1Q9H336 500 aa7.72□□□□□ -1.17
CNN3-206ENST00000487539 ESF1Q9H501 851 aaKnown RBP7.72□□□□□ -1.17
CNN3-206ENST00000487539 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
CNN3-206ENST00000487539 HCN2Q9UL51 889 aa7.72□□□□□ -1.17
CNN3-206ENST00000487539 CD33P20138 364 aa7.71□□□□□ -1.18
CNN3-206ENST00000487539 GTF2E1P29083 439 aaPredicted RBP7.71□□□□□ -1.18
CNN3-206ENST00000487539 RNF20Q5VTR2 975 aa7.71□□□□□ -1.18
CNN3-206ENST00000487539 HECW1Q76N89 1606 aa7.7□□□□□ -1.18
CNN3-206ENST00000487539 SOX11P35716 441 aa7.7□□□□□ -1.18
CNN3-206ENST00000487539 DNAAF2Q9NVR5 837 aaKnown RBP7.7□□□□□ -1.18
CNN3-206ENST00000487539 ALKQ9UM73 1620 aa7.7□□□□□ -1.18
CNN3-206ENST00000487539 ATXN7O15265 892 aaPredicted RBP7.69□□□□□ -1.18
CNN3-206ENST00000487539 FAM182BQ5T319 152 aa7.69□□□□□ -1.18
CNN3-206ENST00000487539 CAMSAP1Q5T5Y3 1602 aa7.69□□□□□ -1.18
CNN3-206ENST00000487539 SETD1AO15047 1707 aaKnown RBP7.69□□□□□ -1.18
CNN3-206ENST00000487539 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 C3P01024 1663 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 DCDC2BA2VCK2 349 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 GNRH1P01148 92 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 MAPTP10636 758 aaKnown RBP7.68□□□□□ -1.18
CNN3-206ENST00000487539 ALAS2P22557 587 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 TNP2Q05952 138 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 VAC14Q08AM6 782 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 POM121Q96HA1 1249 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 FHDC1Q9C0D6 1143 aaPredicted RBP7.68□□□□□ -1.18
CNN3-206ENST00000487539 PRR12Q9ULL5 1215 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 HRH3Q9Y5N1 445 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 ATP10AO60312 1499 aa7.68□□□□□ -1.18
CNN3-206ENST00000487539 ELOA3CA0A087WX78 387 aaPredicted RBP7.67□□□□□ -1.18
CNN3-206ENST00000487539 ELOA3DA6NLF2 546 aaPredicted RBP7.67□□□□□ -1.18
CNN3-206ENST00000487539 C9orf172C9J069 976 aa7.67□□□□□ -1.18
CNN3-206ENST00000487539 TOM1O60784 492 aa7.67□□□□□ -1.18
CNN3-206ENST00000487539 COL9A3Q14050 684 aaPredicted RBP7.67□□□□□ -1.18
CNN3-206ENST00000487539 ELOA3BQ3SY89 546 aa7.67□□□□□ -1.18
CNN3-206ENST00000487539 ELOA3Q8NG57 546 aa7.67□□□□□ -1.18
CNN3-206ENST00000487539 TP53INP1Q96A56 240 aa7.67□□□□□ -1.18
CNN3-206ENST00000487539 PCDHB11Q9Y5F2 797 aa7.67□□□□□ -1.18
CNN3-206ENST00000487539 EFCAB5A4FU69 1503 aa7.67□□□□□ -1.18
CNN3-206ENST00000487539 SUPT5HO00267 1087 aaKnown RBP7.66□□□□□ -1.18
CNN3-206ENST00000487539 ADGRE1Q14246 886 aa7.66□□□□□ -1.18
CNN3-206ENST00000487539 MBTPS1Q14703 1052 aa7.66□□□□□ -1.18
CNN3-206ENST00000487539 ZNF468Q5VIY5 522 aaPredicted RBP7.66□□□□□ -1.18
CNN3-206ENST00000487539 XAGE2Q96GT9 111 aa7.66□□□□□ -1.18
CNN3-206ENST00000487539 CEP126Q9P2H0 1117 aa7.66□□□□□ -1.18
CNN3-206ENST00000487539 RNF112Q9ULX5 631 aa7.66□□□□□ -1.18
CNN3-206ENST00000487539 TRAPPC8Q9Y2L5 1435 aa7.66□□□□□ -1.18
CNN3-206ENST00000487539 M0R082 166 aa7.65□□□□□ -1.18
CNN3-206ENST00000487539 KHNYNO15037 678 aaKnown RBP7.65□□□□□ -1.18
CNN3-206ENST00000487539 SEMA3FQ13275 785 aa7.65□□□□□ -1.18
CNN3-206ENST00000487539 NLRP8Q86W28 1048 aa7.65□□□□□ -1.18
CNN3-206ENST00000487539 ZNF417Q8TAU3 575 aa7.65□□□□□ -1.18
CNN3-206ENST00000487539 ZNF587Q96SQ5 575 aaPredicted RBP7.65□□□□□ -1.18
CNN3-206ENST00000487539 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.19
CNN3-206ENST00000487539 MAGI2Q86UL8 1455 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 C9orf84Q5VXU9 1444 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 SCAPERQ9BY12 1400 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 A6NJR5 290 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 IRAK1P51617 712 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 LAMC2Q13753 1193 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 SLFNL1Q499Z3 407 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 TXNRD3Q86VQ6 643 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 PROSER2Q86WR7 435 aaPredicted RBP7.64□□□□□ -1.19
CNN3-206ENST00000487539 PCMTD2Q9NV79 361 aa7.64□□□□□ -1.19
CNN3-206ENST00000487539 RAPGEF2Q9Y4G8 1499 aa7.63□□□□□ -1.19
CNN3-206ENST00000487539 C8orf86Q6ZUL3 223 aa7.63□□□□□ -1.19
CNN3-206ENST00000487539 RHBDD1Q8TEB9 315 aa7.63□□□□□ -1.19
CNN3-206ENST00000487539 CLUAP1Q96AJ1 413 aa7.63□□□□□ -1.19
CNN3-206ENST00000487539 RNF114Q9Y508 228 aa7.63□□□□□ -1.19
CNN3-206ENST00000487539 GTF3C3Q9Y5Q9 886 aa7.63□□□□□ -1.19
CNN3-206ENST00000487539 SELPP16109 830 aa7.62□□□□□ -1.19
CNN3-206ENST00000487539 TBC1D9Q6ZT07 1266 aa7.62□□□□□ -1.19
CNN3-206ENST00000487539 TAL1P17542 331 aaPredicted RBP7.61□□□□□ -1.19
CNN3-206ENST00000487539 PPARGC1BQ86YN6 1023 aaKnown RBP7.61□□□□□ -1.19
CNN3-206ENST00000487539 AFAP1Q8N556 730 aa7.61□□□□□ -1.19
CNN3-206ENST00000487539 PLA2G4AP47712 749 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms