RNA–Protein interactions for RNA: ENST00000487433.6

PHF11-213, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-213ENST00000487433 ABCC12Q96J65 1359 aa22.61■■□□□ 1.21
PHF11-213ENST00000487433 KIAA1551Q9HCM1 1747 aa22.6■■□□□ 1.21
PHF11-213ENST00000487433 BCAR3O75815 825 aa22.6■■□□□ 1.21
PHF11-213ENST00000487433 NEXNQ0ZGT2 675 aa22.6■■□□□ 1.21
PHF11-213ENST00000487433 CCDC191Q8NCU4 936 aa22.6■■□□□ 1.21
PHF11-213ENST00000487433 TRMT112Q9UI30 125 aaKnown RBP22.6■■□□□ 1.21
PHF11-213ENST00000487433 NOB1Q9ULX3 412 aaKnown RBP22.6■■□□□ 1.21
PHF11-213ENST00000487433 A0A0G2JLW4 131 aa22.59■■□□□ 1.21
PHF11-213ENST00000487433 DPEP1P16444 411 aa22.59■■□□□ 1.21
PHF11-213ENST00000487433 CHRNA5P30532 468 aa22.59■■□□□ 1.21
PHF11-213ENST00000487433 CWF19L2Q2TBE0 894 aaKnown RBP22.59■■□□□ 1.21
PHF11-213ENST00000487433 SYNE4Q8N205 404 aa22.59■■□□□ 1.21
PHF11-213ENST00000487433 CWC25Q9NXE8 425 aaPredicted RBP22.59■■□□□ 1.21
PHF11-213ENST00000487433 ANKRD31Q8N7Z5 1873 aa22.59■■□□□ 1.21
PHF11-213ENST00000487433 RNF123Q5XPI4 1314 aa22.58■■□□□ 1.21
PHF11-213ENST00000487433 NEURL1BA8MQ27 555 aa22.58■■□□□ 1.21
PHF11-213ENST00000487433 BEND3Q5T5X7 828 aa22.58■■□□□ 1.21
PHF11-213ENST00000487433 LINS1Q8NG48 757 aa22.58■■□□□ 1.21
PHF11-213ENST00000487433 KCNA3P22001 575 aa22.57■■□□□ 1.2
PHF11-213ENST00000487433 PDE6BP35913 854 aa22.57■■□□□ 1.2
PHF11-213ENST00000487433 SLC10A5Q5PT55 438 aa22.57■■□□□ 1.2
PHF11-213ENST00000487433 RIC1Q4ADV7 1423 aa22.57■■□□□ 1.2
PHF11-213ENST00000487433 SH3TC1Q8TE82 1336 aa22.57■■□□□ 1.2
PHF11-213ENST00000487433 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
PHF11-213ENST00000487433 KLRG2A4D1S0 409 aaPredicted RBP22.56■■□□□ 1.2
PHF11-213ENST00000487433 C2CD5Q86YS7 1000 aa22.56■■□□□ 1.2
PHF11-213ENST00000487433 FAM89AQ96GI7 184 aa22.56■■□□□ 1.2
PHF11-213ENST00000487433 N4BP2Q86UW6 1770 aaPredicted RBP22.55■■□□□ 1.2
PHF11-213ENST00000487433 RTL5Q5HYW3 569 aaPredicted RBP22.55■■□□□ 1.2
PHF11-213ENST00000487433 SLC4A10Q6U841 1118 aa22.55■■□□□ 1.2
PHF11-213ENST00000487433 TNRC6CQ9HCJ0 1690 aaKnown RBP22.55■■□□□ 1.2
PHF11-213ENST00000487433 H0YIN7 160 aa22.54■■□□□ 1.2
PHF11-213ENST00000487433 PCCAP05165 728 aaPredicted RBP22.54■■□□□ 1.2
PHF11-213ENST00000487433 HCLS1P14317 486 aaPredicted RBP22.54■■□□□ 1.2
PHF11-213ENST00000487433 ZBTB38Q8NAP3 1195 aaPredicted RBP22.54■■□□□ 1.2
PHF11-213ENST00000487433 JARID2Q92833 1246 aaPredicted RBP22.54■■□□□ 1.2
PHF11-213ENST00000487433 PDZRN3Q9UPQ7 1066 aa22.54■■□□□ 1.2
PHF11-213ENST00000487433 GCKRQ14397 625 aa22.53■■□□□ 1.2
PHF11-213ENST00000487433 C3orf67Q6ZVT6 689 aa22.53■■□□□ 1.2
PHF11-213ENST00000487433 ARHGAP45Q92619 1136 aa22.53■■□□□ 1.2
PHF11-213ENST00000487433 API5Q9BZZ5 524 aaKnown RBP22.53■■□□□ 1.2
PHF11-213ENST00000487433 WWC3Q9ULE0 1092 aa22.53■■□□□ 1.2
PHF11-213ENST00000487433 SRGNP10124 158 aa22.52■■□□□ 1.2
PHF11-213ENST00000487433 FRAT1Q92837 279 aaPredicted RBP22.52■■□□□ 1.2
PHF11-213ENST00000487433 SRCIN1Q9C0H9 1055 aa22.52■■□□□ 1.2
PHF11-213ENST00000487433 COL11A2P13942 1736 aaPredicted RBP22.51■■□□□ 1.19
PHF11-213ENST00000487433 H7C1W4 665 aa22.51■■□□□ 1.19
PHF11-213ENST00000487433 ALDH1L1O75891 902 aa22.51■■□□□ 1.19
PHF11-213ENST00000487433 CRY2Q49AN0 593 aa22.51■■□□□ 1.19
PHF11-213ENST00000487433 NLRP3Q96P20 1036 aa22.51■■□□□ 1.19
PHF11-213ENST00000487433 RCAN3Q9UKA8 241 aa22.51■■□□□ 1.19
PHF11-213ENST00000487433 IRS4O14654 1257 aaPredicted RBP22.5■■□□□ 1.19
PHF11-213ENST00000487433 IPO8O15397 1037 aaKnown RBP22.5■■□□□ 1.19
PHF11-213ENST00000487433 PIM2Q9P1W9 311 aa22.5■■□□□ 1.19
PHF11-213ENST00000487433 NPR1P16066 1061 aa22.49■■□□□ 1.19
PHF11-213ENST00000487433 STYK1Q6J9G0 422 aa22.49■■□□□ 1.19
PHF11-213ENST00000487433 ZNF622Q969S3 477 aaKnown RBP eCLIP22.49■■□□□ 1.19
PHF11-213ENST00000487433 TNNQ9UQP3 1299 aa22.49■■□□□ 1.19
PHF11-213ENST00000487433 CDHR2Q9BYE9 1310 aa22.49■■□□□ 1.19
PHF11-213ENST00000487433 DLEC1Q9Y238 1755 aa22.48■■□□□ 1.19
PHF11-213ENST00000487433 TRIM27P14373 513 aa22.48■■□□□ 1.19
PHF11-213ENST00000487433 YBX3P16989 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
PHF11-213ENST00000487433 CASP7P55210 303 aa22.48■■□□□ 1.19
PHF11-213ENST00000487433 ZKSCAN2Q63HK3 967 aa22.48■■□□□ 1.19
PHF11-213ENST00000487433 ATF7IPQ6VMQ6 1270 aa22.48■■□□□ 1.19
PHF11-213ENST00000487433 UBE3BQ7Z3V4 1068 aa22.48■■□□□ 1.19
PHF11-213ENST00000487433 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
PHF11-213ENST00000487433 MASTLQ96GX5 879 aa22.48■■□□□ 1.19
PHF11-213ENST00000487433 DDX60Q8IY21 1712 aaKnown RBP22.48■■□□□ 1.19
PHF11-213ENST00000487433 BRCA1P38398 1863 aaKnown RBP22.47■■□□□ 1.19
PHF11-213ENST00000487433 ABCC4O15439 1325 aa22.47■■□□□ 1.19
PHF11-213ENST00000487433 GRM8O00222 908 aa22.46■■□□□ 1.19
PHF11-213ENST00000487433 HOXA10P31260 410 aaPredicted RBP22.46■■□□□ 1.19
PHF11-213ENST00000487433 DALRD3Q5D0E6 543 aaKnown RBP22.46■■□□□ 1.19
PHF11-213ENST00000487433 TTLL6Q8N841 843 aa22.46■■□□□ 1.19
PHF11-213ENST00000487433 BCS1LQ9Y276 419 aa22.46■■□□□ 1.19
PHF11-213ENST00000487433 PDE8AO60658 829 aa22.45■■□□□ 1.18
PHF11-213ENST00000487433 HSP90B1P14625 803 aaKnown RBP22.45■■□□□ 1.18
PHF11-213ENST00000487433 CCT4P50991 539 aaKnown RBP22.45■■□□□ 1.18
PHF11-213ENST00000487433 SF3B3Q15393 1217 aaKnown RBP22.45■■□□□ 1.18
PHF11-213ENST00000487433 GPR162Q16538 588 aa22.45■■□□□ 1.18
PHF11-213ENST00000487433 RPGRQ92834 1020 aaKnown RBP22.45■■□□□ 1.18
PHF11-213ENST00000487433 LAMB2P55268 1798 aa22.45■■□□□ 1.18
PHF11-213ENST00000487433 CNKSR1Q969H4 720 aa22.44■■□□□ 1.18
PHF11-213ENST00000487433 CLUAP1Q96AJ1 413 aa22.44■■□□□ 1.18
PHF11-213ENST00000487433 C9orf78Q9NZ63 289 aaPredicted RBP22.44■■□□□ 1.18
PHF11-213ENST00000487433 INTS3Q68E01 1043 aaKnown RBP22.43■■□□□ 1.18
PHF11-213ENST00000487433 PLA2G12BQ9BX93 195 aa22.43■■□□□ 1.18
PHF11-213ENST00000487433 UTYO14607 1347 aa22.42■■□□□ 1.18
PHF11-213ENST00000487433 RBM17Q96I25 401 aaKnown RBP22.42■■□□□ 1.18
PHF11-213ENST00000487433 CRAMP1Q96RY5 1269 aa22.42■■□□□ 1.18
PHF11-213ENST00000487433 USP44Q9H0E7 712 aa22.42■■□□□ 1.18
PHF11-213ENST00000487433 NBPF7P0C2Y1 421 aaPredicted RBP22.41■■□□□ 1.18
PHF11-213ENST00000487433 ALDH1B1P30837 517 aa22.41■■□□□ 1.18
PHF11-213ENST00000487433 PRPF40BQ6NWY9 871 aaKnown RBP22.41■■□□□ 1.18
PHF11-213ENST00000487433 DCAF8L1A6NGE4 600 aa22.4■■□□□ 1.18
PHF11-213ENST00000487433 CTSWP56202 376 aa22.4■■□□□ 1.18
PHF11-213ENST00000487433 DDX46Q7L014 1031 aaKnown RBP22.39■■□□□ 1.17
PHF11-213ENST00000487433 TMEM57Q8N5G2 664 aa22.39■■□□□ 1.17
PHF11-213ENST00000487433 TTLL11Q8NHH1 800 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms