RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
RNF220-215ENST00000487332 ISCA1Q9BUE6 129 aa13.25□□□□□ -0.29
RNF220-215ENST00000487332 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
RNF220-215ENST00000487332 NFKBIEO00221 500 aa13.24□□□□□ -0.29
RNF220-215ENST00000487332 LMNB1P20700 586 aa13.24□□□□□ -0.29
RNF220-215ENST00000487332 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
RNF220-215ENST00000487332 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
RNF220-215ENST00000487332 NUTM1Q86Y26 1132 aa13.24□□□□□ -0.29
RNF220-215ENST00000487332 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
RNF220-215ENST00000487332 DDX58O95786 925 aaKnown RBP13.23□□□□□ -0.29
RNF220-215ENST00000487332 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
RNF220-215ENST00000487332 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
RNF220-215ENST00000487332 C9orf131Q5VYM1 1079 aa13.23□□□□□ -0.29
RNF220-215ENST00000487332 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
RNF220-215ENST00000487332 TSPYL6Q8N831 410 aa13.23□□□□□ -0.29
RNF220-215ENST00000487332 CRAMP1Q96RY5 1269 aa13.23□□□□□ -0.29
RNF220-215ENST00000487332 MYH16Q9H6N6 1097 aa13.23□□□□□ -0.29
RNF220-215ENST00000487332 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
RNF220-215ENST00000487332 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
RNF220-215ENST00000487332 SH3TC1Q8TE82 1336 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 FAM177BA6PVY3 158 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 C21orf2O43822 256 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 RASSF7Q02833 373 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 NLRP3Q96P20 1036 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 TAOK3Q9H2K8 898 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 GPBP1L1Q9HC44 474 aaPredicted RBP13.22□□□□□ -0.29
RNF220-215ENST00000487332 RNF181Q9P0P0 153 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 SBF1O95248 1867 aa13.22□□□□□ -0.29
RNF220-215ENST00000487332 CACNA1SQ13698 1873 aa13.21□□□□□ -0.29
RNF220-215ENST00000487332 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
RNF220-215ENST00000487332 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
RNF220-215ENST00000487332 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.29
RNF220-215ENST00000487332 LRRC37AA6NMS7 1700 aa13.2□□□□□ -0.3
RNF220-215ENST00000487332 PRELPP51888 382 aa13.2□□□□□ -0.3
RNF220-215ENST00000487332 RTKN2Q8IZC4 609 aa13.2□□□□□ -0.3
RNF220-215ENST00000487332 CCDC191Q8NCU4 936 aa13.2□□□□□ -0.3
RNF220-215ENST00000487332 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
RNF220-215ENST00000487332 TRMT112Q9UI30 125 aaKnown RBP13.2□□□□□ -0.3
RNF220-215ENST00000487332 DICER1Q9UPY3 1922 aaKnown RBP13.19□□□□□ -0.3
RNF220-215ENST00000487332 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
RNF220-215ENST00000487332 HSP90B1P14625 803 aaKnown RBP13.19□□□□□ -0.3
RNF220-215ENST00000487332 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
RNF220-215ENST00000487332 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
RNF220-215ENST00000487332 PSMD1Q99460 953 aa13.19□□□□□ -0.3
RNF220-215ENST00000487332 METTL22Q9BUU2 404 aaPredicted RBP13.19□□□□□ -0.3
RNF220-215ENST00000487332 VAMP4O75379 141 aa13.18□□□□□ -0.3
RNF220-215ENST00000487332 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
RNF220-215ENST00000487332 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
RNF220-215ENST00000487332 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
RNF220-215ENST00000487332 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
RNF220-215ENST00000487332 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
RNF220-215ENST00000487332 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
RNF220-215ENST00000487332 ABCC4O15439 1325 aa13.17□□□□□ -0.3
RNF220-215ENST00000487332 E9PSI1 815 aa13.17□□□□□ -0.3
RNF220-215ENST00000487332 KIF3CO14782 793 aa13.17□□□□□ -0.3
RNF220-215ENST00000487332 PPEF1O14829 653 aaPredicted RBP13.17□□□□□ -0.3
RNF220-215ENST00000487332 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
RNF220-215ENST00000487332 SF3B3Q15393 1217 aaKnown RBP13.17□□□□□ -0.3
RNF220-215ENST00000487332 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
RNF220-215ENST00000487332 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
RNF220-215ENST00000487332 CACNA1FO60840 1977 aa13.16□□□□□ -0.3
RNF220-215ENST00000487332 GLTPD2A6NH11 291 aa13.16□□□□□ -0.3
RNF220-215ENST00000487332 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
RNF220-215ENST00000487332 PCCAP05165 728 aaPredicted RBP13.16□□□□□ -0.3
RNF220-215ENST00000487332 FLIIQ13045 1269 aa13.16□□□□□ -0.3
RNF220-215ENST00000487332 GRAPQ13588 217 aa13.16□□□□□ -0.3
RNF220-215ENST00000487332 GRAPLQ8TC17 118 aaPredicted RBP13.16□□□□□ -0.3
RNF220-215ENST00000487332 ZNF428Q96B54 188 aa13.16□□□□□ -0.3
RNF220-215ENST00000487332 MYD88Q99836 296 aa13.16□□□□□ -0.3
RNF220-215ENST00000487332 CWC25Q9NXE8 425 aaPredicted RBP13.16□□□□□ -0.3
RNF220-215ENST00000487332 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
RNF220-215ENST00000487332 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 BBOX1O75936 387 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 VPS33BQ9H267 617 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 MAP3K2Q9Y2U5 619 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 ATP6V0A2Q9Y487 856 aa13.15□□□□□ -0.3
RNF220-215ENST00000487332 IRS4O14654 1257 aaPredicted RBP13.14□□□□□ -0.31
RNF220-215ENST00000487332 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
RNF220-215ENST00000487332 HCLS1P14317 486 aaPredicted RBP13.14□□□□□ -0.31
RNF220-215ENST00000487332 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
RNF220-215ENST00000487332 FAM89AQ96GI7 184 aa13.14□□□□□ -0.31
RNF220-215ENST00000487332 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
RNF220-215ENST00000487332 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
RNF220-215ENST00000487332 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
RNF220-215ENST00000487332 RTL9Q8NET4 1388 aa13.13□□□□□ -0.31
RNF220-215ENST00000487332 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
RNF220-215ENST00000487332 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
RNF220-215ENST00000487332 G2E3Q7L622 706 aa13.13□□□□□ -0.31
RNF220-215ENST00000487332 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
RNF220-215ENST00000487332 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
RNF220-215ENST00000487332 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
RNF220-215ENST00000487332 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
RNF220-215ENST00000487332 NEURL1BA8MQ27 555 aa13.12□□□□□ -0.31
RNF220-215ENST00000487332 TOMM70O94826 608 aa13.12□□□□□ -0.31
RNF220-215ENST00000487332 CT47B1P0C2W7 299 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms