RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 ATG3Q9NT62 314 aa27.5■■□□□ 1.99
LRRC1-203ENST00000487251 CHMP3Q9Y3E7 222 aa27.5■■□□□ 1.99
LRRC1-203ENST00000487251 NOL8Q76FK4 1167 aaKnown RBP27.5■■□□□ 1.99
LRRC1-203ENST00000487251 PANK2Q9BZ23 570 aa27.5■■□□□ 1.99
LRRC1-203ENST00000487251 UPF3BQ9BZI7 483 aaKnown RBP27.5■■□□□ 1.99
LRRC1-203ENST00000487251 BOLA2Q9H3K6 86 aa27.5■■□□□ 1.99
LRRC1-203ENST00000487251 COL22A1Q8NFW1 1626 aaPredicted RBP27.5■■□□□ 1.99
LRRC1-203ENST00000487251 H7C1W4 665 aa27.49■■□□□ 1.99
LRRC1-203ENST00000487251 TFCP2Q12800 502 aa27.49■■□□□ 1.99
LRRC1-203ENST00000487251 LSG1Q9H089 658 aaKnown RBP27.49■■□□□ 1.99
LRRC1-203ENST00000487251 CWC25Q9NXE8 425 aaPredicted RBP27.49■■□□□ 1.99
LRRC1-203ENST00000487251 FOXO4P98177 505 aa27.49■■□□□ 1.99
LRRC1-203ENST00000487251 FSD2A1L4K1 749 aa27.48■■□□□ 1.99
LRRC1-203ENST00000487251 DIAPH3Q9NSV4 1193 aa27.48■■□□□ 1.99
LRRC1-203ENST00000487251 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.48■■□□□ 1.99
LRRC1-203ENST00000487251 ADAMTS2O95450 1211 aa27.48■■□□□ 1.99
LRRC1-203ENST00000487251 HSPA4P34932 840 aa27.48■■□□□ 1.99
LRRC1-203ENST00000487251 RAD50Q92878 1312 aa27.48■■□□□ 1.99
LRRC1-203ENST00000487251 COL15A1P39059 1388 aa27.47■■□□□ 1.99
LRRC1-203ENST00000487251 ANAPC15P60006 121 aa27.47■■□□□ 1.99
LRRC1-203ENST00000487251 GZF1Q9H116 711 aaPredicted RBP27.47■■□□□ 1.99
LRRC1-203ENST00000487251 GOLGA6L3A6NEY3 463 aa27.46■■□□□ 1.99
LRRC1-203ENST00000487251 PKP1Q13835 747 aa27.46■■□□□ 1.99
LRRC1-203ENST00000487251 SYTL4Q96C24 671 aaPredicted RBP27.46■■□□□ 1.99
LRRC1-203ENST00000487251 EVI5LQ96CN4 794 aa27.45■■□□□ 1.99
LRRC1-203ENST00000487251 WNK3Q9BYP7 1800 aa27.45■■□□□ 1.99
LRRC1-203ENST00000487251 PLCH1Q4KWH8 1693 aa27.45■■□□□ 1.99
LRRC1-203ENST00000487251 EDC3Q96F86 508 aaKnown RBP27.45■■□□□ 1.98
LRRC1-203ENST00000487251 LTBP4Q8N2S1 1624 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 PTH1RQ03431 593 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 SLC4A9Q96Q91 983 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 DBNLQ9UJU6 430 aaKnown RBP27.44■■□□□ 1.98
LRRC1-203ENST00000487251 TNNI3KQ59H18 835 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 RASEFQ8IZ41 740 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 TMX3Q96JJ7 454 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 FAM227BQ96M60 508 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 NDUFB9Q9Y6M9 179 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 FPGT-TNNI3KV9GXZ4 949 aa27.44■■□□□ 1.98
LRRC1-203ENST00000487251 PHLPP1O60346 1717 aa27.42■■□□□ 1.98
LRRC1-203ENST00000487251 CCDC191Q8NCU4 936 aa27.42■■□□□ 1.98
LRRC1-203ENST00000487251 SNX14Q9Y5W7 946 aa27.42■■□□□ 1.98
LRRC1-203ENST00000487251 EXOC5O00471 708 aa27.42■■□□□ 1.98
LRRC1-203ENST00000487251 KIAA1211Q6ZU35 1233 aa27.42■■□□□ 1.98
LRRC1-203ENST00000487251 CCDC9Q9Y3X0 531 aaKnown RBP27.42■■□□□ 1.98
LRRC1-203ENST00000487251 BCL9O00512 1426 aa27.42■■□□□ 1.98
LRRC1-203ENST00000487251 TRAK2O60296 914 aa27.41■■□□□ 1.98
LRRC1-203ENST00000487251 IL17RAQ96F46 866 aa27.41■■□□□ 1.98
LRRC1-203ENST00000487251 ZNF594Q96JF6 807 aaPredicted RBP27.41■■□□□ 1.98
LRRC1-203ENST00000487251 NMIQ13287 307 aaPredicted RBP27.4■■□□□ 1.98
LRRC1-203ENST00000487251 DBNDD2Q9BQY9 259 aa27.4■■□□□ 1.98
LRRC1-203ENST00000487251 DOT1LQ8TEK3 1739 aa27.39■■□□□ 1.98
LRRC1-203ENST00000487251 DDX11L8A8MPP1 907 aa27.39■■□□□ 1.97
LRRC1-203ENST00000487251 RUFY2Q8WXA3 655 aa27.39■■□□□ 1.97
LRRC1-203ENST00000487251 GBP4Q96PP9 640 aa27.39■■□□□ 1.97
LRRC1-203ENST00000487251 FSD1Q9BTV5 496 aa27.39■■□□□ 1.97
LRRC1-203ENST00000487251 ISCA1Q9BUE6 129 aa27.39■■□□□ 1.97
LRRC1-203ENST00000487251 EPB41L2O43491 1005 aaKnown RBP27.38■■□□□ 1.97
LRRC1-203ENST00000487251 ATG9AQ7Z3C6 839 aa27.38■■□□□ 1.97
LRRC1-203ENST00000487251 VSIG10Q8N0Z9 540 aa27.38■■□□□ 1.97
LRRC1-203ENST00000487251 TCIRG1Q13488 830 aa27.38■■□□□ 1.97
LRRC1-203ENST00000487251 A0A0D9SFI3 127 aa27.37■■□□□ 1.97
LRRC1-203ENST00000487251 NUTM2BA6NNL0 878 aaPredicted RBP27.37■■□□□ 1.97
LRRC1-203ENST00000487251 NUTM2EB1AL46 878 aaPredicted RBP27.37■■□□□ 1.97
LRRC1-203ENST00000487251 NUTM2AQ8IVF1 878 aaPredicted RBP27.37■■□□□ 1.97
LRRC1-203ENST00000487251 STARD3NLO95772 234 aa27.37■■□□□ 1.97
LRRC1-203ENST00000487251 CPA1P15085 419 aa27.37■■□□□ 1.97
LRRC1-203ENST00000487251 PRIM1P49642 420 aaKnown RBP27.37■■□□□ 1.97
LRRC1-203ENST00000487251 LRRC24Q50LG9 513 aa27.37■■□□□ 1.97
LRRC1-203ENST00000487251 A0A0G2JS52 829 aa27.36■■□□□ 1.97
LRRC1-203ENST00000487251 CLCN1P35523 988 aa27.36■■□□□ 1.97
LRRC1-203ENST00000487251 NAP1L5Q96NT1 182 aaPredicted RBP27.36■■□□□ 1.97
LRRC1-203ENST00000487251 CCDC85AQ96PX6 553 aaPredicted RBP27.36■■□□□ 1.97
LRRC1-203ENST00000487251 TEX13AQ9BXU3 409 aaPredicted RBP27.36■■□□□ 1.97
LRRC1-203ENST00000487251 HLFQ16534 295 aa27.36■■□□□ 1.97
LRRC1-203ENST00000487251 NRAPQ86VF7 1730 aa27.36■■□□□ 1.97
LRRC1-203ENST00000487251 CHGBP05060 677 aa27.35■■□□□ 1.97
LRRC1-203ENST00000487251 CYP2E1P05181 493 aaPredicted RBP27.35■■□□□ 1.97
LRRC1-203ENST00000487251 KIF6Q6ZMV9 814 aa27.35■■□□□ 1.97
LRRC1-203ENST00000487251 FAM89AQ96GI7 184 aa27.35■■□□□ 1.97
LRRC1-203ENST00000487251 LARP6Q9BRS8 491 aaKnown RBP27.35■■□□□ 1.97
LRRC1-203ENST00000487251 PIP4K2BP78356 416 aa27.35■■□□□ 1.97
LRRC1-203ENST00000487251 PRPF40BQ6NWY9 871 aaKnown RBP27.35■■□□□ 1.97
LRRC1-203ENST00000487251 SYNE4Q8N205 404 aa27.35■■□□□ 1.97
LRRC1-203ENST00000487251 PUS3Q9BZE2 481 aaKnown RBP27.34■■□□□ 1.97
LRRC1-203ENST00000487251 ZBTB1Q9Y2K1 713 aa27.34■■□□□ 1.97
LRRC1-203ENST00000487251 CYP19A1P11511 503 aaPredicted RBP27.34■■□□□ 1.97
LRRC1-203ENST00000487251 MCM2P49736 904 aa27.34■■□□□ 1.97
LRRC1-203ENST00000487251 CWC22Q9HCG8 908 aaKnown RBP27.34■■□□□ 1.97
LRRC1-203ENST00000487251 ZDHHC9Q9Y397 364 aa27.34■■□□□ 1.97
LRRC1-203ENST00000487251 LRP6O75581 1613 aa27.34■■□□□ 1.97
LRRC1-203ENST00000487251 BAG4O95429 457 aaKnown RBP27.33■■□□□ 1.97
LRRC1-203ENST00000487251 ATP5JP18859 108 aa27.33■■□□□ 1.97
LRRC1-203ENST00000487251 GPTP24298 496 aa27.33■■□□□ 1.97
LRRC1-203ENST00000487251 DNAJC2Q99543 621 aaKnown RBP27.33■■□□□ 1.97
LRRC1-203ENST00000487251 CCDC171Q6TFL3 1326 aa27.33■■□□□ 1.97
LRRC1-203ENST00000487251 ADCK5Q3MIX3 580 aa27.33■■□□□ 1.97
LRRC1-203ENST00000487251 TIMM10P62072 90 aa27.32■■□□□ 1.96
LRRC1-203ENST00000487251 NUCB2P80303 420 aa27.32■■□□□ 1.96
LRRC1-203ENST00000487251 NEUROD6Q96NK8 337 aa27.32■■□□□ 1.96
LRRC1-203ENST00000487251 SPATA31A1Q5TZJ5 1347 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms