RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 FAM50AQ14320 339 aaKnown RBP9.35□□□□□ -0.91
RTFDC1-209ENST00000487211 SETBP1Q9Y6X0 1596 aa9.35□□□□□ -0.91
RTFDC1-209ENST00000487211 MAGI2Q86UL8 1455 aa9.34□□□□□ -0.91
RTFDC1-209ENST00000487211 MLH3Q9UHC1 1453 aa9.34□□□□□ -0.91
RTFDC1-209ENST00000487211 FAM187AA6NFU0 413 aa9.34□□□□□ -0.91
RTFDC1-209ENST00000487211 NAA30Q147X3 362 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-209ENST00000487211 NBPF15Q8N660 670 aa9.34□□□□□ -0.91
RTFDC1-209ENST00000487211 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
RTFDC1-209ENST00000487211 FHDC1Q9C0D6 1143 aaPredicted RBP9.34□□□□□ -0.91
RTFDC1-209ENST00000487211 USP3Q9Y6I4 520 aa9.34□□□□□ -0.91
RTFDC1-209ENST00000487211 ARID4BQ4LE39 1312 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 ZNF335Q9H4Z2 1342 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 KDM5CP41229 1560 aa9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 ZMYM4Q5VZL5 1548 aa9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 GTF3C2Q8WUA4 911 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 ANO2Q9NQ90 1003 aa9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 IQSEC3Q9UPP2 1182 aaPredicted RBP9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 ATP10AO60312 1499 aa9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 TCOF1Q13428 1488 aaKnown RBP9.33□□□□□ -0.92
RTFDC1-209ENST00000487211 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 ABCC5O15440 1437 aa9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 SOWAHDA6NJG2 315 aa9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 UPP2O95045 317 aa9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 GTF2E1P29083 439 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 ZNF211Q13398 564 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 CCDC27Q2M243 656 aa9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 COL26A1Q96A83 441 aa9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 ZSCAN10Q96SZ4 725 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 C2orf49Q9BVC5 232 aaPredicted RBP9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 CABP1Q9NZU7 370 aa9.32□□□□□ -0.92
RTFDC1-209ENST00000487211 ZFYVE16Q7Z3T8 1539 aa9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 PIP4K2BP78356 416 aa9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 MLECQ14165 292 aa9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 SLC27A3Q5K4L6 730 aa9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 TMEM214Q6NUQ4 689 aaKnown RBP9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 INSM2Q96T92 566 aaPredicted RBP9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 POLMQ9NP87 494 aaPredicted RBP9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.31□□□□□ -0.922e-6■■■■■ 149.1
RTFDC1-209ENST00000487211 BIN2Q9UBW5 565 aaPredicted RBP9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 EGFL7Q9UHF1 273 aa9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 PTPN23Q9H3S7 1636 aa9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 RTEL1-TNFRSF6BF6WH68 1400 aa9.31□□□□□ -0.92
RTFDC1-209ENST00000487211 CCDC141Q6ZP82 1450 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 SERTM1A2A2V5 107 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 H3BRB1 525 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 SPINT1O43278 529 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 ITGAEP38570 1179 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 STAG2Q8N3U4 1231 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 TUT1Q9H6E5 874 aaKnown RBP9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 RRP7BPQ9NSQ0 103 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 ZNF232Q9UNY5 417 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 DNMT3AQ9Y6K1 912 aaPredicted RBP9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 PTPRKQ15262 1439 aa9.3□□□□□ -0.92
RTFDC1-209ENST00000487211 KIDINS220Q9ULH0 1771 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 BMP2P12643 396 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 GPC1P35052 558 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 GLYCTKQ8IVS8 523 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 PARP3Q9Y6F1 533 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 FER1L4A9Z1Z3 1794 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 DAPK1P53355 1430 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 ARHGEF5Q12774 1597 aa9.29□□□□□ -0.92
RTFDC1-209ENST00000487211 DHX29Q7Z478 1369 aaKnown RBP9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 ICMTO60725 284 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 NOS2P35228 1153 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 RNF144AP50876 292 aaPredicted RBP9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 MTMR3Q13615 1198 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 TEAD4Q15561 434 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 GNASQ5JWF2 1037 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 SH3PXD2AQ5TCZ1 1133 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 ZDHHC1Q8WTX9 485 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 NGLY1Q96IV0 654 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 NIFKQ9BYG3 293 aaKnown RBP9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 GRIP2Q9C0E4 1043 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 C9orf84Q5VXU9 1444 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 DIP2CQ9Y2E4 1556 aa9.28□□□□□ -0.92
RTFDC1-209ENST00000487211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 ATP7AQ04656 1500 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 ARHGEF40Q8TER5 1519 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 CTSOP43234 321 aaPredicted RBP9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 MRPL14Q6P1L8 145 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 C16orf46Q6P387 395 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 GGT6Q6P531 493 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 HELQQ8TDG4 1101 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 RHBDD1Q8TEB9 315 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 SAP130Q9H0E3 1048 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 HCN4Q9Y3Q4 1203 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 RRBP1Q9P2E9 1410 aaKnown RBP9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 A2MP01023 1474 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 ABCA6Q8N139 1617 aa9.27□□□□□ -0.93
RTFDC1-209ENST00000487211 EML1O00423 815 aa9.26□□□□□ -0.93
RTFDC1-209ENST00000487211 KIF3BO15066 747 aa9.26□□□□□ -0.93
RTFDC1-209ENST00000487211 GFRA3O60609 400 aa9.26□□□□□ -0.93
RTFDC1-209ENST00000487211 AVPP01185 164 aa9.26□□□□□ -0.93
RTFDC1-209ENST00000487211 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
RTFDC1-209ENST00000487211 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms