RNA–Protein interactions for RNA: ENST00000486967.5

FAM228B-204, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-204ENST00000486967 NHSQ6T4R5 1651 aa8.52□□□□□ -1.05
FAM228B-204ENST00000486967 SMPD1P17405 629 aa8.51□□□□□ -1.05
FAM228B-204ENST00000486967 BEGAINQ9BUH8 593 aa8.51□□□□□ -1.05
FAM228B-204ENST00000486967 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
FAM228B-204ENST00000486967 CASP8AP2Q9UKL3 1982 aa8.51□□□□□ -1.05
FAM228B-204ENST00000486967 WNT7BP56706 349 aa8.5□□□□□ -1.05
FAM228B-204ENST00000486967 SLC27A3Q5K4L6 730 aa8.5□□□□□ -1.05
FAM228B-204ENST00000486967 COL23A1Q86Y22 540 aaPredicted RBP8.5□□□□□ -1.05
FAM228B-204ENST00000486967 HLA-CQ95604 372 aa8.5□□□□□ -1.05
FAM228B-204ENST00000486967 BCS1LQ9Y276 419 aa8.5□□□□□ -1.05
FAM228B-204ENST00000486967 TRPM1Q7Z4N2 1603 aa8.5□□□□□ -1.05
FAM228B-204ENST00000486967 ANKRD30BQ9BXX2 1392 aa8.49□□□□□ -1.05
FAM228B-204ENST00000486967 SNX27Q96L92 541 aa8.49□□□□□ -1.05
FAM228B-204ENST00000486967 FAM217BQ9NTX9 383 aaPredicted RBP8.49□□□□□ -1.05
FAM228B-204ENST00000486967 RNF181Q9P0P0 153 aa8.49□□□□□ -1.05
FAM228B-204ENST00000486967 CLTCL1P53675 1640 aa8.49□□□□□ -1.05
FAM228B-204ENST00000486967 PIK3C2AO00443 1686 aa8.49□□□□□ -1.05
FAM228B-204ENST00000486967 UNC80Q8N2C7 3258 aa8.49□□□□□ -1.05
FAM228B-204ENST00000486967 MKI67P46013 3256 aaKnown RBP8.48□□□□□ -1.05
FAM228B-204ENST00000486967 EEA1Q15075 1411 aa8.48□□□□□ -1.05
FAM228B-204ENST00000486967 JUNDP17535 347 aa8.48□□□□□ -1.05
FAM228B-204ENST00000486967 ZC3H6P61129 1189 aaKnown RBP8.48□□□□□ -1.05
FAM228B-204ENST00000486967 RC3H1Q5TC82 1133 aaKnown RBP8.48□□□□□ -1.05
FAM228B-204ENST00000486967 COL25A1Q9BXS0 654 aaPredicted RBP8.48□□□□□ -1.05
FAM228B-204ENST00000486967 SENP2Q9HC62 589 aa8.48□□□□□ -1.05
FAM228B-204ENST00000486967 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
FAM228B-204ENST00000486967 LMO7Q8WWI1 1683 aa8.48□□□□□ -1.05
FAM228B-204ENST00000486967 WDR33Q9C0J8 1336 aaKnown RBP8.48□□□□□ -1.05
FAM228B-204ENST00000486967 BTAF1O14981 1849 aa8.47□□□□□ -1.05
FAM228B-204ENST00000486967 CRB1P82279 1406 aa8.47□□□□□ -1.05
FAM228B-204ENST00000486967 SPATA31E1Q6ZUB1 1445 aa8.47□□□□□ -1.05
FAM228B-204ENST00000486967 RASSF10A6NK89 507 aa8.47□□□□□ -1.05
FAM228B-204ENST00000486967 J3QL48 77 aa8.47□□□□□ -1.05
FAM228B-204ENST00000486967 UBTFP17480 764 aaKnown RBP8.47□□□□□ -1.05
FAM228B-204ENST00000486967 ZNF326Q5BKZ1 582 aaKnown RBP8.47□□□□□ -1.05
FAM228B-204ENST00000486967 ATP13A2Q9NQ11 1180 aa8.47□□□□□ -1.05
FAM228B-204ENST00000486967 THSD7BQ9C0I4 1608 aa8.47□□□□□ -1.05
FAM228B-204ENST00000486967 KNDC1Q76NI1 1749 aa8.46□□□□□ -1.05
FAM228B-204ENST00000486967 TRIOBPQ9H2D6 2365 aa8.46□□□□□ -1.06
FAM228B-204ENST00000486967 TMEM88BA6NKF7 163 aa8.46□□□□□ -1.06
FAM228B-204ENST00000486967 WFS1O76024 890 aa8.46□□□□□ -1.06
FAM228B-204ENST00000486967 GUCA2AQ02747 115 aa8.46□□□□□ -1.06
FAM228B-204ENST00000486967 RETREG3Q86VR2 466 aa8.46□□□□□ -1.06
FAM228B-204ENST00000486967 PASKQ96RG2 1323 aa8.46□□□□□ -1.06
FAM228B-204ENST00000486967 PRR36Q9H6K5 1346 aa8.46□□□□□ -1.06
FAM228B-204ENST00000486967 ZC3H4Q9UPT8 1303 aaKnown RBP8.46□□□□□ -1.06
FAM228B-204ENST00000486967 LTBP1Q14766 1721 aa8.46□□□□□ -1.06
FAM228B-204ENST00000486967 COL18A1P39060 1754 aa8.45□□□□□ -1.06
FAM228B-204ENST00000486967 WNK3Q9BYP7 1800 aa8.45□□□□□ -1.06
FAM228B-204ENST00000486967 GLTPD2A6NH11 291 aa8.45□□□□□ -1.06
FAM228B-204ENST00000486967 PLA2G5P39877 138 aa8.45□□□□□ -1.06
FAM228B-204ENST00000486967 DEFB115Q30KQ5 88 aa8.45□□□□□ -1.06
FAM228B-204ENST00000486967 NUDT12Q9BQG2 462 aa8.45□□□□□ -1.06
FAM228B-204ENST00000486967 USP6P35125 1406 aa8.45□□□□□ -1.06
FAM228B-204ENST00000486967 COL5A2P05997 1499 aaPredicted RBP8.45□□□□□ -1.06
FAM228B-204ENST00000486967 C6orf229H3BNL8 230 aa8.44□□□□□ -1.06
FAM228B-204ENST00000486967 ALDH1A1P00352 501 aa8.44□□□□□ -1.06
FAM228B-204ENST00000486967 SKOR1P84550 965 aa8.44□□□□□ -1.06
FAM228B-204ENST00000486967 LCE2AQ5TA79 106 aaPredicted RBP8.44□□□□□ -1.06
FAM228B-204ENST00000486967 WAPLQ7Z5K2 1190 aa8.44□□□□□ -1.06
FAM228B-204ENST00000486967 SYMPKQ92797 1274 aaKnown RBP8.44□□□□□ -1.06
FAM228B-204ENST00000486967 HPS1Q92902 700 aa8.44□□□□□ -1.06
FAM228B-204ENST00000486967 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
FAM228B-204ENST00000486967 ACSBG1Q96GR2 724 aa8.44□□□□□ -1.06
FAM228B-204ENST00000486967 CDCA7Q9BWT1 371 aaPredicted RBP8.44□□□□□ -1.06
FAM228B-204ENST00000486967 GPRASP1Q5JY77 1395 aa8.44□□□□□ -1.06
FAM228B-204ENST00000486967 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
FAM228B-204ENST00000486967 FDX1P10109 184 aa8.43□□□□□ -1.06
FAM228B-204ENST00000486967 EHBP1Q8NDI1 1231 aa8.43□□□□□ -1.06
FAM228B-204ENST00000486967 TRIM47Q96LD4 638 aa8.43□□□□□ -1.06
FAM228B-204ENST00000486967 E9PCH4 1651 aa8.43□□□□□ -1.06
FAM228B-204ENST00000486967 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
FAM228B-204ENST00000486967 KIAA1551Q9HCM1 1747 aa8.43□□□□□ -1.06
FAM228B-204ENST00000486967 SBF1O95248 1867 aa8.43□□□□□ -1.06
FAM228B-204ENST00000486967 CA12O43570 354 aa8.42□□□□□ -1.06
FAM228B-204ENST00000486967 VCANP13611 3396 aa8.42□□□□□ -1.06
FAM228B-204ENST00000486967 ARFGEF1Q9Y6D6 1849 aa8.41□□□□□ -1.06
FAM228B-204ENST00000486967 N4BP2Q86UW6 1770 aaPredicted RBP8.41□□□□□ -1.06
FAM228B-204ENST00000486967 MYOM3Q5VTT5 1437 aa8.41□□□□□ -1.06
FAM228B-204ENST00000486967 CPDO75976 1380 aa8.41□□□□□ -1.06
FAM228B-204ENST00000486967 MS4A1P11836 297 aa8.41□□□□□ -1.06
FAM228B-204ENST00000486967 TTLL12Q14166 644 aaPredicted RBP8.41□□□□□ -1.06
FAM228B-204ENST00000486967 PLEKHH1Q9ULM0 1364 aa8.4□□□□□ -1.06
FAM228B-204ENST00000486967 ACIN1Q9UKV3 1341 aaKnown RBP8.4□□□□□ -1.06
FAM228B-204ENST00000486967 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
FAM228B-204ENST00000486967 SNRPBP14678 240 aaKnown RBP8.4□□□□□ -1.06
FAM228B-204ENST00000486967 SSTR3P32745 418 aaPredicted RBP8.4□□□□□ -1.06
FAM228B-204ENST00000486967 KCNQ4P56696 695 aa8.4□□□□□ -1.06
FAM228B-204ENST00000486967 TGFB2P61812 414 aa8.4□□□□□ -1.06
FAM228B-204ENST00000486967 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.4□□□□□ -1.06
FAM228B-204ENST00000486967 FAM122AQ96E09 287 aa8.4□□□□□ -1.06
FAM228B-204ENST00000486967 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
FAM228B-204ENST00000486967 KIF13BQ9NQT8 1826 aa8.4□□□□□ -1.07
FAM228B-204ENST00000486967 BRCA1P38398 1863 aaKnown RBP8.39□□□□□ -1.07
FAM228B-204ENST00000486967 EXOC5O00471 708 aa8.39□□□□□ -1.07
FAM228B-204ENST00000486967 NFX1Q12986 1120 aaKnown RBP8.39□□□□□ -1.07
FAM228B-204ENST00000486967 KAT6BQ8WYB5 2073 aa8.39□□□□□ -1.07
FAM228B-204ENST00000486967 A0A0G2JLW4 131 aa8.38□□□□□ -1.07
FAM228B-204ENST00000486967 INSM1Q01101 510 aaPredicted RBP8.38□□□□□ -1.07
FAM228B-204ENST00000486967 PTPRNQ16849 979 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms