RNA–Protein interactions for RNA: ENST00000486943.1

CACNA1F-206, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 3

Gene CACNA1F, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-206ENST00000486943 C7orf43Q8WVR3 580 aa18.67■□□□□ 0.58
CACNA1F-206ENST00000486943 TAOK3Q9H2K8 898 aa18.67■□□□□ 0.58
CACNA1F-206ENST00000486943 ZNF219Q9P2Y4 722 aaPredicted RBP18.67■□□□□ 0.58
CACNA1F-206ENST00000486943 CCDC93Q567U6 631 aa18.66■□□□□ 0.58
CACNA1F-206ENST00000486943 NMRK2Q9NPI5 230 aa18.66■□□□□ 0.58
CACNA1F-206ENST00000486943 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
CACNA1F-206ENST00000486943 HYPKQ9NX55 129 aa18.65■□□□□ 0.58
CACNA1F-206ENST00000486943 WDR90Q96KV7 1748 aa18.64■□□□□ 0.57
CACNA1F-206ENST00000486943 TOMM70O94826 608 aa18.64■□□□□ 0.57
CACNA1F-206ENST00000486943 HOXA10P31260 410 aaPredicted RBP18.64■□□□□ 0.57
CACNA1F-206ENST00000486943 TCIRG1Q13488 830 aa18.64■□□□□ 0.57
CACNA1F-206ENST00000486943 PLBD2Q8NHP8 589 aa18.64■□□□□ 0.57
CACNA1F-206ENST00000486943 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
CACNA1F-206ENST00000486943 UTP14AQ9BVJ6 771 aaKnown RBP18.64■□□□□ 0.57
CACNA1F-206ENST00000486943 CHMP4AQ9BY43 222 aa18.64■□□□□ 0.57
CACNA1F-206ENST00000486943 GLTPD2A6NH11 291 aa18.63■□□□□ 0.57
CACNA1F-206ENST00000486943 SLC10A5Q5PT55 438 aa18.63■□□□□ 0.57
CACNA1F-206ENST00000486943 DDX60Q8IY21 1712 aaKnown RBP18.63■□□□□ 0.57
CACNA1F-206ENST00000486943 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
CACNA1F-206ENST00000486943 RTKN2Q8IZC4 609 aa18.62■□□□□ 0.57
CACNA1F-206ENST00000486943 SNED1Q8TER0 1413 aa18.61■□□□□ 0.57
CACNA1F-206ENST00000486943 IL16Q14005 1332 aa18.61■□□□□ 0.57
CACNA1F-206ENST00000486943 CC2D2BQ6DHV5 1058 aa18.61■□□□□ 0.57
CACNA1F-206ENST00000486943 ANKRD13DQ6ZTN6 518 aa18.61■□□□□ 0.57
CACNA1F-206ENST00000486943 WWC1Q8IX03 1113 aa18.61■□□□□ 0.57
CACNA1F-206ENST00000486943 RBM17Q96I25 401 aaKnown RBP18.61■□□□□ 0.57
CACNA1F-206ENST00000486943 NLRP3Q96P20 1036 aa18.61■□□□□ 0.57
CACNA1F-206ENST00000486943 CRAMP1Q96RY5 1269 aa18.61■□□□□ 0.57
CACNA1F-206ENST00000486943 FKBP4Q02790 459 aaKnown RBP eCLIP18.6■□□□□ 0.57
CACNA1F-206ENST00000486943 DPY19L2Q6NUT2 758 aa18.6■□□□□ 0.57
CACNA1F-206ENST00000486943 C16orf71Q8IYS4 520 aaPredicted RBP18.6■□□□□ 0.57
CACNA1F-206ENST00000486943 RBM46Q8TBY0 533 aaKnown RBP18.6■□□□□ 0.57
CACNA1F-206ENST00000486943 CACNA1FO60840 1977 aa18.6■□□□□ 0.57
CACNA1F-206ENST00000486943 SH3TC1Q8TE82 1336 aa18.59■□□□□ 0.57
CACNA1F-206ENST00000486943 HSPA6P17066 643 aa18.59■□□□□ 0.57
CACNA1F-206ENST00000486943 GRIPAP1Q4V328 841 aa18.59■□□□□ 0.57
CACNA1F-206ENST00000486943 C8orf58Q8NAV2 365 aa18.59■□□□□ 0.57
CACNA1F-206ENST00000486943 ISCA1Q9BUE6 129 aa18.58■□□□□ 0.56
CACNA1F-206ENST00000486943 RRAGCQ9HB90 399 aa18.58■□□□□ 0.56
CACNA1F-206ENST00000486943 TRMT112Q9UI30 125 aaKnown RBP18.58■□□□□ 0.56
CACNA1F-206ENST00000486943 ELL2O00472 640 aaPredicted RBP18.57■□□□□ 0.56
CACNA1F-206ENST00000486943 VEGFAP15692 232 aaPredicted RBP18.57■□□□□ 0.56
CACNA1F-206ENST00000486943 GOLGA2Q08379 1002 aa18.57■□□□□ 0.56
CACNA1F-206ENST00000486943 CCDC30Q5VVM6 783 aa18.57■□□□□ 0.56
CACNA1F-206ENST00000486943 C3orf67Q6ZVT6 689 aa18.57■□□□□ 0.56
CACNA1F-206ENST00000486943 PSMD1Q99460 953 aa18.57■□□□□ 0.56
CACNA1F-206ENST00000486943 SCN4AP35499 1836 aa18.57■□□□□ 0.56
CACNA1F-206ENST00000486943 TRIM28Q13263 835 aaKnown RBP18.56■□□□□ 0.56
CACNA1F-206ENST00000486943 OLFM4Q6UX06 510 aa18.56■□□□□ 0.56
CACNA1F-206ENST00000486943 LRRC37AA6NMS7 1700 aa18.55■□□□□ 0.56
CACNA1F-206ENST00000486943 PPEF1O14829 653 aaPredicted RBP18.55■□□□□ 0.56
CACNA1F-206ENST00000486943 FSTL1Q12841 308 aa18.55■□□□□ 0.56
CACNA1F-206ENST00000486943 TSR2Q969E8 191 aaKnown RBP18.55■□□□□ 0.56
CACNA1F-206ENST00000486943 RIC3Q7Z5B4 369 aa18.54■□□□□ 0.56
CACNA1F-206ENST00000486943 WDR63Q8IWG1 891 aa18.54■□□□□ 0.56
CACNA1F-206ENST00000486943 TSPYL6Q8N831 410 aa18.54■□□□□ 0.56
CACNA1F-206ENST00000486943 PHAXQ9H814 394 aaKnown RBP18.54■□□□□ 0.56
CACNA1F-206ENST00000486943 ZNF277Q9NRM2 450 aaPredicted RBP18.54■□□□□ 0.56
CACNA1F-206ENST00000486943 TAF1P21675 1872 aa18.54■□□□□ 0.56
CACNA1F-206ENST00000486943 ABCC4O15439 1325 aa18.53■□□□□ 0.56
CACNA1F-206ENST00000486943 DDX58O95786 925 aaKnown RBP18.53■□□□□ 0.56
CACNA1F-206ENST00000486943 HCLS1P14317 486 aaPredicted RBP18.53■□□□□ 0.56
CACNA1F-206ENST00000486943 IARSP41252 1262 aaKnown RBP18.53■□□□□ 0.56
CACNA1F-206ENST00000486943 SYNE4Q8N205 404 aa18.53■□□□□ 0.56
CACNA1F-206ENST00000486943 ATP5J2-PTCD1G3V325 749 aa18.52■□□□□ 0.56
CACNA1F-206ENST00000486943 BBOX1O75936 387 aa18.52■□□□□ 0.56
CACNA1F-206ENST00000486943 TWISTNBQ3B726 338 aaPredicted RBP18.52■□□□□ 0.56
CACNA1F-206ENST00000486943 SMC1BQ8NDV3 1235 aa18.52■□□□□ 0.56
CACNA1F-206ENST00000486943 STK31Q9BXU1 1019 aa18.52■□□□□ 0.56
CACNA1F-206ENST00000486943 TMX4Q9H1E5 349 aaPredicted RBP18.52■□□□□ 0.56
CACNA1F-206ENST00000486943 ATP6V0A2Q9Y487 856 aa18.52■□□□□ 0.56
CACNA1F-206ENST00000486943 POTECB2RU33 542 aa18.51■□□□□ 0.55
CACNA1F-206ENST00000486943 APLP1P51693 650 aa18.51■□□□□ 0.55
CACNA1F-206ENST00000486943 DDX46Q7L014 1031 aaKnown RBP18.51■□□□□ 0.55
CACNA1F-206ENST00000486943 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
CACNA1F-206ENST00000486943 HSP90B1P14625 803 aaKnown RBP18.5■□□□□ 0.55
CACNA1F-206ENST00000486943 GRAPQ13588 217 aa18.5■□□□□ 0.55
CACNA1F-206ENST00000486943 TMC4Q7Z404 712 aa18.5■□□□□ 0.55
CACNA1F-206ENST00000486943 GRAPLQ8TC17 118 aaPredicted RBP18.5■□□□□ 0.55
CACNA1F-206ENST00000486943 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
CACNA1F-206ENST00000486943 L3MBTL3Q96JM7 780 aaPredicted RBP18.5■□□□□ 0.55
CACNA1F-206ENST00000486943 MYH3P11055 1940 aa18.5■□□□□ 0.55
CACNA1F-206ENST00000486943 FZD9O00144 591 aa18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 DDNO94850 711 aaPredicted RBP18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 SF3B3Q15393 1217 aaKnown RBP18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 SP8Q8IXZ3 490 aa18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 ZBTB38Q8NAP3 1195 aaPredicted RBP18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 JDP2Q8WYK2 163 aa18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 METTL22Q9BUU2 404 aaPredicted RBP18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 COL4A5P29400 1685 aa18.49■□□□□ 0.55
CACNA1F-206ENST00000486943 IQCA1LA6NCM1 817 aa18.48■□□□□ 0.55
CACNA1F-206ENST00000486943 MYD88Q99836 296 aa18.48■□□□□ 0.55
CACNA1F-206ENST00000486943 ZNF541Q9H0D2 1346 aa18.48■□□□□ 0.55
CACNA1F-206ENST00000486943 IRS4O14654 1257 aaPredicted RBP18.47■□□□□ 0.55
CACNA1F-206ENST00000486943 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
CACNA1F-206ENST00000486943 KSR2Q6VAB6 950 aa18.47■□□□□ 0.55
CACNA1F-206ENST00000486943 SUPT20HQ8NEM7 779 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms