RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 NANOS1Q8WY41 292 aaKnown RBP8.57□□□□□ -1.04
LMBR1-218ENST00000486837 EDEM1Q92611 657 aa8.57□□□□□ -1.04
LMBR1-218ENST00000486837 ASB16Q96NS5 453 aa8.57□□□□□ -1.04
LMBR1-218ENST00000486837 BRD7Q9NPI1 651 aa8.57□□□□□ -1.04
LMBR1-218ENST00000486837 POLIQ9UNA4 740 aa8.57□□□□□ -1.04
LMBR1-218ENST00000486837 EFSO43281 561 aa8.56□□□□□ -1.04
LMBR1-218ENST00000486837 DNM1Q05193 864 aaKnown RBP8.56□□□□□ -1.04
LMBR1-218ENST00000486837 PDE3BQ13370 1112 aa8.56□□□□□ -1.04
LMBR1-218ENST00000486837 DNAJC14Q6Y2X3 702 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-218ENST00000486837 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
LMBR1-218ENST00000486837 NDFIP2Q9NV92 336 aa8.56□□□□□ -1.04
LMBR1-218ENST00000486837 NXF1Q9UBU9 619 aaKnown RBP8.56□□□□□ -1.04
LMBR1-218ENST00000486837 PHF24Q9UPV7 400 aa8.56□□□□□ -1.04
LMBR1-218ENST00000486837 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
LMBR1-218ENST00000486837 TNP2Q05952 138 aa8.55□□□□□ -1.04
LMBR1-218ENST00000486837 EHHADHQ08426 723 aa8.55□□□□□ -1.04
LMBR1-218ENST00000486837 FOXR1Q6PIV2 292 aa8.55□□□□□ -1.04
LMBR1-218ENST00000486837 GJD3Q8N144 294 aa8.55□□□□□ -1.04
LMBR1-218ENST00000486837 NUDT16Q96DE0 195 aaKnown RBP8.55□□□□□ -1.04
LMBR1-218ENST00000486837 FAM129BQ96TA1 746 aa8.55□□□□□ -1.04
LMBR1-218ENST00000486837 CFHR5Q9BXR6 569 aa8.55□□□□□ -1.04
LMBR1-218ENST00000486837 ATXN7L1Q9ULK2 861 aaPredicted RBP8.55□□□□□ -1.04
LMBR1-218ENST00000486837 FNDC3AQ9Y2H6 1198 aaKnown RBP8.55□□□□□ -1.04
LMBR1-218ENST00000486837 KHNYNO15037 678 aaKnown RBP8.54□□□□□ -1.04
LMBR1-218ENST00000486837 MAPTP10636 758 aaKnown RBP8.54□□□□□ -1.04
LMBR1-218ENST00000486837 ZNF787Q6DD87 383 aa8.54□□□□□ -1.04
LMBR1-218ENST00000486837 SV2AQ7L0J3 742 aa8.54□□□□□ -1.04
LMBR1-218ENST00000486837 TTC16Q8NEE8 873 aa8.54□□□□□ -1.04
LMBR1-218ENST00000486837 GTPBP3Q969Y2 492 aaKnown RBP8.54□□□□□ -1.04
LMBR1-218ENST00000486837 DMRTB1Q96MA1 342 aa8.54□□□□□ -1.04
LMBR1-218ENST00000486837 TRERF1Q96PN7 1200 aa8.54□□□□□ -1.04
LMBR1-218ENST00000486837 KCNH4Q9UQ05 1017 aa8.54□□□□□ -1.04
LMBR1-218ENST00000486837 DCDC2BA2VCK2 349 aa8.53□□□□□ -1.04
LMBR1-218ENST00000486837 CDC14CA4D256 554 aa8.53□□□□□ -1.04
LMBR1-218ENST00000486837 BNIP3LO60238 219 aa8.53□□□□□ -1.04
LMBR1-218ENST00000486837 EGFRP00533 1210 aa8.53□□□□□ -1.04
LMBR1-218ENST00000486837 GRNP28799 593 aaKnown RBP8.53□□□□□ -1.04
LMBR1-218ENST00000486837 RGS22Q8NE09 1264 aa8.53□□□□□ -1.04
LMBR1-218ENST00000486837 KCNMB2Q9Y691 235 aa8.53□□□□□ -1.04
LMBR1-218ENST00000486837 COL19A1Q14993 1142 aa8.52□□□□□ -1.05
LMBR1-218ENST00000486837 FAM182BQ5T319 152 aa8.52□□□□□ -1.05
LMBR1-218ENST00000486837 TMC7Q7Z402 723 aa8.52□□□□□ -1.05
LMBR1-218ENST00000486837 CMTR1Q8N1G2 835 aaKnown RBP8.52□□□□□ -1.05
LMBR1-218ENST00000486837 VWA5B2Q8N398 1253 aa8.52□□□□□ -1.05
LMBR1-218ENST00000486837 MARK1Q9P0L2 795 aa8.52□□□□□ -1.05
LMBR1-218ENST00000486837 ANKRD33BA6NCL7 494 aa8.51□□□□□ -1.05
LMBR1-218ENST00000486837 IGHA2P01877 340 aa8.51□□□□□ -1.05
LMBR1-218ENST00000486837 SFSWAPQ12872 951 aaKnown RBP8.51□□□□□ -1.05
LMBR1-218ENST00000486837 PDE12Q6L8Q7 609 aaKnown RBP8.51□□□□□ -1.05
LMBR1-218ENST00000486837 XKR5Q6UX68 686 aa8.51□□□□□ -1.05
LMBR1-218ENST00000486837 TMC1Q8TDI8 760 aa8.51□□□□□ -1.05
LMBR1-218ENST00000486837 ALKBH8Q96BT7 664 aaKnown RBP8.51□□□□□ -1.05
LMBR1-218ENST00000486837 ABHD17AQ96GS6 310 aa8.51□□□□□ -1.05
LMBR1-218ENST00000486837 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
LMBR1-218ENST00000486837 UBAP1LF5GYI3 381 aa8.5□□□□□ -1.05
LMBR1-218ENST00000486837 H3BM21 787 aa8.5□□□□□ -1.05
LMBR1-218ENST00000486837 FGFR3P22607 806 aa8.5□□□□□ -1.05
LMBR1-218ENST00000486837 TRIP4Q15650 581 aaPredicted RBP8.5□□□□□ -1.05
LMBR1-218ENST00000486837 C8orf34Q49A92 452 aa8.5□□□□□ -1.05
LMBR1-218ENST00000486837 GGNBP2Q9H3C7 697 aa8.5□□□□□ -1.05
LMBR1-218ENST00000486837 USP20Q9Y2K6 914 aa8.5□□□□□ -1.05
LMBR1-218ENST00000486837 TREHO43280 583 aa8.49□□□□□ -1.05
LMBR1-218ENST00000486837 XYLBO75191 536 aa8.49□□□□□ -1.05
LMBR1-218ENST00000486837 CCINQ13939 588 aa8.49□□□□□ -1.05
LMBR1-218ENST00000486837 NPAS4Q8IUM7 802 aa8.49□□□□□ -1.05
LMBR1-218ENST00000486837 STRN4Q9NRL3 753 aa8.49□□□□□ -1.05
LMBR1-218ENST00000486837 GPR182O15218 404 aa8.48□□□□□ -1.05
LMBR1-218ENST00000486837 NEFLP07196 543 aa8.48□□□□□ -1.05
LMBR1-218ENST00000486837 VSIG8P0DPA2 414 aa8.48□□□□□ -1.05
LMBR1-218ENST00000486837 DSC3Q14574 896 aa8.48□□□□□ -1.05
LMBR1-218ENST00000486837 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
LMBR1-218ENST00000486837 HCN2Q9UL51 889 aa8.48□□□□□ -1.05
LMBR1-218ENST00000486837 AMOTL2Q9Y2J4 779 aa8.48□□□□□ -1.05
LMBR1-218ENST00000486837 GPR25O00155 361 aa8.47□□□□□ -1.05
LMBR1-218ENST00000486837 PLCB3Q01970 1234 aa8.47□□□□□ -1.05
LMBR1-218ENST00000486837 FMR1Q06787 632 aaKnown RBP eCLIP8.47□□□□□ -1.052e-7■■■■■ 32.4
LMBR1-218ENST00000486837 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
LMBR1-218ENST00000486837 SLC16A10Q8TF71 515 aa8.47□□□□□ -1.05
LMBR1-218ENST00000486837 TERTO14746 1132 aaKnown RBP8.46□□□□□ -1.06
LMBR1-218ENST00000486837 CD33P20138 364 aa8.46□□□□□ -1.06
LMBR1-218ENST00000486837 VEGFBP49765 207 aa8.46□□□□□ -1.06
LMBR1-218ENST00000486837 SPEM2Q0P670 501 aa8.46□□□□□ -1.06
LMBR1-218ENST00000486837 ZNF438Q7Z4V0 828 aa8.46□□□□□ -1.06
LMBR1-218ENST00000486837 A6NHS1 94 aa8.45□□□□□ -1.06
LMBR1-218ENST00000486837 NIF3L1Q9GZT8 377 aa8.45□□□□□ -1.06
LMBR1-218ENST00000486837 ELP3Q9H9T3 547 aa8.45□□□□□ -1.06
LMBR1-218ENST00000486837 TNFRSF21O75509 655 aa8.44□□□□□ -1.06
LMBR1-218ENST00000486837 NEUROD1Q13562 356 aa8.44□□□□□ -1.06
LMBR1-218ENST00000486837 SNX29Q8TEQ0 813 aa8.44□□□□□ -1.06
LMBR1-218ENST00000486837 PNMA5Q96PV4 448 aa8.44□□□□□ -1.06
LMBR1-218ENST00000486837 AVENQ9NQS1 362 aaPredicted RBP8.44□□□□□ -1.06
LMBR1-218ENST00000486837 ABI2Q9NYB9 513 aaPredicted RBP8.44□□□□□ -1.06
LMBR1-218ENST00000486837 SASH3O75995 380 aa8.43□□□□□ -1.06
LMBR1-218ENST00000486837 MX2P20592 715 aa8.43□□□□□ -1.06
LMBR1-218ENST00000486837 FGD1P98174 961 aa8.43□□□□□ -1.06
LMBR1-218ENST00000486837 CTBSQ01459 385 aa8.43□□□□□ -1.06
LMBR1-218ENST00000486837 GAS6Q14393 721 aa8.43□□□□□ -1.06
LMBR1-218ENST00000486837 GRIN2CQ14957 1233 aa8.43□□□□□ -1.06
LMBR1-218ENST00000486837 EAPPQ56P03 285 aaPredicted RBP8.43□□□□□ -1.06
LMBR1-218ENST00000486837 GPR161Q8N6U8 529 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms