RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 PARP10Q53GL7 1025 aa17.47■□□□□ 0.39
NELFCD-209ENST00000486263 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
NELFCD-209ENST00000486263 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
NELFCD-209ENST00000486263 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 NPHP1O15259 732 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 GNAI3P08754 354 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 GYS1P13807 737 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 GCKRQ14397 625 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 TBC1D9BQ66K14 1250 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 PPP1R42Q7Z4L9 355 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 ZNF34Q8IZ26 560 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 EXOC6Q8TAG9 804 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 HDAC5Q9UQL6 1122 aa17.46■□□□□ 0.39
NELFCD-209ENST00000486263 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
NELFCD-209ENST00000486263 GRM8O00222 908 aa17.45■□□□□ 0.38
NELFCD-209ENST00000486263 MSL1Q68DK7 614 aa17.45■□□□□ 0.38
NELFCD-209ENST00000486263 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
NELFCD-209ENST00000486263 C4AP0C0L4 1744 aa17.44■□□□□ 0.38
NELFCD-209ENST00000486263 BCORQ6W2J9 1755 aa17.44■□□□□ 0.38
NELFCD-209ENST00000486263 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
NELFCD-209ENST00000486263 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
NELFCD-209ENST00000486263 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
NELFCD-209ENST00000486263 UTP14AQ9BVJ6 771 aaKnown RBP17.44■□□□□ 0.38
NELFCD-209ENST00000486263 TRMT112Q9UI30 125 aaKnown RBP17.44■□□□□ 0.38
NELFCD-209ENST00000486263 SCN7AQ01118 1682 aa17.44■□□□□ 0.38
NELFCD-209ENST00000486263 NUP98P52948 1817 aa17.44■□□□□ 0.38
NELFCD-209ENST00000486263 AAMPQ13685 434 aa17.43■□□□□ 0.38
NELFCD-209ENST00000486263 MEIS3Q99687 375 aa17.43■□□□□ 0.38
NELFCD-209ENST00000486263 NYXQ9GZU5 481 aa17.43■□□□□ 0.38
NELFCD-209ENST00000486263 USP44Q9H0E7 712 aa17.43■□□□□ 0.38
NELFCD-209ENST00000486263 NFIXQ14938 502 aa17.42■□□□□ 0.38
NELFCD-209ENST00000486263 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
NELFCD-209ENST00000486263 SUSD4Q5VX71 490 aa17.42■□□□□ 0.38
NELFCD-209ENST00000486263 UBE3BQ7Z3V4 1068 aa17.42■□□□□ 0.38
NELFCD-209ENST00000486263 NBPF5PQ86XG9 351 aaPredicted RBP17.42■□□□□ 0.38
NELFCD-209ENST00000486263 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
NELFCD-209ENST00000486263 UBN2Q6ZU65 1347 aa17.42■□□□□ 0.38
NELFCD-209ENST00000486263 GNAI2P04899 355 aa17.41■□□□□ 0.38
NELFCD-209ENST00000486263 PCCAP05165 728 aaPredicted RBP17.41■□□□□ 0.38
NELFCD-209ENST00000486263 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
NELFCD-209ENST00000486263 ERICH6BQ5W0A0 696 aa17.41■□□□□ 0.38
NELFCD-209ENST00000486263 TPTE2Q6XPS3 522 aa17.41■□□□□ 0.38
NELFCD-209ENST00000486263 ZBTB38Q8NAP3 1195 aaPredicted RBP17.41■□□□□ 0.38
NELFCD-209ENST00000486263 AFDNP55196 1824 aaKnown RBP17.41■□□□□ 0.38
NELFCD-209ENST00000486263 CARMIL3Q8ND23 1372 aa17.4■□□□□ 0.38
NELFCD-209ENST00000486263 IBTKQ9P2D0 1353 aaPredicted RBP17.4■□□□□ 0.38
NELFCD-209ENST00000486263 ANKRD36CQ5JPF3 1778 aa17.4■□□□□ 0.38
NELFCD-209ENST00000486263 JARID2Q92833 1246 aaPredicted RBP17.4■□□□□ 0.38
NELFCD-209ENST00000486263 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
NELFCD-209ENST00000486263 PARP3Q9Y6F1 533 aa17.4■□□□□ 0.38
NELFCD-209ENST00000486263 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
NELFCD-209ENST00000486263 H7C1W4 665 aa17.39■□□□□ 0.37
NELFCD-209ENST00000486263 NBPF7P0C2Y1 421 aaPredicted RBP17.39■□□□□ 0.37
NELFCD-209ENST00000486263 TM4SF1P30408 202 aa17.39■□□□□ 0.37
NELFCD-209ENST00000486263 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
NELFCD-209ENST00000486263 UTYO14607 1347 aa17.39■□□□□ 0.37
NELFCD-209ENST00000486263 SH3TC1Q8TE82 1336 aa17.39■□□□□ 0.37
NELFCD-209ENST00000486263 SERPINB2P05120 415 aa17.38■□□□□ 0.37
NELFCD-209ENST00000486263 MMP10P09238 476 aa17.38■□□□□ 0.37
NELFCD-209ENST00000486263 C1orf115Q9H7X2 142 aa17.38■□□□□ 0.37
NELFCD-209ENST00000486263 LRRFIP2Q9Y608 721 aaKnown RBP17.38■□□□□ 0.37
NELFCD-209ENST00000486263 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
NELFCD-209ENST00000486263 NTSR2O95665 410 aa17.37■□□□□ 0.37
NELFCD-209ENST00000486263 ST5P78524 1137 aa17.37■□□□□ 0.37
NELFCD-209ENST00000486263 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
NELFCD-209ENST00000486263 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
NELFCD-209ENST00000486263 CNBD1Q8NA66 436 aa17.37■□□□□ 0.37
NELFCD-209ENST00000486263 SUCLG2Q96I99 432 aa17.36■□□□□ 0.37
NELFCD-209ENST00000486263 CDHR2Q9BYE9 1310 aa17.36■□□□□ 0.37
NELFCD-209ENST00000486263 POLRMTO00411 1230 aaKnown RBP17.35■□□□□ 0.37
NELFCD-209ENST00000486263 ERFEQ4G0M1 354 aa17.35■□□□□ 0.37
NELFCD-209ENST00000486263 PDE8AO60658 829 aa17.34■□□□□ 0.37
NELFCD-209ENST00000486263 HCLS1P14317 486 aaPredicted RBP17.34■□□□□ 0.37
NELFCD-209ENST00000486263 CASP7P55210 303 aa17.34■□□□□ 0.37
NELFCD-209ENST00000486263 DDR1Q08345 913 aa17.34■□□□□ 0.37
NELFCD-209ENST00000486263 SYNE4Q8N205 404 aa17.34■□□□□ 0.37
NELFCD-209ENST00000486263 NLGN2Q8NFZ4 835 aa17.34■□□□□ 0.37
NELFCD-209ENST00000486263 BICC1Q9H694 974 aaKnown RBP17.34■□□□□ 0.37
NELFCD-209ENST00000486263 KIF13BQ9NQT8 1826 aa17.34■□□□□ 0.37
NELFCD-209ENST00000486263 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
NELFCD-209ENST00000486263 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
NELFCD-209ENST00000486263 RPAP2Q8IXW5 612 aaPredicted RBP17.33■□□□□ 0.36
NELFCD-209ENST00000486263 HMMRO75330 724 aa17.32■□□□□ 0.36
NELFCD-209ENST00000486263 PRR5LQ6MZQ0 368 aa17.32■□□□□ 0.36
NELFCD-209ENST00000486263 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
NELFCD-209ENST00000486263 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
NELFCD-209ENST00000486263 PLA2G12BQ9BX93 195 aa17.32■□□□□ 0.36
NELFCD-209ENST00000486263 PPP4R2Q9NY27 417 aa17.32■□□□□ 0.36
NELFCD-209ENST00000486263 CHD4Q14839 1912 aa17.31■□□□□ 0.36
NELFCD-209ENST00000486263 CTSWP56202 376 aa17.31■□□□□ 0.36
NELFCD-209ENST00000486263 TGFB2P61812 414 aa17.31■□□□□ 0.36
NELFCD-209ENST00000486263 LMBR1LQ6UX01 489 aa17.31■□□□□ 0.36
NELFCD-209ENST00000486263 CCDC136Q96JN2 1154 aa17.31■□□□□ 0.36
NELFCD-209ENST00000486263 PCDHB15Q9Y5E8 787 aa17.31■□□□□ 0.36
NELFCD-209ENST00000486263 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
NELFCD-209ENST00000486263 FOXO4P98177 505 aa17.3■□□□□ 0.36
NELFCD-209ENST00000486263 ATP8B2P98198 1209 aa17.3■□□□□ 0.36
NELFCD-209ENST00000486263 GPR162Q16538 588 aa17.3■□□□□ 0.36
NELFCD-209ENST00000486263 CCDC152Q4G0S7 254 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms