RNA–Protein interactions for RNA: ENST00000486239.1

DCLK1-207, Transcript of doublecortin like kinase 1, humanhuman

TSL 3

Gene DCLK1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-207ENST00000486239 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
DCLK1-207ENST00000486239 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
DCLK1-207ENST00000486239 VEGFAP15692 232 aaPredicted RBP17.68■□□□□ 0.42
DCLK1-207ENST00000486239 HOXA10P31260 410 aaPredicted RBP17.68■□□□□ 0.42
DCLK1-207ENST00000486239 APLP1P51693 650 aa17.68■□□□□ 0.42
DCLK1-207ENST00000486239 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
DCLK1-207ENST00000486239 COPS6Q7L5N1 327 aa17.68■□□□□ 0.42
DCLK1-207ENST00000486239 C7orf43Q8WVR3 580 aa17.68■□□□□ 0.42
DCLK1-207ENST00000486239 RBM17Q96I25 401 aaKnown RBP17.68■□□□□ 0.42
DCLK1-207ENST00000486239 UTP14AQ9BVJ6 771 aaKnown RBP17.68■□□□□ 0.42
DCLK1-207ENST00000486239 TMX4Q9H1E5 349 aaPredicted RBP17.68■□□□□ 0.42
DCLK1-207ENST00000486239 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
DCLK1-207ENST00000486239 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 PROSER3Q2NL68 480 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 SUSD4Q5VX71 490 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 NUTM1Q86Y26 1132 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 XAGE3Q8WTP9 111 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 NLRP3Q96P20 1036 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 CRAMP1Q96RY5 1269 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 MBIPQ9NS73 344 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 CHPF2Q9P2E5 772 aa17.67■□□□□ 0.42
DCLK1-207ENST00000486239 SLC10A5Q5PT55 438 aa17.66■□□□□ 0.42
DCLK1-207ENST00000486239 DUSP27Q5VZP5 1158 aa17.66■□□□□ 0.42
DCLK1-207ENST00000486239 SMC1BQ8NDV3 1235 aa17.66■□□□□ 0.42
DCLK1-207ENST00000486239 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
DCLK1-207ENST00000486239 PRELPP51888 382 aa17.65■□□□□ 0.42
DCLK1-207ENST00000486239 TCIRG1Q13488 830 aa17.65■□□□□ 0.42
DCLK1-207ENST00000486239 PSMD1Q99460 953 aa17.65■□□□□ 0.42
DCLK1-207ENST00000486239 RRAGCQ9HB90 399 aa17.65■□□□□ 0.42
DCLK1-207ENST00000486239 SCN4AP35499 1836 aa17.65■□□□□ 0.42
DCLK1-207ENST00000486239 ANXA1P04083 346 aa17.64■□□□□ 0.41
DCLK1-207ENST00000486239 HSP90B1P14625 803 aaKnown RBP17.64■□□□□ 0.41
DCLK1-207ENST00000486239 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
DCLK1-207ENST00000486239 NLRP10Q86W26 655 aa17.64■□□□□ 0.41
DCLK1-207ENST00000486239 NECTIN2Q92692 538 aa17.64■□□□□ 0.41
DCLK1-207ENST00000486239 SH3TC1Q8TE82 1336 aa17.64■□□□□ 0.41
DCLK1-207ENST00000486239 LAMB2P55268 1798 aa17.63■□□□□ 0.41
DCLK1-207ENST00000486239 KRT24Q2M2I5 525 aa17.63■□□□□ 0.41
DCLK1-207ENST00000486239 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
DCLK1-207ENST00000486239 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
DCLK1-207ENST00000486239 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
DCLK1-207ENST00000486239 GOLGA2Q08379 1002 aa17.62■□□□□ 0.41
DCLK1-207ENST00000486239 IL16Q14005 1332 aa17.62■□□□□ 0.41
DCLK1-207ENST00000486239 SNED1Q8TER0 1413 aa17.62■□□□□ 0.41
DCLK1-207ENST00000486239 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
DCLK1-207ENST00000486239 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
DCLK1-207ENST00000486239 TMC4Q7Z404 712 aa17.61■□□□□ 0.41
DCLK1-207ENST00000486239 VPS33BQ9H267 617 aa17.61■□□□□ 0.41
DCLK1-207ENST00000486239 TRMT112Q9UI30 125 aaKnown RBP17.61■□□□□ 0.41
DCLK1-207ENST00000486239 DDX58O95786 925 aaKnown RBP17.6■□□□□ 0.41
DCLK1-207ENST00000486239 TRIM28Q13263 835 aaKnown RBP17.6■□□□□ 0.41
DCLK1-207ENST00000486239 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
DCLK1-207ENST00000486239 JDP2Q8WYK2 163 aa17.6■□□□□ 0.41
DCLK1-207ENST00000486239 CACNA1FO60840 1977 aa17.6■□□□□ 0.41
DCLK1-207ENST00000486239 DDX60Q8IY21 1712 aaKnown RBP17.59■□□□□ 0.41
DCLK1-207ENST00000486239 BBOX1O75936 387 aa17.59■□□□□ 0.41
DCLK1-207ENST00000486239 SUPT20HQ8NEM7 779 aa17.59■□□□□ 0.41
DCLK1-207ENST00000486239 L3MBTL3Q96JM7 780 aaPredicted RBP17.59■□□□□ 0.41
DCLK1-207ENST00000486239 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
DCLK1-207ENST00000486239 SYNE4Q8N205 404 aa17.58■□□□□ 0.4
DCLK1-207ENST00000486239 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.4
DCLK1-207ENST00000486239 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
DCLK1-207ENST00000486239 ATP6V0A2Q9Y487 856 aa17.58■□□□□ 0.4
DCLK1-207ENST00000486239 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
DCLK1-207ENST00000486239 WWC1Q8IX03 1113 aa17.57■□□□□ 0.4
DCLK1-207ENST00000486239 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
DCLK1-207ENST00000486239 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
DCLK1-207ENST00000486239 ABCC4O15439 1325 aa17.56■□□□□ 0.4
DCLK1-207ENST00000486239 FZD9O00144 591 aa17.56■□□□□ 0.4
DCLK1-207ENST00000486239 EIF6P56537 245 aaKnown RBP17.55■□□□□ 0.4
DCLK1-207ENST00000486239 GRAPQ13588 217 aa17.55■□□□□ 0.4
DCLK1-207ENST00000486239 GPC2Q8N158 579 aa17.55■□□□□ 0.4
DCLK1-207ENST00000486239 GRAPLQ8TC17 118 aaPredicted RBP17.55■□□□□ 0.4
DCLK1-207ENST00000486239 DDNO94850 711 aaPredicted RBP17.54■□□□□ 0.4
DCLK1-207ENST00000486239 CCDC184Q52MB2 194 aa17.54■□□□□ 0.4
DCLK1-207ENST00000486239 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
DCLK1-207ENST00000486239 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
DCLK1-207ENST00000486239 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
DCLK1-207ENST00000486239 CCDC191Q8NCU4 936 aa17.54■□□□□ 0.4
DCLK1-207ENST00000486239 HCLS1P14317 486 aaPredicted RBP17.53■□□□□ 0.4
DCLK1-207ENST00000486239 SF3B3Q15393 1217 aaKnown RBP17.53■□□□□ 0.4
DCLK1-207ENST00000486239 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
DCLK1-207ENST00000486239 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
DCLK1-207ENST00000486239 PNMA8AQ86V59 439 aaPredicted RBP17.53■□□□□ 0.4
DCLK1-207ENST00000486239 LDHDQ86WU2 507 aa17.53■□□□□ 0.4
DCLK1-207ENST00000486239 NIM1KQ8IY84 436 aa17.53■□□□□ 0.4
DCLK1-207ENST00000486239 LARGE2Q8N3Y3 721 aa17.53■□□□□ 0.4
DCLK1-207ENST00000486239 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
DCLK1-207ENST00000486239 RTFDC1Q9BY42 306 aaPredicted RBP17.53■□□□□ 0.4
DCLK1-207ENST00000486239 POTECB2RU33 542 aa17.52■□□□□ 0.4
DCLK1-207ENST00000486239 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
DCLK1-207ENST00000486239 DPP8Q6V1X1 898 aaPredicted RBP17.52■□□□□ 0.4
DCLK1-207ENST00000486239 HACL1Q9UJ83 578 aa17.52■□□□□ 0.4
DCLK1-207ENST00000486239 ZNF541Q9H0D2 1346 aa17.51■□□□□ 0.39
DCLK1-207ENST00000486239 ATP5J2-PTCD1G3V325 749 aa17.51■□□□□ 0.39
DCLK1-207ENST00000486239 PPIP5K2O43314 1243 aa17.51■□□□□ 0.39
DCLK1-207ENST00000486239 NEXNQ0ZGT2 675 aa17.51■□□□□ 0.39
DCLK1-207ENST00000486239 TWISTNBQ3B726 338 aaPredicted RBP17.51■□□□□ 0.39
DCLK1-207ENST00000486239 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
DCLK1-207ENST00000486239 CWC25Q9NXE8 425 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms