RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 MAP2K2P36507 400 aa11.56□□□□□ -0.56
XRN1-212ENST00000486211 SOX10P56693 466 aa11.56□□□□□ -0.56
XRN1-212ENST00000486211 BRIP1Q9BX63 1249 aa11.56□□□□□ -0.56
XRN1-212ENST00000486211 PDZRN3Q9UPQ7 1066 aa11.56□□□□□ -0.56
XRN1-212ENST00000486211 RNF123Q5XPI4 1314 aa11.56□□□□□ -0.56
XRN1-212ENST00000486211 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
XRN1-212ENST00000486211 CYP19A1P11511 503 aaPredicted RBP11.55□□□□□ -0.56
XRN1-212ENST00000486211 PDE6BP35913 854 aa11.55□□□□□ -0.56
XRN1-212ENST00000486211 GRM1Q13255 1194 aa11.55□□□□□ -0.56
XRN1-212ENST00000486211 CST9Q5W186 159 aa11.55□□□□□ -0.56
XRN1-212ENST00000486211 PRPF40BQ6NWY9 871 aaKnown RBP11.55□□□□□ -0.56
XRN1-212ENST00000486211 PAXIP1Q6ZW49 1069 aaPredicted RBP11.55□□□□□ -0.56
XRN1-212ENST00000486211 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
XRN1-212ENST00000486211 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
XRN1-212ENST00000486211 TLL2Q9Y6L7 1015 aa11.55□□□□□ -0.56
XRN1-212ENST00000486211 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
XRN1-212ENST00000486211 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
XRN1-212ENST00000486211 PRR5LQ6MZQ0 368 aa11.54□□□□□ -0.56
XRN1-212ENST00000486211 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
XRN1-212ENST00000486211 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
XRN1-212ENST00000486211 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
XRN1-212ENST00000486211 CACNA1SQ13698 1873 aa11.54□□□□□ -0.56
XRN1-212ENST00000486211 SOGA3Q5TF21 947 aa11.53□□□□□ -0.56
XRN1-212ENST00000486211 STYK1Q6J9G0 422 aa11.53□□□□□ -0.56
XRN1-212ENST00000486211 ZNF530Q6P9A1 599 aaPredicted RBP11.53□□□□□ -0.56
XRN1-212ENST00000486211 BICDL1Q6ZP65 573 aa11.53□□□□□ -0.56
XRN1-212ENST00000486211 CNKSR1Q969H4 720 aa11.53□□□□□ -0.56
XRN1-212ENST00000486211 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
XRN1-212ENST00000486211 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
XRN1-212ENST00000486211 TRPM7Q96QT4 1865 aa11.53□□□□□ -0.56
XRN1-212ENST00000486211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
XRN1-212ENST00000486211 ST20-MTHFSA0A0A6YYL1 179 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 FZD9O00144 591 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 SRGNP10124 158 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 HOXB3P14651 431 aaPredicted RBP11.52□□□□□ -0.57
XRN1-212ENST00000486211 MTHFSP49914 203 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 BRPF1P55201 1214 aaPredicted RBP11.52□□□□□ -0.57
XRN1-212ENST00000486211 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 TBC1D9BQ66K14 1250 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 ZFP91Q96JP5 570 aaPredicted RBP11.52□□□□□ -0.57
XRN1-212ENST00000486211 CARD14Q9BXL6 1004 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 ZNF277Q9NRM2 450 aaPredicted RBP11.52□□□□□ -0.57
XRN1-212ENST00000486211 POLKQ9UBT6 870 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 SCN7AQ01118 1682 aa11.52□□□□□ -0.57
XRN1-212ENST00000486211 TRAF5O00463 557 aa11.51□□□□□ -0.57
XRN1-212ENST00000486211 NEUROD1Q13562 356 aa11.51□□□□□ -0.57
XRN1-212ENST00000486211 PLEKHO1Q53GL0 409 aaPredicted RBP11.51□□□□□ -0.57
XRN1-212ENST00000486211 SCN11AQ9UI33 1791 aa11.5□□□□□ -0.57
XRN1-212ENST00000486211 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
XRN1-212ENST00000486211 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
XRN1-212ENST00000486211 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
XRN1-212ENST00000486211 GPC2Q8N158 579 aa11.5□□□□□ -0.57
XRN1-212ENST00000486211 TAOK2Q9UL54 1235 aa11.5□□□□□ -0.57
XRN1-212ENST00000486211 POTEB3A0JP26 581 aa11.49□□□□□ -0.57
XRN1-212ENST00000486211 ECM2O94769 699 aaPredicted RBP11.49□□□□□ -0.57
XRN1-212ENST00000486211 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
XRN1-212ENST00000486211 AMOTQ4VCS5 1084 aa11.49□□□□□ -0.57
XRN1-212ENST00000486211 CIAPIN1Q6FI81 312 aa11.49□□□□□ -0.57
XRN1-212ENST00000486211 POTEBQ6S5H4 581 aa11.49□□□□□ -0.57
XRN1-212ENST00000486211 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
XRN1-212ENST00000486211 HHIPL1Q96JK4 782 aa11.49□□□□□ -0.57
XRN1-212ENST00000486211 BCORQ6W2J9 1755 aa11.49□□□□□ -0.57
XRN1-212ENST00000486211 EIF5P55010 431 aaKnown RBP11.48□□□□□ -0.57
XRN1-212ENST00000486211 OLFM4Q6UX06 510 aa11.48□□□□□ -0.57
XRN1-212ENST00000486211 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
XRN1-212ENST00000486211 SNED1Q8TER0 1413 aa11.48□□□□□ -0.57
XRN1-212ENST00000486211 MRC1P22897 1456 aa11.48□□□□□ -0.57
XRN1-212ENST00000486211 COL4A5P29400 1685 aa11.48□□□□□ -0.57
XRN1-212ENST00000486211 IARSP41252 1262 aaKnown RBP11.47□□□□□ -0.57
XRN1-212ENST00000486211 SCNN1DP51172 638 aa11.47□□□□□ -0.57
XRN1-212ENST00000486211 C1orf141Q5JVX7 400 aa11.47□□□□□ -0.57
XRN1-212ENST00000486211 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
XRN1-212ENST00000486211 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
XRN1-212ENST00000486211 HOXB1P14653 301 aaPredicted RBP11.46□□□□□ -0.57
XRN1-212ENST00000486211 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
XRN1-212ENST00000486211 EPS15P42566 896 aa11.46□□□□□ -0.57
XRN1-212ENST00000486211 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
XRN1-212ENST00000486211 HABP4Q5JVS0 413 aaKnown RBP11.46□□□□□ -0.57
XRN1-212ENST00000486211 AEBP1Q8IUX7 1158 aa11.46□□□□□ -0.57
XRN1-212ENST00000486211 CNBD1Q8NA66 436 aa11.46□□□□□ -0.57
XRN1-212ENST00000486211 GCC1Q96CN9 775 aa11.46□□□□□ -0.57
XRN1-212ENST00000486211 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.57
XRN1-212ENST00000486211 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
XRN1-212ENST00000486211 UBR2Q8IWV8 1755 aa11.45□□□□□ -0.58
XRN1-212ENST00000486211 A0A087WZG4 1122 aa11.44□□□□□ -0.58
XRN1-212ENST00000486211 KLRG2A4D1S0 409 aaPredicted RBP11.44□□□□□ -0.58
XRN1-212ENST00000486211 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
XRN1-212ENST00000486211 CELF2O95319 508 aaKnown RBP11.44□□□□□ -0.58
XRN1-212ENST00000486211 USP50Q70EL3 339 aaPredicted RBP11.44□□□□□ -0.58
XRN1-212ENST00000486211 RTKN2Q8IZC4 609 aa11.44□□□□□ -0.58
XRN1-212ENST00000486211 SYNE4Q8N205 404 aa11.44□□□□□ -0.58
XRN1-212ENST00000486211 MS4A4AQ96JQ5 239 aa11.44□□□□□ -0.58
XRN1-212ENST00000486211 LMOD1P29536 600 aaPredicted RBP11.43□□□□□ -0.58
XRN1-212ENST00000486211 ST5P78524 1137 aa11.43□□□□□ -0.58
XRN1-212ENST00000486211 NOGQ13253 232 aa11.43□□□□□ -0.58
XRN1-212ENST00000486211 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
XRN1-212ENST00000486211 KRTAP3-2Q9BYR7 98 aa11.43□□□□□ -0.58
XRN1-212ENST00000486211 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
XRN1-212ENST00000486211 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms