RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 NLRP10Q86W26 655 aa21.56■■□□□ 1.04
CCHCR1-214ENST00000486060 PLBD2Q8NHP8 589 aa21.56■■□□□ 1.04
CCHCR1-214ENST00000486060 C7orf43Q8WVR3 580 aa21.56■■□□□ 1.04
CCHCR1-214ENST00000486060 HYPKQ9NX55 129 aa21.56■■□□□ 1.04
CCHCR1-214ENST00000486060 NPR1P16066 1061 aa21.55■■□□□ 1.04
CCHCR1-214ENST00000486060 GTF2E1P29083 439 aaPredicted RBP21.55■■□□□ 1.04
CCHCR1-214ENST00000486060 PARP10Q53GL7 1025 aa21.55■■□□□ 1.04
CCHCR1-214ENST00000486060 SYNE4Q8N205 404 aa21.55■■□□□ 1.04
CCHCR1-214ENST00000486060 CNKSR1Q969H4 720 aa21.55■■□□□ 1.04
CCHCR1-214ENST00000486060 ZNF428Q96B54 188 aa21.55■■□□□ 1.04
CCHCR1-214ENST00000486060 ANKRD13DQ6ZTN6 518 aa21.54■■□□□ 1.04
CCHCR1-214ENST00000486060 RNF181Q9P0P0 153 aa21.54■■□□□ 1.04
CCHCR1-214ENST00000486060 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
CCHCR1-214ENST00000486060 OLFM4Q6UX06 510 aa21.53■■□□□ 1.04
CCHCR1-214ENST00000486060 PPP1R42Q7Z4L9 355 aa21.53■■□□□ 1.04
CCHCR1-214ENST00000486060 WDR63Q8IWG1 891 aa21.53■■□□□ 1.04
CCHCR1-214ENST00000486060 ISCA1Q9BUE6 129 aa21.53■■□□□ 1.04
CCHCR1-214ENST00000486060 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.04
CCHCR1-214ENST00000486060 HSP90AB3PQ58FF7 597 aa21.52■■□□□ 1.04
CCHCR1-214ENST00000486060 SLC10A5Q5PT55 438 aa21.52■■□□□ 1.04
CCHCR1-214ENST00000486060 SLC51AQ86UW1 340 aa21.52■■□□□ 1.04
CCHCR1-214ENST00000486060 UTP14AQ9BVJ6 771 aaKnown RBP21.52■■□□□ 1.04
CCHCR1-214ENST00000486060 SNED1Q8TER0 1413 aa21.52■■□□□ 1.04
CCHCR1-214ENST00000486060 GPBP1L1Q9HC44 474 aaPredicted RBP21.51■■□□□ 1.03
CCHCR1-214ENST00000486060 ZNF521Q96K83 1311 aa21.51■■□□□ 1.03
CCHCR1-214ENST00000486060 ATP5J2-PTCD1G3V325 749 aa21.5■■□□□ 1.03
CCHCR1-214ENST00000486060 TWISTNBQ3B726 338 aaPredicted RBP21.5■■□□□ 1.03
CCHCR1-214ENST00000486060 CCDC30Q5VVM6 783 aa21.5■■□□□ 1.03
CCHCR1-214ENST00000486060 COL4A1P02462 1669 aa21.5■■□□□ 1.03
CCHCR1-214ENST00000486060 LMNB1P20700 586 aa21.49■■□□□ 1.03
CCHCR1-214ENST00000486060 HOXA10P31260 410 aaPredicted RBP21.49■■□□□ 1.03
CCHCR1-214ENST00000486060 HCLS1P14317 486 aaPredicted RBP21.48■■□□□ 1.03
CCHCR1-214ENST00000486060 LTBP3Q9NS15 1303 aa21.48■■□□□ 1.03
CCHCR1-214ENST00000486060 KIF3CO14782 793 aa21.47■■□□□ 1.03
CCHCR1-214ENST00000486060 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
CCHCR1-214ENST00000486060 G2E3Q7L622 706 aa21.47■■□□□ 1.03
CCHCR1-214ENST00000486060 TRMT112Q9UI30 125 aaKnown RBP21.47■■□□□ 1.03
CCHCR1-214ENST00000486060 RNF123Q5XPI4 1314 aa21.47■■□□□ 1.03
CCHCR1-214ENST00000486060 VAMP4O75379 141 aa21.46■■□□□ 1.03
CCHCR1-214ENST00000486060 C1QTNF8P60827 252 aa21.46■■□□□ 1.03
CCHCR1-214ENST00000486060 RIC3Q7Z5B4 369 aa21.46■■□□□ 1.03
CCHCR1-214ENST00000486060 NMRK2Q9NPI5 230 aa21.46■■□□□ 1.03
CCHCR1-214ENST00000486060 MYH3P11055 1940 aa21.46■■□□□ 1.03
CCHCR1-214ENST00000486060 ALDH1B1P30837 517 aa21.45■■□□□ 1.02
CCHCR1-214ENST00000486060 GOLGA2Q08379 1002 aa21.45■■□□□ 1.02
CCHCR1-214ENST00000486060 TRIM28Q13263 835 aaKnown RBP21.45■■□□□ 1.02
CCHCR1-214ENST00000486060 NLRP3Q96P20 1036 aa21.45■■□□□ 1.02
CCHCR1-214ENST00000486060 CRAMP1Q96RY5 1269 aa21.45■■□□□ 1.02
CCHCR1-214ENST00000486060 TAOK3Q9H2K8 898 aa21.45■■□□□ 1.02
CCHCR1-214ENST00000486060 SH3TC1Q8TE82 1336 aa21.45■■□□□ 1.02
CCHCR1-214ENST00000486060 CCDC93Q567U6 631 aa21.44■■□□□ 1.02
CCHCR1-214ENST00000486060 RPGRQ92834 1020 aaKnown RBP21.44■■□□□ 1.02
CCHCR1-214ENST00000486060 FAM89AQ96GI7 184 aa21.44■■□□□ 1.02
CCHCR1-214ENST00000486060 MYD88Q99836 296 aa21.44■■□□□ 1.02
CCHCR1-214ENST00000486060 LRRC37AA6NMS7 1700 aa21.43■■□□□ 1.02
CCHCR1-214ENST00000486060 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
CCHCR1-214ENST00000486060 SOGA3Q5TF21 947 aa21.43■■□□□ 1.02
CCHCR1-214ENST00000486060 ABCC4O15439 1325 aa21.42■■□□□ 1.02
CCHCR1-214ENST00000486060 SLC4A2P04920 1241 aa21.42■■□□□ 1.02
CCHCR1-214ENST00000486060 COL4A5P29400 1685 aa21.42■■□□□ 1.02
CCHCR1-214ENST00000486060 RBM17Q96I25 401 aaKnown RBP21.42■■□□□ 1.02
CCHCR1-214ENST00000486060 METTL22Q9BUU2 404 aaPredicted RBP21.42■■□□□ 1.02
CCHCR1-214ENST00000486060 ZC3H4Q9UPT8 1303 aaKnown RBP21.42■■□□□ 1.02
CCHCR1-214ENST00000486060 MAP3K2Q9Y2U5 619 aa21.42■■□□□ 1.02
CCHCR1-214ENST00000486060 WDR90Q96KV7 1748 aa21.41■■□□□ 1.02
CCHCR1-214ENST00000486060 PI4KAP2A4QPH2 592 aa21.41■■□□□ 1.02
CCHCR1-214ENST00000486060 RTL5Q5HYW3 569 aaPredicted RBP21.41■■□□□ 1.02
CCHCR1-214ENST00000486060 PI4KAP1Q8N8J0 262 aa21.41■■□□□ 1.02
CCHCR1-214ENST00000486060 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
CCHCR1-214ENST00000486060 FKBP4Q02790 459 aaKnown RBP eCLIP21.4■■□□□ 1.02
CCHCR1-214ENST00000486060 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
CCHCR1-214ENST00000486060 CHMP4AQ9BY43 222 aa21.4■■□□□ 1.02
CCHCR1-214ENST00000486060 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
CCHCR1-214ENST00000486060 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
CCHCR1-214ENST00000486060 ZNF277Q9NRM2 450 aaPredicted RBP21.39■■□□□ 1.01
CCHCR1-214ENST00000486060 SPEF2Q9C093 1822 aa21.39■■□□□ 1.01
CCHCR1-214ENST00000486060 PPEF1O14829 653 aaPredicted RBP21.38■■□□□ 1.01
CCHCR1-214ENST00000486060 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
CCHCR1-214ENST00000486060 RTKN2Q8IZC4 609 aa21.38■■□□□ 1.01
CCHCR1-214ENST00000486060 MYH16Q9H6N6 1097 aa21.38■■□□□ 1.01
CCHCR1-214ENST00000486060 GLTPD2A6NH11 291 aa21.37■■□□□ 1.01
CCHCR1-214ENST00000486060 FLIIQ13045 1269 aa21.37■■□□□ 1.01
CCHCR1-214ENST00000486060 SF3B3Q15393 1217 aaKnown RBP21.37■■□□□ 1.01
CCHCR1-214ENST00000486060 ZBTB38Q8NAP3 1195 aaPredicted RBP21.37■■□□□ 1.01
CCHCR1-214ENST00000486060 CCDC191Q8NCU4 936 aa21.37■■□□□ 1.01
CCHCR1-214ENST00000486060 RRAGCQ9HB90 399 aa21.37■■□□□ 1.01
CCHCR1-214ENST00000486060 LTBP1Q14766 1721 aa21.37■■□□□ 1.01
CCHCR1-214ENST00000486060 KDM2BQ8NHM5 1336 aa21.36■■□□□ 1.01
CCHCR1-214ENST00000486060 IRS4O14654 1257 aaPredicted RBP21.36■■□□□ 1.01
CCHCR1-214ENST00000486060 DUOX1Q9NRD9 1551 aa21.36■■□□□ 1.01
CCHCR1-214ENST00000486060 POTECB2RU33 542 aa21.35■■□□□ 1.01
CCHCR1-214ENST00000486060 PCCAP05165 728 aaPredicted RBP21.35■■□□□ 1.01
CCHCR1-214ENST00000486060 MIER1Q8N108 512 aa21.35■■□□□ 1.01
CCHCR1-214ENST00000486060 PSMD1Q99460 953 aa21.35■■□□□ 1.01
CCHCR1-214ENST00000486060 CWC25Q9NXE8 425 aaPredicted RBP21.35■■□□□ 1.01
CCHCR1-214ENST00000486060 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
CCHCR1-214ENST00000486060 GRAPQ13588 217 aa21.34■■□□□ 1.01
CCHCR1-214ENST00000486060 CWF19L2Q2TBE0 894 aaKnown RBP21.34■■□□□ 1.01
CCHCR1-214ENST00000486060 CC2D2BQ6DHV5 1058 aa21.34■■□□□ 1.01
CCHCR1-214ENST00000486060 GRAPLQ8TC17 118 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms