RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 SALL2Q9Y467 1007 aaPredicted RBP25.32■■□□□ 1.64
SNX5-213ENST00000486039 TNRC6CQ9HCJ0 1690 aaKnown RBP25.32■■□□□ 1.64
SNX5-213ENST00000486039 TCIRG1Q13488 830 aa25.31■■□□□ 1.64
SNX5-213ENST00000486039 HSP90AB3PQ58FF7 597 aa25.31■■□□□ 1.64
SNX5-213ENST00000486039 IL16Q14005 1332 aa25.31■■□□□ 1.64
SNX5-213ENST00000486039 SLX4Q8IY92 1834 aa25.3■■□□□ 1.64
SNX5-213ENST00000486039 CRY2Q49AN0 593 aa25.3■■□□□ 1.64
SNX5-213ENST00000486039 ANKRD13DQ6ZTN6 518 aa25.3■■□□□ 1.64
SNX5-213ENST00000486039 PLBD2Q8NHP8 589 aa25.3■■□□□ 1.64
SNX5-213ENST00000486039 RIC1Q4ADV7 1423 aa25.29■■□□□ 1.64
SNX5-213ENST00000486039 GLTPD2A6NH11 291 aa25.29■■□□□ 1.64
SNX5-213ENST00000486039 NLRP10Q86W26 655 aa25.29■■□□□ 1.64
SNX5-213ENST00000486039 C7orf43Q8WVR3 580 aa25.29■■□□□ 1.64
SNX5-213ENST00000486039 UTP14AQ9BVJ6 771 aaKnown RBP25.29■■□□□ 1.64
SNX5-213ENST00000486039 PHAXQ9H814 394 aaKnown RBP25.28■■□□□ 1.64
SNX5-213ENST00000486039 ARFGEF2Q9Y6D5 1785 aa25.27■■□□□ 1.64
SNX5-213ENST00000486039 FSTL1Q12841 308 aa25.27■■□□□ 1.64
SNX5-213ENST00000486039 C3orf67Q6ZVT6 689 aa25.27■■□□□ 1.64
SNX5-213ENST00000486039 CCDC88AQ3V6T2 1871 aa25.27■■□□□ 1.64
SNX5-213ENST00000486039 SLC10A5Q5PT55 438 aa25.26■■□□□ 1.63
SNX5-213ENST00000486039 WDR63Q8IWG1 891 aa25.26■■□□□ 1.63
SNX5-213ENST00000486039 ANKRD36CQ5JPF3 1778 aa25.26■■□□□ 1.63
SNX5-213ENST00000486039 CACNA1SQ13698 1873 aa25.26■■□□□ 1.63
SNX5-213ENST00000486039 ALDH1B1P30837 517 aa25.25■■□□□ 1.63
SNX5-213ENST00000486039 CCDC30Q5VVM6 783 aa25.25■■□□□ 1.63
SNX5-213ENST00000486039 ISCA1Q9BUE6 129 aa25.25■■□□□ 1.63
SNX5-213ENST00000486039 FER1L6Q2WGJ9 1857 aa25.24■■□□□ 1.63
SNX5-213ENST00000486039 TIAM2Q8IVF5 1701 aa25.24■■□□□ 1.63
SNX5-213ENST00000486039 SOGA3Q5TF21 947 aa25.24■■□□□ 1.63
SNX5-213ENST00000486039 SYNE4Q8N205 404 aa25.24■■□□□ 1.63
SNX5-213ENST00000486039 RNF123Q5XPI4 1314 aa25.23■■□□□ 1.63
SNX5-213ENST00000486039 LTBP3Q9NS15 1303 aa25.23■■□□□ 1.63
SNX5-213ENST00000486039 FANCIQ9NVI1 1328 aa25.23■■□□□ 1.63
SNX5-213ENST00000486039 VEGFAP15692 232 aaPredicted RBP25.23■■□□□ 1.63
SNX5-213ENST00000486039 HOXA10P31260 410 aaPredicted RBP25.23■■□□□ 1.63
SNX5-213ENST00000486039 OLFM4Q6UX06 510 aa25.23■■□□□ 1.63
SNX5-213ENST00000486039 ZNF428Q96B54 188 aa25.23■■□□□ 1.63
SNX5-213ENST00000486039 TAOK3Q9H2K8 898 aa25.23■■□□□ 1.63
SNX5-213ENST00000486039 TRMT112Q9UI30 125 aaKnown RBP25.23■■□□□ 1.63
SNX5-213ENST00000486039 ATP5J2-PTCD1G3V325 749 aa25.22■■□□□ 1.63
SNX5-213ENST00000486039 TWISTNBQ3B726 338 aaPredicted RBP25.22■■□□□ 1.63
SNX5-213ENST00000486039 DNAJC5GQ8N7S2 189 aa25.22■■□□□ 1.63
SNX5-213ENST00000486039 RPGRQ92834 1020 aaKnown RBP25.22■■□□□ 1.63
SNX5-213ENST00000486039 NLRP3Q96P20 1036 aa25.22■■□□□ 1.63
SNX5-213ENST00000486039 CHMP4AQ9BY43 222 aa25.22■■□□□ 1.63
SNX5-213ENST00000486039 SPINK5Q9NQ38 1064 aaPredicted RBP25.22■■□□□ 1.63
SNX5-213ENST00000486039 CCDC93Q567U6 631 aa25.21■■□□□ 1.63
SNX5-213ENST00000486039 DPY19L2Q6NUT2 758 aa25.21■■□□□ 1.63
SNX5-213ENST00000486039 RIC3Q7Z5B4 369 aa25.21■■□□□ 1.63
SNX5-213ENST00000486039 SMC1BQ8NDV3 1235 aa25.21■■□□□ 1.63
SNX5-213ENST00000486039 SH3TC1Q8TE82 1336 aa25.2■■□□□ 1.62
SNX5-213ENST00000486039 TCERG1O14776 1098 aaKnown RBP25.2■■□□□ 1.62
SNX5-213ENST00000486039 HCLS1P14317 486 aaPredicted RBP25.2■■□□□ 1.62
SNX5-213ENST00000486039 GOLGA2Q08379 1002 aa25.2■■□□□ 1.62
SNX5-213ENST00000486039 RBM17Q96I25 401 aaKnown RBP25.2■■□□□ 1.62
SNX5-213ENST00000486039 CRAMP1Q96RY5 1269 aa25.19■■□□□ 1.62
SNX5-213ENST00000486039 DICER1Q9UPY3 1922 aaKnown RBP25.19■■□□□ 1.62
SNX5-213ENST00000486039 WDR90Q96KV7 1748 aa25.18■■□□□ 1.62
SNX5-213ENST00000486039 TRIM28Q13263 835 aaKnown RBP25.18■■□□□ 1.62
SNX5-213ENST00000486039 POTECB2RU33 542 aa25.16■■□□□ 1.62
SNX5-213ENST00000486039 SLC51AQ86UW1 340 aa25.16■■□□□ 1.62
SNX5-213ENST00000486039 RTKN2Q8IZC4 609 aa25.16■■□□□ 1.62
SNX5-213ENST00000486039 SNED1Q8TER0 1413 aa25.16■■□□□ 1.62
SNX5-213ENST00000486039 FAM89AQ96GI7 184 aa25.16■■□□□ 1.62
SNX5-213ENST00000486039 MYD88Q99836 296 aa25.16■■□□□ 1.62
SNX5-213ENST00000486039 STK31Q9BXU1 1019 aa25.16■■□□□ 1.62
SNX5-213ENST00000486039 VAMP4O75379 141 aa25.15■■□□□ 1.62
SNX5-213ENST00000486039 HTRA3P83110 453 aa25.15■■□□□ 1.62
SNX5-213ENST00000486039 FKBP4Q02790 459 aaKnown RBP eCLIP25.15■■□□□ 1.62
SNX5-213ENST00000486039 EXOSC9Q06265 439 aaKnown RBP25.15■■□□□ 1.62
SNX5-213ENST00000486039 ZNF521Q96K83 1311 aa25.14■■□□□ 1.62
SNX5-213ENST00000486039 DDX58O95786 925 aaKnown RBP25.14■■□□□ 1.62
SNX5-213ENST00000486039 G2E3Q7L622 706 aa25.14■■□□□ 1.62
SNX5-213ENST00000486039 ABCC4O15439 1325 aa25.13■■□□□ 1.61
SNX5-213ENST00000486039 PPEF1O14829 653 aaPredicted RBP25.13■■□□□ 1.61
SNX5-213ENST00000486039 SLC4A2P04920 1241 aa25.13■■□□□ 1.61
SNX5-213ENST00000486039 METTL22Q9BUU2 404 aaPredicted RBP25.13■■□□□ 1.61
SNX5-213ENST00000486039 RTL5Q5HYW3 569 aaPredicted RBP25.12■■□□□ 1.61
SNX5-213ENST00000486039 CC2D2BQ6DHV5 1058 aa25.12■■□□□ 1.61
SNX5-213ENST00000486039 KSR2Q6VAB6 950 aa25.12■■□□□ 1.61
SNX5-213ENST00000486039 ZNF277Q9NRM2 450 aaPredicted RBP25.12■■□□□ 1.61
SNX5-213ENST00000486039 MAP3K2Q9Y2U5 619 aa25.12■■□□□ 1.61
SNX5-213ENST00000486039 LAMB2P55268 1798 aa25.11■■□□□ 1.61
SNX5-213ENST00000486039 PI4KAP2A4QPH2 592 aa25.11■■□□□ 1.61
SNX5-213ENST00000486039 PI4KAP1Q8N8J0 262 aa25.11■■□□□ 1.61
SNX5-213ENST00000486039 CCER2I3L3R5 266 aa25.1■■□□□ 1.61
SNX5-213ENST00000486039 DDNO94850 711 aaPredicted RBP25.1■■□□□ 1.61
SNX5-213ENST00000486039 ZBTB38Q8NAP3 1195 aaPredicted RBP25.1■■□□□ 1.61
SNX5-213ENST00000486039 CCDC191Q8NCU4 936 aa25.1■■□□□ 1.61
SNX5-213ENST00000486039 KLRG1Q96E93 195 aa25.1■■□□□ 1.61
SNX5-213ENST00000486039 PSMD1Q99460 953 aa25.1■■□□□ 1.61
SNX5-213ENST00000486039 MYH16Q9H6N6 1097 aa25.1■■□□□ 1.61
SNX5-213ENST00000486039 DDX60Q8IY21 1712 aaKnown RBP25.09■■□□□ 1.61
SNX5-213ENST00000486039 IRS4O14654 1257 aaPredicted RBP25.08■■□□□ 1.61
SNX5-213ENST00000486039 SF3B3Q15393 1217 aaKnown RBP25.08■■□□□ 1.61
SNX5-213ENST00000486039 DDX46Q7L014 1031 aaKnown RBP25.08■■□□□ 1.61
SNX5-213ENST00000486039 ATP6V0A2Q9Y487 856 aa25.08■■□□□ 1.61
SNX5-213ENST00000486039 BBOX1O75936 387 aa25.07■■□□□ 1.6
SNX5-213ENST00000486039 IGKV5-2P06315 115 aa25.07■■□□□ 1.6
SNX5-213ENST00000486039 IARSP41252 1262 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms