RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 PDE3BQ13370 1112 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 PLEKHO1Q53GL0 409 aaPredicted RBP7.44□□□□□ -1.22
COPS3-208ENST00000486032 TRIM47Q96LD4 638 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 RSPH6AQ9H0K4 717 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 ATP13A2Q9NQ11 1180 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 RRP7AQ9Y3A4 280 aaKnown RBP7.44□□□□□ -1.22
COPS3-208ENST00000486032 RREB1Q92766 1687 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 NUP188Q5SRE5 1749 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 NCAPD2Q15021 1401 aa7.44□□□□□ -1.22
COPS3-208ENST00000486032 KCNQ2O43526 872 aa7.43□□□□□ -1.22
COPS3-208ENST00000486032 FCHSD2O94868 740 aa7.43□□□□□ -1.22
COPS3-208ENST00000486032 GMPRP36959 345 aa7.43□□□□□ -1.22
COPS3-208ENST00000486032 MTHFSDQ2M296 383 aaKnown RBP7.43□□□□□ -1.22
COPS3-208ENST00000486032 PLA2G2CQ5R387 149 aa7.43□□□□□ -1.22
COPS3-208ENST00000486032 ZNF530Q6P9A1 599 aaPredicted RBP7.43□□□□□ -1.22
COPS3-208ENST00000486032 ZCRB1Q8TBF4 217 aaKnown RBP7.43□□□□□ -1.22
COPS3-208ENST00000486032 PHACTR3Q96KR7 559 aa7.43□□□□□ -1.22
COPS3-208ENST00000486032 PNNQ9H307 717 aaKnown RBP7.43□□□□□ -1.22
COPS3-208ENST00000486032 SPG7Q9UQ90 795 aa7.43□□□□□ -1.22
COPS3-208ENST00000486032 NHSQ6T4R5 1651 aa7.43□□□□□ -1.22
COPS3-208ENST00000486032 PKD1L3Q7Z443 1732 aa7.43□□□□□ -1.22
COPS3-208ENST00000486032 C1orf141Q5JVX7 400 aa7.42□□□□□ -1.22
COPS3-208ENST00000486032 RUNDC1Q96C34 613 aa7.42□□□□□ -1.22
COPS3-208ENST00000486032 ACSBG1Q96GR2 724 aa7.42□□□□□ -1.22
COPS3-208ENST00000486032 YTHDC1Q96MU7 727 aaKnown RBP7.42□□□□□ -1.22
COPS3-208ENST00000486032 CDCA7Q9BWT1 371 aaPredicted RBP7.42□□□□□ -1.22
COPS3-208ENST00000486032 OVOS2A0A0G2JMS6 1433 aa7.42□□□□□ -1.22
COPS3-208ENST00000486032 BTAF1O14981 1849 aa7.41□□□□□ -1.22
COPS3-208ENST00000486032 APAF1O14727 1248 aa7.41□□□□□ -1.22
COPS3-208ENST00000486032 EZH2Q15910 746 aaKnown RBP7.41□□□□□ -1.22
COPS3-208ENST00000486032 AMOTQ4VCS5 1084 aa7.41□□□□□ -1.22
COPS3-208ENST00000486032 KCTD17Q8N5Z5 321 aa7.41□□□□□ -1.22
COPS3-208ENST00000486032 GAS2L2Q8NHY3 880 aa7.41□□□□□ -1.22
COPS3-208ENST00000486032 PLEKHF1Q96S99 279 aa7.41□□□□□ -1.22
COPS3-208ENST00000486032 KDRP35968 1356 aa7.41□□□□□ -1.22
COPS3-208ENST00000486032 KAT6BQ8WYB5 2073 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 CYP27B1O15528 508 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 ADH1BP00325 375 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 PHKG2P15735 406 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 RIPK4P57078 832 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 DCTN1Q14203 1278 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 NFE2L2Q16236 605 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 MPRIPQ6WCQ1 1025 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 IFNL2Q8IZJ0 200 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 RTF1Q92541 710 aaKnown RBP7.4□□□□□ -1.22
COPS3-208ENST00000486032 SYTL4Q96C24 671 aaPredicted RBP7.4□□□□□ -1.22
COPS3-208ENST00000486032 PCDH11XQ9BZA7 1347 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 PCDH11YQ9BZA8 1340 aa7.4□□□□□ -1.22
COPS3-208ENST00000486032 GNAT3A8MTJ3 354 aa7.39□□□□□ -1.23
COPS3-208ENST00000486032 TMPOP42166 694 aaKnown RBP7.39□□□□□ -1.23
COPS3-208ENST00000486032 KCNQ4P56696 695 aa7.39□□□□□ -1.23
COPS3-208ENST00000486032 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
COPS3-208ENST00000486032 AKAP4Q5JQC9 854 aa7.39□□□□□ -1.23
COPS3-208ENST00000486032 MCM10Q7L590 875 aa7.39□□□□□ -1.23
COPS3-208ENST00000486032 IRF7Q92985 503 aa7.39□□□□□ -1.23
COPS3-208ENST00000486032 KIFC2Q96AC6 838 aa7.39□□□□□ -1.23
COPS3-208ENST00000486032 THUMPD2Q9BTF0 503 aaKnown RBP7.39□□□□□ -1.23
COPS3-208ENST00000486032 SLC6A16Q9GZN6 736 aa7.39□□□□□ -1.23
COPS3-208ENST00000486032 LAS1LQ9Y4W2 734 aaKnown RBP7.39□□□□□ -1.23
COPS3-208ENST00000486032 PAPPAQ13219 1627 aa7.38□□□□□ -1.23
COPS3-208ENST00000486032 MAP3K5Q99683 1374 aa7.38□□□□□ -1.23
COPS3-208ENST00000486032 CAMK2BQ13554 666 aa7.38□□□□□ -1.23
COPS3-208ENST00000486032 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
COPS3-208ENST00000486032 PDGFDQ9GZP0 370 aaPredicted RBP7.38□□□□□ -1.23
COPS3-208ENST00000486032 LGR6Q9HBX8 967 aa7.38□□□□□ -1.23
COPS3-208ENST00000486032 RBM27Q9P2N5 1060 aaKnown RBP7.38□□□□□ -1.23
COPS3-208ENST00000486032 ITGB4P16144 1822 aa7.37□□□□□ -1.23
COPS3-208ENST00000486032 TUBGCP6Q96RT7 1819 aa7.37□□□□□ -1.23
COPS3-208ENST00000486032 RNMTO43148 476 aaKnown RBP7.37□□□□□ -1.23
COPS3-208ENST00000486032 APBA3O96018 575 aa7.37□□□□□ -1.23
COPS3-208ENST00000486032 HSP90AB1P08238 724 aaKnown RBP7.37□□□□□ -1.23
COPS3-208ENST00000486032 RPIAP49247 311 aa7.37□□□□□ -1.23
COPS3-208ENST00000486032 PRIM1P49642 420 aaKnown RBP7.37□□□□□ -1.23
COPS3-208ENST00000486032 TEFQ10587 303 aa7.37□□□□□ -1.23
COPS3-208ENST00000486032 FAM196AQ6ZSG2 479 aa7.37□□□□□ -1.23
COPS3-208ENST00000486032 NXF1Q9UBU9 619 aaKnown RBP7.37□□□□□ -1.23
COPS3-208ENST00000486032 DLG5Q8TDM6 1919 aa7.37□□□□□ -1.23
COPS3-208ENST00000486032 BCL9O00512 1426 aa7.36□□□□□ -1.23
COPS3-208ENST00000486032 KDM6AO15550 1401 aaPredicted RBP7.36□□□□□ -1.23
COPS3-208ENST00000486032 TTC24A2A3L6 582 aaPredicted RBP7.36□□□□□ -1.23
COPS3-208ENST00000486032 CD2BP2O95400 341 aaKnown RBP7.36□□□□□ -1.23
COPS3-208ENST00000486032 CABP4P57796 275 aa7.36□□□□□ -1.23
COPS3-208ENST00000486032 LMOD3Q0VAK6 560 aa7.36□□□□□ -1.23
COPS3-208ENST00000486032 KCNMA1Q12791 1236 aa7.36□□□□□ -1.23
COPS3-208ENST00000486032 IL17REQ8NFR9 667 aa7.36□□□□□ -1.23
COPS3-208ENST00000486032 RGPD3A6NKT7 1758 aaPredicted RBP7.36□□□□□ -1.23
COPS3-208ENST00000486032 RGPD4Q7Z3J3 1758 aa7.36□□□□□ -1.23
COPS3-208ENST00000486032 SMIM5Q71RC9 77 aa7.35□□□□□ -1.23
COPS3-208ENST00000486032 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
COPS3-208ENST00000486032 DCAF5Q96JK2 942 aa7.35□□□□□ -1.23
COPS3-208ENST00000486032 LRRC4BQ9NT99 713 aa7.35□□□□□ -1.23
COPS3-208ENST00000486032 TMOD3Q9NYL9 352 aa7.35□□□□□ -1.23
COPS3-208ENST00000486032 MIS18AQ9NYP9 233 aa7.35□□□□□ -1.23
COPS3-208ENST00000486032 VIRMAQ69YN4 1812 aaKnown RBP7.35□□□□□ -1.23
COPS3-208ENST00000486032 LY75O60449 1722 aa7.35□□□□□ -1.23
COPS3-208ENST00000486032 CASZ1Q86V15 1759 aa7.34□□□□□ -1.23
COPS3-208ENST00000486032 BAG6P46379 1132 aa7.34□□□□□ -1.23
COPS3-208ENST00000486032 SLC39A6Q13433 755 aa7.34□□□□□ -1.23
COPS3-208ENST00000486032 SF3B2Q13435 895 aaKnown RBP7.34□□□□□ -1.23
COPS3-208ENST00000486032 R3HDM1Q15032 1099 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms