RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
HMG20B-211ENST00000486028 NTSR2O95665 410 aa15.95■□□□□ 0.14
HMG20B-211ENST00000486028 SRGNP10124 158 aa15.95■□□□□ 0.14
HMG20B-211ENST00000486028 YY1P25490 414 aa15.95■□□□□ 0.14
HMG20B-211ENST00000486028 STYK1Q6J9G0 422 aa15.95■□□□□ 0.14
HMG20B-211ENST00000486028 MASTLQ96GX5 879 aa15.95■□□□□ 0.14
HMG20B-211ENST00000486028 ISCA1Q9BUE6 129 aa15.95■□□□□ 0.14
HMG20B-211ENST00000486028 RNF123Q5XPI4 1314 aa15.94■□□□□ 0.14
HMG20B-211ENST00000486028 ATP5J2-PTCD1G3V325 749 aa15.94■□□□□ 0.14
HMG20B-211ENST00000486028 NPR1P16066 1061 aa15.94■□□□□ 0.14
HMG20B-211ENST00000486028 TRIM28Q13263 835 aaKnown RBP15.94■□□□□ 0.14
HMG20B-211ENST00000486028 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
HMG20B-211ENST00000486028 ARHGAP27Q6ZUM4 889 aa15.94■□□□□ 0.14
HMG20B-211ENST00000486028 CNKSR1Q969H4 720 aa15.94■□□□□ 0.14
HMG20B-211ENST00000486028 CDCA7LQ96GN5 454 aa15.94■□□□□ 0.14
HMG20B-211ENST00000486028 TRMT112Q9UI30 125 aaKnown RBP15.94■□□□□ 0.14
HMG20B-211ENST00000486028 PI4KAP2A4QPH2 592 aa15.93■□□□□ 0.14
HMG20B-211ENST00000486028 SLC10A5Q5PT55 438 aa15.93■□□□□ 0.14
HMG20B-211ENST00000486028 G2E3Q7L622 706 aa15.93■□□□□ 0.14
HMG20B-211ENST00000486028 PI4KAP1Q8N8J0 262 aa15.93■□□□□ 0.14
HMG20B-211ENST00000486028 ABCC12Q96J65 1359 aa15.92■□□□□ 0.14
HMG20B-211ENST00000486028 HNRNPUQ00839 825 aaKnown RBP eCLIP15.92■□□□□ 0.14
HMG20B-211ENST00000486028 FLIIQ13045 1269 aa15.92■□□□□ 0.14
HMG20B-211ENST00000486028 TRMT2AQ8IZ69 625 aaKnown RBP15.92■□□□□ 0.14
HMG20B-211ENST00000486028 NLRP3Q96P20 1036 aa15.92■□□□□ 0.14
HMG20B-211ENST00000486028 MYD88Q99836 296 aa15.92■□□□□ 0.14
HMG20B-211ENST00000486028 METTL22Q9BUU2 404 aaPredicted RBP15.92■□□□□ 0.14
HMG20B-211ENST00000486028 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
HMG20B-211ENST00000486028 SH3TC1Q8TE82 1336 aa15.92■□□□□ 0.14
HMG20B-211ENST00000486028 UTRNP46939 3433 aa15.91■□□□□ 0.14
HMG20B-211ENST00000486028 NEXNQ0ZGT2 675 aa15.91■□□□□ 0.14
HMG20B-211ENST00000486028 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
HMG20B-211ENST00000486028 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
HMG20B-211ENST00000486028 ALDH1B1P30837 517 aa15.9■□□□□ 0.14
HMG20B-211ENST00000486028 CRY2Q49AN0 593 aa15.9■□□□□ 0.14
HMG20B-211ENST00000486028 CCDC191Q8NCU4 936 aa15.9■□□□□ 0.14
HMG20B-211ENST00000486028 RPGRQ92834 1020 aaKnown RBP15.9■□□□□ 0.14
HMG20B-211ENST00000486028 ZNF428Q96B54 188 aa15.9■□□□□ 0.14
HMG20B-211ENST00000486028 RIC1Q4ADV7 1423 aa15.9■□□□□ 0.14
HMG20B-211ENST00000486028 HCLS1P14317 486 aaPredicted RBP15.89■□□□□ 0.13
HMG20B-211ENST00000486028 PRPF40BQ6NWY9 871 aaKnown RBP15.89■□□□□ 0.13
HMG20B-211ENST00000486028 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
HMG20B-211ENST00000486028 CWC25Q9NXE8 425 aaPredicted RBP15.89■□□□□ 0.13
HMG20B-211ENST00000486028 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
HMG20B-211ENST00000486028 ADCY9O60503 1353 aa15.88■□□□□ 0.13
HMG20B-211ENST00000486028 C21orf2O43822 256 aa15.88■□□□□ 0.13
HMG20B-211ENST00000486028 HSP90B1P14625 803 aaKnown RBP15.88■□□□□ 0.13
HMG20B-211ENST00000486028 HOXA10P31260 410 aaPredicted RBP15.88■□□□□ 0.13
HMG20B-211ENST00000486028 SYNE4Q8N205 404 aa15.88■□□□□ 0.13
HMG20B-211ENST00000486028 ZBTB38Q8NAP3 1195 aaPredicted RBP15.88■□□□□ 0.13
HMG20B-211ENST00000486028 RBM17Q96I25 401 aaKnown RBP15.88■□□□□ 0.13
HMG20B-211ENST00000486028 CT47B1P0C2W7 299 aaPredicted RBP15.87■□□□□ 0.13
HMG20B-211ENST00000486028 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
HMG20B-211ENST00000486028 DNAAF4Q8WXU2 420 aa15.87■□□□□ 0.13
HMG20B-211ENST00000486028 CRAMP1Q96RY5 1269 aa15.87■□□□□ 0.13
HMG20B-211ENST00000486028 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
HMG20B-211ENST00000486028 CHD4Q14839 1912 aa15.87■□□□□ 0.13
HMG20B-211ENST00000486028 CACNA1FO60840 1977 aa15.87■□□□□ 0.13
HMG20B-211ENST00000486028 ANKRD36CQ5JPF3 1778 aa15.87■□□□□ 0.13
HMG20B-211ENST00000486028 DLEC1Q9Y238 1755 aa15.86■□□□□ 0.13
HMG20B-211ENST00000486028 PCCAP05165 728 aaPredicted RBP15.86■□□□□ 0.13
HMG20B-211ENST00000486028 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
HMG20B-211ENST00000486028 C3orf67Q6ZVT6 689 aa15.86■□□□□ 0.13
HMG20B-211ENST00000486028 ARFGEF2Q9Y6D5 1785 aa15.85■□□□□ 0.13
HMG20B-211ENST00000486028 ARFGEF1Q9Y6D6 1849 aa15.85■□□□□ 0.13
HMG20B-211ENST00000486028 IRS4O14654 1257 aaPredicted RBP15.85■□□□□ 0.13
HMG20B-211ENST00000486028 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
HMG20B-211ENST00000486028 MRPL50Q8N5N7 158 aaKnown RBP15.85■□□□□ 0.13
HMG20B-211ENST00000486028 C7orf43Q8WVR3 580 aa15.85■□□□□ 0.13
HMG20B-211ENST00000486028 SSH1Q8WYL5 1049 aa15.85■□□□□ 0.13
HMG20B-211ENST00000486028 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
HMG20B-211ENST00000486028 NEURL1BA8MQ27 555 aa15.84■□□□□ 0.13
HMG20B-211ENST00000486028 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
HMG20B-211ENST00000486028 DDX46Q7L014 1031 aaKnown RBP15.84■□□□□ 0.13
HMG20B-211ENST00000486028 LINS1Q8NG48 757 aa15.84■□□□□ 0.13
HMG20B-211ENST00000486028 SF3B3Q15393 1217 aaKnown RBP15.83■□□□□ 0.12
HMG20B-211ENST00000486028 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
HMG20B-211ENST00000486028 CCDC93Q567U6 631 aa15.83■□□□□ 0.12
HMG20B-211ENST00000486028 C9orf131Q5VYM1 1079 aa15.83■□□□□ 0.12
HMG20B-211ENST00000486028 F6X3S4 739 aa15.82■□□□□ 0.12
HMG20B-211ENST00000486028 BBOX1O75936 387 aa15.82■□□□□ 0.12
HMG20B-211ENST00000486028 GCKRQ14397 625 aa15.82■□□□□ 0.12
HMG20B-211ENST00000486028 CC2D2BQ6DHV5 1058 aa15.82■□□□□ 0.12
HMG20B-211ENST00000486028 RTKN2Q8IZC4 609 aa15.82■□□□□ 0.12
HMG20B-211ENST00000486028 JARID2Q92833 1246 aaPredicted RBP15.82■□□□□ 0.12
HMG20B-211ENST00000486028 TMX4Q9H1E5 349 aaPredicted RBP15.82■□□□□ 0.12
HMG20B-211ENST00000486028 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
HMG20B-211ENST00000486028 TNRC6CQ9HCJ0 1690 aaKnown RBP15.82■□□□□ 0.12
HMG20B-211ENST00000486028 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
HMG20B-211ENST00000486028 H7C1W4 665 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 NFKBIEO00221 500 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 PDE8AO60658 829 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 PTPRCP08575 1304 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 LMNB1P20700 586 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 RASSF7Q02833 373 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 GRIPAP1Q4V328 841 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 ZBED9Q6R2W3 1325 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 ZNF784Q8NCA9 323 aaPredicted RBP15.81■□□□□ 0.12
HMG20B-211ENST00000486028 BCL2L13Q9BXK5 485 aa15.81■□□□□ 0.12
HMG20B-211ENST00000486028 TAOK3Q9H2K8 898 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms